| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 975,291 | A→T | 5.1% | intergenic (+137/+32) | ycfJ → / ← suhB | flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 975,291 | 0 | A | T | 5.1% | 1795.0 / 54.8 | 577 | intergenic (+137/+32) | ycfJ/suhB | flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase |
| Reads supporting (aligned to +/- strand): ref base A (297/242); new base T (20/10); total (319/258) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.70e-01 | |||||||||||
Only 100 of 596 total aligned reads displayed.
GCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGCCACCGTTGAAG > NC_002947/975143‑975440 | tttttttGGGTTGTCTGTGCCGGCCTCTCCGGGGCTAAACCCTAGCCTCCGGGGGAAAGGCCACCATTGTCGCCG‑GGGTTTACCCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑tt < 1:2300458/146‑1 (MQ=255) tttGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACCGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACCGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTtttg > 2:242033/1‑150 (MQ=255) ggggTGTCTGTGCGGGCCTCTGCGCGGGAAACCCCGAGCCTCCCGGGGCAATGCTACCCTTGTCGGTGCGGTTTAC‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTtttgttt < 1:4894526/148‑1 (MQ=255) gtttCTGTGCCGGCCTCGCCGGGGGTACACCCTACCCTACCGGGGCAATGCGATCCATGTCGGAGGGGTTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGcc < 1:7585026/147‑1 (MQ=255) gtCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACTGGGGCAATGCGATCCATTTAGGAGCGGTTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCgg < 2:6194891/150‑1 (MQ=255) tgCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATc > 2:7316959/1‑150 (MQ=255) gCCGGCCTCTTCGCGGGTAACCCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCt < 2:3620475/150‑1 (MQ=255) ccTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCAATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCt > 1:2722935/1‑150 (MQ=255) tctTCGCGGGTAAACCCGATCCTACCGGGGCAATGCTATCCCTGTCGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTa < 2:2757516/150‑1 (MQ=255) tctTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTa > 1:7487451/1‑150 (MQ=255) ttCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAgc < 2:1956309/150‑1 (MQ=255) gcgGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCt > 2:7444078/1‑150 (MQ=255) gcgGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCt > 1:445460/1‑150 (MQ=255) ggTAAACCCGATCCTACCGGGGCATTGCTATCCTTGTAGGCGCGGTTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCa < 1:6481844/150‑1 (MQ=255) gTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCAt > 2:4528620/1‑150 (MQ=255) cccGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTTGCGCTTCATGCttt > 2:1079106/1‑150 (MQ=255) cccGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCttt > 2:3333971/1‑150 (MQ=255) ccGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTc > 1:3561661/1‑150 (MQ=255) ccGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTc > 1:1938511/1‑150 (MQ=255) ccGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTc > 2:7520089/1‑150 (MQ=255) cGATCCTACCGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCt < 2:5638168/150‑1 (MQ=255) tCCTACCGGGCAAATGCTATCCTTTTAGGCGCGGTTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGc < 1:6984311/150‑1 (MQ=255) tACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAgg > 2:5745613/1‑150 (MQ=255) aCAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGt > 1:2897963/1‑150 (MQ=255) cAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTg > 2:7151560/1‑150 (MQ=255) gCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTGTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCt > 2:1578130/1‑150 (MQ=255) aTGCTACCCATGTAGGAGGGTTTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGa < 1:6210192/150‑1 (MQ=255) aTGCCATCCAGGTTGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGa < 1:5080605/150‑1 (MQ=255) tGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCACTCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGAt > 2:4701368/1‑150 (MQ=255) tGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGAt > 2:306222/1‑150 (MQ=255) tGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGAt < 2:8019194/150‑1 (MQ=255) gCGAGCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCCAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATg < 1:7885903/150‑1 (MQ=255) cGATCCCTGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATgg < 2:2127409/150‑1 (MQ=255) cGATCCATTTAGGAGCGTGTTTA‑CCCGCGAAGTGGTCGGTACAGGCCACGCAAAACCACCAGGCTCAAAAAAGCACCTCAAGATGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCTATTCATGCTTTCTGGCAGGTGCGGCTGGAttg < 2:6593910/150‑3 (MQ=255) tGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGcagtcag > 2:8770328/1‑150 (MQ=255) tGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGcagtcag > 2:1214277/1‑150 (MQ=255) tAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCGGGTGCGGCTGGATGGCAGTCAGTa > 1:600205/1‑150 (MQ=255) ggAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAACAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTAcc < 1:8047559/150‑1 (MQ=255) tttA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGaa < 2:5077370/150‑1 (MQ=255) tttA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGaa < 1:6391016/150‑1 (MQ=255) tttA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGaa < 2:77115/150‑1 (MQ=255) gttaccccGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGa < 1:3695959/145‑1 (MQ=255) a‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCa < 1:6725657/150‑1 (MQ=255) ccGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCCTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACt > 1:181100/1‑150 (MQ=255) cgAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGGTTGCCGGCAATCTGAGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGACAGTCAGTACCGCCTTGAAGCACTTGa > 1:3261995/1‑150 (MQ=255) aaGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCAGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATg > 1:4133219/1‑150 (MQ=255) agagGTCTGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTTC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGt < 1:4578202/150‑1 (MQ=255) agagGTCGGTACAGGCCACGCAAAACCACCAGGCTCATAATAGCACCTCTAGAGGTTC‑TTTTTGTTTGCCGGCTATCTGCGCTTAGCGCTTCATGCTTTCTGGGAGGTGCGGCTTGATGGCAGTCTGTACCGCCTTTAAGCACTTGATGt < 1:6126953/150‑1 (MQ=255) ggTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGc < 2:8496049/150‑1 (MQ=255) ggTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGc < 1:8263695/150‑1 (MQ=255) gTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGcc > 1:4722465/1‑150 (MQ=255) gTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGcc > 2:6104364/1‑150 (MQ=255) tACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCaa < 1:8415467/150‑1 (MQ=255) tACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCaa > 2:5522330/1‑150 (MQ=255) aGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGa > 2:6746914/1‑150 (MQ=255) ggCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGAt < 2:1847443/150‑1 (MQ=255) ggCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGAt > 1:101710/1‑150 (MQ=255) ggCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGAt < 1:5146041/150‑1 (MQ=255) gCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGAtg > 1:7984572/1‑150 (MQ=255) cACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGAtgtg > 1:5602833/1‑150 (MQ=255) aCGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTgg < 2:5423545/150‑1 (MQ=255) aCGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCAGGCAAcatcaagt < 2:3578679/150‑8 (MQ=255) gCAAAACCACCAGGCACAAAAAAGCACCTCCAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGcagtca < 2:8297834/107‑1 (MQ=255) gCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTgcgc < 1:8493832/63‑1 (MQ=255) gCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGcc > 2:5206728/1‑150 (MQ=255) gCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGcc > 1:555314/1‑150 (MQ=255) gCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGcc > 1:7251634/1‑150 (MQ=255) aaaaCCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCtt > 1:5338478/1‑150 (MQ=255) aaaCCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCttt < 2:2477411/150‑1 (MQ=255) accaccAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACg > 1:7467078/1‑137 (MQ=255) accaccAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGt < 2:3903525/150‑1 (MQ=255) ccaccaGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTc < 2:4827536/150‑1 (MQ=255) ccaccaGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTc < 1:1377261/150‑1 (MQ=255) ccaGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAg < 1:5816041/150‑1 (MQ=255) ccaGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAg > 1:6649197/1‑150 (MQ=255) caGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAgg > 2:8066697/1‑150 (MQ=255) ggCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGaa < 2:699584/150‑1 (MQ=255) gcaaacaaaaaGCACCTCTTGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGaa > 1:3836570/7‑150 (MQ=255) gCACAAATAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCAGTTGATGTTGCCTGCTACGATGTGGCGTTTGTCGAGGAAg > 2:8653532/1‑150 (MQ=255) cacaAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACg > 1:8354370/1‑128 (MQ=255) caaaaaGCACCTCTTGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGt > 1:2155796/2‑150 (MQ=255) aaaaaaGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACtt < 2:6861568/109‑1 (MQ=255) aaaaaaGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGt > 1:1256066/1‑150 (MQ=255) aaaaaaGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGt < 2:3418789/150‑1 (MQ=255) aaaaaaGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGt > 2:6470402/1‑150 (MQ=255) aaaaaGCACCTCTTGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTc > 1:8716521/1‑138 (MQ=255) aaaaaGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTg < 1:1540829/150‑1 (MQ=255) aaaaaGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTg < 2:1500294/150‑1 (MQ=255) aaaaaGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTg < 2:4373093/150‑1 (MQ=255) aaaaaGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTg > 1:2586049/1‑150 (MQ=255) aaaGCACCTCTTGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGc > 2:3207114/1‑150 (MQ=255) aaaGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGc < 1:4297434/150‑1 (MQ=255) aaaGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGc > 2:2535466/1‑150 (MQ=255) aaGCACCTCTTGAGGTGCTTTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGc > 1:3401128/1‑150 (MQ=255) cTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGCCACCGtt > 2:5961549/1‑150 (MQ=255) cTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGCCACCGtt > 2:1283260/1‑150 (MQ=255) cTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGCCACCGtt < 2:6324934/150‑1 (MQ=255) tCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGCCACCGTTg > 2:4240552/1‑150 (MQ=255) tCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGCCACCGTTg > 2:7599201/1‑150 (MQ=255) tCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGCCACCGTTg < 1:8801240/150‑1 (MQ=255) | GCGGGTCAGTGATTTGCGGTGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGATCCTACAGGGGCAATGCGATCCATGTAGGAGCGGGTTTA‑CCCGCGAAGAGGTCGGTACAGGCCACGCAAAACCACCAGGCACAAAAAAGCACCTCAAGAGGTGC‑TTTTTGTTTGCCGGCAATCTGCGCTTAGCGCTTCATGCTTTCTGGCAGGTGCGGCTGGATGGCAGTCAGTACCGCCTTGAAGCACTTGATGTTGCCTGCAACGATGTGGCCTTTGTCGAGGAAGTCGTGGCCACCGTTGAAG > NC_002947/975143‑975440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |