| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 975,198 | T→A | 5.8% | intergenic (+44/+125) | ycfJ → / ← suhB | flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 975,198 | 0 | T | A | 5.8% | 1303.1 / 5.6 | 464 | intergenic (+44/+125) | ycfJ/suhB | flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase |
| Reads supporting (aligned to +/- strand): ref base T (225/187); new base A (31/6); total (263/201) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.43e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 475 total aligned reads displayed.
TTCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGG > NC_002947/975049‑975347 | ttCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCt > 1:6510733/1‑150 (MQ=255) tCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTa > 1:4501130/1‑150 (MQ=255) aTCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAg > 2:1170190/1‑150 (MQ=255) aTCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAg > 2:6209045/1‑150 (MQ=255) aTCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCCATCCTAAAg > 1:105196/1‑150 (MQ=255) aTCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCGTCGCGGGTAAACCCCATACTACAg > 1:916430/1‑150 (MQ=255) tCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAgg > 2:6725657/1‑150 (MQ=255) tCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAgg < 2:1277082/150‑1 (MQ=255) cGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAggg < 1:6065158/150‑1 (MQ=255) cGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAggg < 1:4224701/150‑1 (MQ=255) gATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTAGCGGGTAAACCCGATACAACAGGGGCaa > 1:2455019/1‑150 (MQ=255) cAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGc < 1:6386873/150‑1 (MQ=255) cAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGc < 2:3488509/150‑1 (MQ=255) ggTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGa < 1:8651736/150‑1 (MQ=255) ggTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGa > 2:838935/1‑150 (MQ=255) ggTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGa < 2:328555/150‑1 (MQ=255) gTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGAt > 1:3418789/1‑150 (MQ=255) tAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATc < 2:4602239/150‑1 (MQ=255) tAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATc < 2:8200055/150‑1 (MQ=255) ggCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCCAACCAACAGGGGCAATGCGATCCa > 1:8404321/1‑150 (MQ=255) ggTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAg > 2:5443672/1‑150 (MQ=255) tGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGa < 2:3343336/150‑1 (MQ=255) aGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCg > 2:2434916/1‑150 (MQ=255) tGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGt < 2:6465952/150‑1 (MQ=255) tGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGt < 1:5132382/150‑1 (MQ=255) tGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGt < 1:2348384/150‑1 (MQ=255) ggATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAAAGCGATACAAGTAGGAGCGGGtt > 2:2592910/1‑150 (MQ=255) gATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGtt‑t > 1:5674230/1‑150 (MQ=255) tCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TAc > 1:2127409/1‑150 (MQ=255) tCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TAc > 1:8496049/1‑150 (MQ=255) gcgAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGTTT‑TAccc < 2:2101804/150‑1 (MQ=255) gcgAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TAccc < 2:7227056/150‑1 (MQ=255) gcgAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TAccc < 1:7994174/150‑1 (MQ=255) gcgAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TAccc < 2:6577893/150‑1 (MQ=255) cgAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTAAAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCcg > 2:2173372/1‑150 (MQ=255) gCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTA‑AACCcgctc < 1:38842/150‑3 (MQ=255) gCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCAACAGGGGCAATGCGATCCAAGTAGGAGCGGGTT‑TACCCGCGa > 1:6160954/1‑150 (MQ=255) ggATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAagag > 2:4297434/1‑150 (MQ=255) ggATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAagag > 2:4464925/1‑150 (MQ=255) gATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAAAGCGATCCATGTAGGTGCGGGGT‑TTACCGCGAAGTgg > 1:1734530/1‑150 (MQ=39) tCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAAAGCGATCCATGTAGGAGCGGGTT‑TACCCGCGACGAGGTc > 1:4791955/1‑150 (MQ=255) cGACCTTTCCGCTGGACAAGAAGGGAAAGCTGATTCTGCGCTAAGCGGGTCAGTGTTTTGGGGTGTGTGTGCGGGCCTCTTCGCGGGTAAACCCGATCCAACCGGGGCAATGCGATCATTTTTGGAGGGGTTT‑TACCCGCGAAGAGGTCg < 2:2688328/150‑1 (MQ=25) gACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAAACCGAACCAAAAGGGGGAAGGCGATCCCTGTAGGGGCGGGGT‑TAACCCCGAAGAGGGCgg > 1:3728119/1‑150 (MQ=255) aCCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGt > 2:3748673/1‑150 (MQ=255) ccATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTAGCGGGTAAAACCCAACCGACAGGGGCAATGCGAAGCATGGAGGTGCGGGTTGTACCC‑CGGAGAGGTCggga > 1:1469529/1‑148 (MQ=255) ttCCGCTGGACAAGCTGGGCACGCTGATTCGGCGCGACGGGGGTCTGTGATTTGGGGTGTCTGGGCCGGCCTCTGCGGGGGTAACCCCGCCCCTACCGGGGCAATGCGACCCATGTCGGCGCGGGTT‑TACCCGCGAAGAGGTCGGTACAg < 2:7620768/150‑1 (MQ=255) gCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCCATCCTACACGGGCAAAGCGATCCATGTAGGAGCGGGTT‑TACCCCCGAAGAGGGCGGTACAGGccc > 1:6652203/1‑149 (MQ=38) tGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACg > 2:4983203/1‑150 (MQ=255) aaGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCaaaa > 2:1714872/1‑150 (MQ=255) aaGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCaaaa > 2:8050599/1‑150 (MQ=255) cgaggggCATGCTGTTTCTGCGCGATGGGGTTCTGTTATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGTTAAACCCGATCCTACCGGGGAATTGCTATCATTGTAGGAGGGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAac < 2:904176/145‑1 (MQ=255) gAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAacc > 1:4373093/1‑150 (MQ=255) gAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCATAGCGGGTAAAACCCAAACAAAACGGGCCAAGCGAAACAAGGAGGAGCGGGGT‑TAACCCCGAAGAGGTCGGGACAGGCCACCCAAAacc > 1:8129695/1‑150 (MQ=255) aTGGCAAGCTGATTCTGCGCGACGCGGGTCTGTGTTTGGCGGTGTCGGGGCCGGCCTCTTCGCGGGTAACCCCGATCCGCCCGGGGCAATGCGACCCATGTAGGAGCGGTTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAaccac < 2:5536926/150‑1 (MQ=255) ggCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAAccacca > 2:4780911/1‑150 (MQ=255) aaGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGc > 2:7898948/1‑150 (MQ=255) gCTTATTCTGAGCGACGGGGGTCTGTGATTTGGGGTGTGTGTGCCGGCCTCTTCGGGGTTAAACCCGATCCTACCGGGGAAATGCGATCCATGTCGGAGCGGTTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGcac < 2:3232770/150‑1 (MQ=255) aTTCTGAGCGACGCGGGTCTGTGATTGGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACaaaa < 2:4166449/150‑1 (MQ=255) aTTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACaaaa > 1:1261319/1‑150 (MQ=255) tCTGAGCGACGGGGGTCTGTGTTTTGGGGTGTCTGGGCCGGCCTCTTCGGGGGTAACCCCGATCCTACCGGGCCATTGGGATCCTTGTTGGTGGGGTTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACaaaaaa < 2:1512947/150‑1 (MQ=255) tCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAAACCGAAACTACCCGGGCAAAGCGAACCATGTTGGTGCGGGTT‑TAACCCCGCAGAGGTCGGTAAACGCCACCCCAAAACACCACGCCCaaaaaa > 1:7586744/1‑150 (MQ=255) cTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAg < 2:8704169/150‑1 (MQ=255) tGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTTCAGGCCACGCAAAAACACCAGGCACAAAAAAGc > 1:2874807/1‑150 (MQ=255) tGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGc > 2:1597905/1‑150 (MQ=255) cgCGAAGCGGGTCAGTGTTTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTCCCGGGGCAATGCGATCCTTGTTGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCAc < 1:7307455/149‑1 (MQ=37) gacgggggTCTGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACCGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTc < 2:7763900/145‑1 (MQ=255) gAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTTAACCCGATCCAACAGGGGCCAGGCGATCCCGGGTGGGGCGGGGT‑TACCCCCGCAGAGGGCGGGTCAGGCCACCCCAAACCACCACGCACAAAAAAGCAccac > 1:2509883/1‑148 (MQ=255) gCGGGTCTTTTATTTGGGGTATCTGTGCCGGCCTCTTCGCGGTTAAACCCGATCCTACAGGGGCAATGCGATCCATGTTGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAag < 2:1877224/150‑1 (MQ=37) cGGGTCAGTGTTTTGCGGTGGCTGTGCCGGCCTCTTCGGGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAaga < 2:7145757/150‑1 (MQ=255) tatgtGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCTAGCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCTTGAGGTGCtttt < 2:6390501/146‑1 (MQ=38) aTTTGCGGTGTCTGTGCGGGCCTCTTCGGGGTTAACCCCGATCCTCCAGGGGCTATGCGATCCTTGTTGGAGCGGTTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCttttt < 2:2531769/150‑1 (MQ=255) tttGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGAGCCTACCGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCTTGAGGTGCtttttt < 2:5106445/150‑2 (MQ=255) tttGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGAACCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTtttg > 2:5976719/1‑150 (MQ=255) tgCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATc > 2:7316959/1‑150 (MQ=255) gCCGGCCTCTTCGCGGGTAACCCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCt < 2:3620475/150‑1 (MQ=255) ggCCTCTTCGCGGGTAAAACCCAAACAAAAGGGGCAATGCGATACATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACATGCCACGCAAAAACACCAGGCCCAAAAAATCACCACAAGAGGTGCTTTTTGTTTGCCGGCAATCTgcg > 1:4095306/1‑150 (MQ=37) gCCTCTTCGCGGTTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTgcgc < 2:1969799/150‑1 (MQ=255) tctTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGtt < 1:7183230/56‑1 (MQ=255) tCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAgcg > 2:8022734/1‑150 (MQ=255) tCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAgcg > 1:7463556/1‑150 (MQ=255) cgggggTAAACCCGTTCCTACTGGGGCATTGCGATCCTTGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAgcgc < 2:5227241/147‑1 (MQ=39) cgcgGGTAAACCCGATCCTACCGGGGCAATGCGATCCATGTCGGCGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAgcgc < 2:105196/150‑1 (MQ=255) cgcgGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAgcgc > 1:332892/1‑150 (MQ=255) gcgGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCt > 2:7444078/1‑150 (MQ=255) cgGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCtt > 2:6970464/1‑150 (MQ=255) ggccaCCCGATCCTACCGGGGCAATGCGATCCATGTAGGAGCGGTTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCAt < 2:5662363/146‑1 (MQ=255) gTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCAt > 2:2836921/1‑150 (MQ=255) tAAACCTGATCCTCACGGGTAAATGCTATCCTTTTTGGTGGGTTTT‑TACCCGCGAAGAGGTCGGTACAGGCCTCGCTTAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATg < 1:629370/150‑1 (MQ=255) aCCCTATCCTACGGGGGCAAGGCTATCATTTTTGGCGCGGGTT‑ACCCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCtt < 1:5499501/150‑1 (MQ=255) cccGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCttt > 2:6150014/1‑150 (MQ=255) cccGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCttt > 1:7580055/1‑150 (MQ=255) ccGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTc > 2:7520089/1‑150 (MQ=255) ccGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTc > 1:3561661/1‑150 (MQ=255) ccGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTc > 1:1938511/1‑150 (MQ=255) cGATCCCACTGGGGCATGGCGATCCTTTTTGGGGGGGTTT‑TCCCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCt < 1:5332776/150‑1 (MQ=255) taTCCTCCTGGGGAATGGCGATCATTGTTGGTGCGGTTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTg < 1:7730565/149‑1 (MQ=255) cacccTACTGGGGCATTGCTATCCTTGTTGGTGCGGTTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTg < 1:2653252/147‑1 (MQ=255) aTCCTCCCGGGGAATTGCGAACCTTGTAGGAGGGGTTT‑AACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTgg < 1:4851708/150‑1 (MQ=255) tCCTACCGGGCAAATGCTATCCTTTTAGGCGCGGTTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGc < 1:6984311/150‑1 (MQ=255) tACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAgg > 2:5746079/1‑150 (MQ=255) | TTCCATCGGTGATCAGGTAGGCAAGGTGAAGATGGATCGCGAGCCGGGATCGACCATTCCGCTGGACAAGAATGGCAAGCTGATTCTGAGCGAAGCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTT‑TACCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGCTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGG > NC_002947/975049‑975347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |