Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 983,587 A→T 5.0% intergenic (+42/‑47) iscX → / → ndk cysteine desulfurase activity regulator/nucleoside diphosphate kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947983,5870AT 5.0% 2596.1 / 76.9 766intergenic (+42/‑47)iscX/ndkcysteine desulfurase activity regulator/nucleoside diphosphate kinase
Reads supporting (aligned to +/- strand):  ref base A (366/360);  new base T (22/17);  total (389/377)
Fisher's exact test for biased strand distribution p-value = 5.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.10e-01

Only 100 of 797 total aligned reads displayed.

CTGCACCGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGCCTGAAAATCG  >  NC_002947/983438‑983736
                                                                                                                                                     |                                                                                                                                                     
  gCACCGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAAt                                                                                                                                                     >  2:5284671/1‑150 (MQ=255)
  gCACCGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAAt                                                                                                                                                     >  1:5725168/1‑150 (MQ=255)
     ccGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTcg                                                                                                                                                  >  1:5867903/1‑150 (MQ=255)
      cGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTcgc                                                                                                                                                 <  2:7805322/150‑1 (MQ=255)
       gCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTcgcg                                                                                                                                                <  1:702902/150‑1 (MQ=255)
        cTGGGTGCTGGCATTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCgg                                                                                                                                               <  2:758015/150‑1 (MQ=255)
                tGGCATTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGAATTATACGCGGGttccggg                                                                                                                                       <  2:5020875/150‑6 (MQ=255)
                   cATTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAAttttt                                                                                                                                    <  2:7031284/150‑1 (MQ=255)
                    aTTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTc                                                                                                                                   <  2:7283506/150‑1 (MQ=255)
                    aTTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTc                                                                                                                                   >  1:7721851/1‑150 (MQ=255)
                      tGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGt                                                                                                                                 <  2:3149538/150‑1 (MQ=255)
                        ccAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTaa                                                                                                                               >  2:1901553/1‑150 (MQ=255)
                        ccAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTaa                                                                                                                               >  1:4303432/1‑150 (MQ=255)
                        ccAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTaa                                                                                                                               >  1:857291/1‑150 (MQ=255)
                         cAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAac                                                                                                                              >  2:3829059/1‑150 (MQ=255)
                            agTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGGCTAATTCGCGGGTTTAATTTTTCGTAACACt                                                                                                                           >  1:6480059/1‑150 (MQ=255)
                             gTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTc                                                                                                                          >  1:8024874/1‑150 (MQ=255)
                              ttCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCa                                                                                                                         >  2:4033305/1‑150 (MQ=255)
                                cAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAAGTCGCGGGGTTAATTTTTCGTAACACTCata                                                                                                                       >  1:8633964/1‑150 (MQ=255)
                                    gacgaTCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCt                                                                                                                   <  2:6441639/150‑1 (MQ=255)
                                     acgaTCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTg                                                                                                                  <  2:6822247/150‑1 (MQ=255)
                                       gttgcGTCTCGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCGTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCGCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCTTAACACTCATATTCTGGa                                                                                                                <  1:8147355/146‑1 (MQ=255)
                                       gaTCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGa                                                                                                                <  2:5465824/150‑1 (MQ=255)
                                       gaTCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGa                                                                                                                <  1:7443629/150‑1 (MQ=255)
                                       gaTCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGa                                                                                                                <  1:3286156/150‑1 (MQ=255)
                                       gaTCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGa                                                                                                                <  1:5580496/150‑1 (MQ=255)
                                            gTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGtttt                                                                                                           <  2:3362052/150‑1 (MQ=255)
                                            gTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGtttt                                                                                                           >  2:2975767/1‑150 (MQ=255)
                                             tCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTc                                                                                                          <  2:2861052/150‑1 (MQ=255)
                                             tCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTc                                                                                                          >  2:4953965/1‑150 (MQ=255)
                                                  cggcggTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATgg                                                                                                     <  2:4488570/150‑1 (MQ=255)
                                                      ggTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGt                                                                                                 >  1:4783586/1‑150 (MQ=255)
                                                      ggTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGt                                                                                                 >  1:7176686/1‑150 (MQ=255)
                                                        tGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCGCTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTc                                                                                               >  1:1194758/1‑150 (MQ=255)
                                                                   tCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtc                                                                                    >  1:549322/1‑150 (MQ=255)
                                                                   tCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtc                                                                                    >  2:4157686/1‑150 (MQ=255)
                                                                   tCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtc                                                                                    >  1:2931588/1‑150 (MQ=255)
                                                                   tCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtc                                                                                    >  2:4622812/1‑150 (MQ=255)
                                                                     gAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTCTAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtctc                                                                                  >  1:753107/1‑150 (MQ=255)
                                                                     gAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtctc                                                                                  >  1:5321551/1‑150 (MQ=255)
                                                                     gAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtctc                                                                                  >  1:2039952/1‑150 (MQ=255)
                                                                     gAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtctc                                                                                  <  2:1309070/150‑1 (MQ=255)
                                                                     gAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtctc                                                                                  >  2:6591733/1‑150 (MQ=255)
                                                                     gAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtctc                                                                                  <  1:7292005/150‑1 (MQ=255)
                                                                       ggCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAAGTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCca                                                                                >  2:7994630/1‑150 (MQ=255)
                                                                        gCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCcat                                                                               >  1:690185/1‑150 (MQ=255)
                                                                        gCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCcat                                                                               <  1:6716359/150‑1 (MQ=255)
                                                                         cAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCcatc                                                                              <  2:6165309/150‑1 (MQ=255)
                                                                          aaTCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAAACCCCCGCAACCCGCGTATAATTCGCCGGTTTAATTTTACGAAACACTCATATTCTGGAGTTTTCCATGCCTGTTCAACGTACATACTCcatca                                                                             >  2:1782029/1‑150 (MQ=255)
                                                                            tCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCatcatc                                                                           <  1:2431874/150‑1 (MQ=255)
                                                                               aGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAg                                                                        >  1:5053288/1‑150 (MQ=255)
                                                                               aGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAg                                                                        >  1:2170541/1‑150 (MQ=255)
                                                                                ggCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGc                                                                       <  1:3941801/150‑1 (MQ=255)
                                                                                ggCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGc                                                                       <  1:7251624/150‑1 (MQ=255)
                                                                                 gccgccTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGcc                                                                      >  1:6548250/1‑150 (MQ=255)
                                                                                     ccTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGAc                                                                  <  1:3159623/150‑1 (MQ=255)
                                                                                     ccTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGAc                                                                  <  2:218721/150‑1 (MQ=255)
                                                                                           tCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGtt                                                            >  1:4102576/1‑150 (MQ=255)
                                                                                           tCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGtt                                                            <  2:8658232/150‑1 (MQ=255)
                                                                                            cgacgaAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTg                                                           <  1:8809896/150‑1 (MQ=255)
                                                                                             gacgaAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGc                                                          <  2:8765453/150‑1 (MQ=255)
                                                                                               cgaAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCa                                                        >  2:3716490/1‑150 (MQ=255)
                                                                                                gaAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCaa                                                       <  1:447765/150‑1 (MQ=255)
                                                                                                  aGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCaaaa                                                     <  1:188513/150‑1 (MQ=255)
                                                                                                       aCTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTc                                                <  1:8233921/150‑1 (MQ=255)
                                                                                                         tAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCAt                                              <  2:8195353/150‑1 (MQ=255)
                                                                                                           aGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCg                                            <  2:432076/150‑1 (MQ=255)
                                                                                                             cGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGc                                          <  1:4680994/150‑1 (MQ=255)
                                                                                                             cGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGc                                          <  2:1002386/150‑1 (MQ=255)
                                                                                                              gTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCa                                         >  2:1535010/1‑150 (MQ=255)
                                                                                                               tCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCaa                                        >  2:2541077/1‑150 (MQ=255)
                                                                                                                 aCTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGa                                      >  2:3498115/1‑150 (MQ=255)
                                                                                                                 aCTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGa                                      >  1:2803232/1‑150 (MQ=255)
                                                                                                                 aCTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGa                                      >  1:5166651/1‑150 (MQ=255)
                                                                                                                   ttGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATc                                    >  2:7460845/1‑150 (MQ=255)
                                                                                                                   ttGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATc                                    >  2:8454974/1‑150 (MQ=255)
                                                                                                                   ttGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATc                                    <  2:5988903/150‑1 (MQ=255)
                                                                                                                          ttAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAATCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTc                             >  2:2490880/1‑150 (MQ=255)
                                                                                                                          ttAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTc                             >  1:3761477/1‑150 (MQ=255)
                                                                                                                            aGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGc                           <  1:6056666/150‑1 (MQ=255)
                                                                                                                             ggCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCt                          <  1:1698154/150‑1 (MQ=255)
                                                                                                                              gCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCtt                         >  1:100001/1‑150 (MQ=255)
                                                                                                                              gCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCtt                         <  2:5879957/150‑1 (MQ=255)
                                                                                                                                aaTCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATGTTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCg                       >  2:6312786/1‑150 (MQ=255)
                                                                                                                                 aTCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCga                      >  2:1155308/1‑150 (MQ=255)
                                                                                                                                  tCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCgaa                     <  2:2347661/150‑1 (MQ=255)
                                                                                                                                  tCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCgaa                     >  1:3063617/1‑150 (MQ=255)
                                                                                                                                   cccccGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCgaag                    <  1:629912/150‑1 (MQ=255)
                                                                                                                                    ccccGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCgaaga                   <  2:5740227/150‑1 (MQ=255)
                                                                                                                                    ccccGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCgaaga                   >  2:5605705/1‑150 (MQ=255)
                                                                                                                                    ccccGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCgaaga                   >  1:2654303/1‑150 (MQ=255)
                                                                                                                                     cccGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCgaagaa                  >  2:2726527/1‑150 (MQ=255)
                                                                                                                                     cccGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCgaagaa                  >  2:6694492/1‑150 (MQ=255)
                                                                                                                                     cccGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCgaagaa                  >  1:3644919/1‑150 (MQ=255)
                                                                                                                                       cGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGATGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGc                >  2:479469/1‑150 (MQ=255)
                                                                                                                                           aCCCGCGAATTATACGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGc            >  2:7368311/1‑150 (MQ=255)
                                                                                                                                             ccGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGCCTg         >  1:3508688/1‑150 (MQ=255)
                                                                                                                                               gcgTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGCCTGa        >  1:8441146/1‑150 (MQ=255)
                                                                                                                                                   ataATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCTCTCGCTTCGAAGAAGCCGGCCTGAAAAt    >  2:3041250/1‑150 (MQ=255)
                                                                                                                                                   ataATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGCCTGAAAAt    <  1:1466170/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTGCACCGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGATCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCAGGTTAGGCAATCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGCCTGAAAATCG  >  NC_002947/983438‑983736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: