| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,042,741 | T→A | 5.3% | intergenic (+34/+82) | PP_0896 → / ← PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,042,741 | 0 | T | A | 5.3% | 2061.4 / 9.5 | 729 | intergenic (+34/+82) | PP_0896/PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase |
| Reads supporting (aligned to +/- strand): ref base T (343/297); new base A (29/16); total (396/333) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 736 total aligned reads displayed.
ACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTA > NC_002947/1042592‑1042890 | atgccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAATCCCGCTc < 2:1640872‑M1/20‑1 (MQ=255) tGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCC < 1:6140314‑M1/150‑1 (MQ=255) gccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTccc > 2:134312‑M1/129‑150 (MQ=255) cAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGATCCCA > 2:724728‑M1/1‑150 (MQ=255) aGCCAGTGGCTGGTGTGAGAGGAAGATGTGCAGGAAGTGCGCCCGGTGAGGCGGGAACGGCAGGAGTTTACCTGGCGGGACTGGCCGGAGCCGTTCCAGAGAGTCCAGTGATGACAGTGGCGGCCTCTACGCGGGCAAACCCGCTcccca > 2:1887212/1‑148 (MQ=255) gCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCaaa < 2:2213222/150‑1 (MQ=255) ccAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCaact > 2:5843277/1‑148 (MQ=255) tGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGt < 2:852135/150‑1 (MQ=255) ggCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTTCCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTa < 2:2070111/150‑1 (MQ=255) ggCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTa < 1:5819750/150‑1 (MQ=255) tGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAAAGCGTAGcc > 1:4215866/1‑150 (MQ=255) gtgtgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCACCCAAATGCGTAGCCATCt > 1:6721238/1‑150 (MQ=255) tgtgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCATCTg > 2:4147200/1‑150 (MQ=255) gtgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTgg < 2:8569540/150‑1 (MQ=255) gaaGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCAGCTCCCAAATGCGTAGCCATCTGGCTTgc > 2:3756615/3‑150 (MQ=255) gTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGAAGCCTTCTGGCTTgc > 2:8302542/1‑150 (MQ=255) gTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCACCCAAATGCGTAGCCTTCTGGCTTgc > 2:3901278/1‑150 (MQ=255) aTTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTgcattt < 2:6650875/150‑5 (MQ=255) aTTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAACCCCCACCCAAAAGCGTAGCCATCAGGCTTTCGCTg > 1:2378481/1‑150 (MQ=255) tttGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGt > 1:5031860/1‑150 (MQ=255) gaggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCCCTCCCAAATGCGTAGCCGTCTGGCTTGCGCTGTACgt > 2:1505060/1‑150 (MQ=255) gAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCCCACCCCAAAGCCTAACCATATGGCTTGCGCTGTGCGTGtg < 1:8371753‑M2/150‑3 (MQ=255) aaGTGCGGCGGGTGAGGCGGGAAGGTCAGGTGTTTAGCTGGCGGGACTGGCCGGATCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgg > 1:5415156‑M2/1‑147 (MQ=255) aaGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgg > 2:6769483‑M2/1‑147 (MQ=255) gTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATTCGTATCCTTATTGCTTTGGCTGTAAGTGttgga < 1:1640872‑M2/150‑6 (MQ=255) gTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtggga > 2:7808001‑M2/1‑145 (MQ=255) gcggcgGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCCCACCCAGATGCGTAGCCATCTGGCTTGCGCTGTACGTGtgggagc < 1:3823619‑M2/150‑8 (MQ=255) ggcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgg < 2:1096540‑M1/150‑42 (MQ=255) catcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgtggcggcctCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCgg > 1:2580191‑M1/87‑150 (MQ=255) catcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgtggcggcctCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCgg > 1:6492463‑M1/87‑150 (MQ=255) catcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCgg > 2:8035536‑M1/87‑150 (MQ=255) catcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCgg > 1:7747687‑M1/87‑150 (MQ=255) gcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcggg > 2:6668733‑M2/1‑140 (MQ=255) gcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcggg > 2:2776943‑M2/1‑140 (MQ=255) atcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCggg > 2:2637925‑M1/86‑150 (MQ=255) cggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggc < 2:4089768‑M1/150‑44 (MQ=255) ggTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggctt < 1:1960979‑M1/150‑46 (MQ=255) tGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgc > 2:5110540‑M2/1‑135 (MQ=255) tGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGGACGTGtgggagcgggcgtgc < 2:3079417‑M2/150‑16 (MQ=255) tGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgc < 2:8809202‑M1/150‑48 (MQ=255) aGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCACCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgccc < 1:5638299‑M2/150‑18 (MQ=255) gCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCCAATGCGTAGCCTTCTGGCTTGCGCGGTACGGGtgggagcgggcttgcccgc < 2:7891892‑M2/150‑20 (MQ=255) ggATGGGCAGGTGTTTACGTGGCGGGACTGGCCGGAGCAGTTCGAGAGTGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTGGCGGTGTCCGTGtgggtgcgggcttgcccgcgaa > 1:4904587‑M2/1‑128 (MQ=255) ggAAGGGCAGGTGTTTACCTGGGGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaa > 1:2862969‑M2/1‑128 (MQ=255) ggAAGGGCAGGTGTTTACCTGGCGGGACTGGCGGGAGCAGTTCGAGAGCGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCATGCCCGCTCCCAAATGCTTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggattgcccgcgaa > 2:2504733‑M2/1‑128 (MQ=255) ggAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcaagcccgctcc > 1:3531507‑M2/1‑128 (MQ=255) aaGGGCTGGTGTGTACCTGGCGGGACTGGCCGGAGCCGTTCGAGAGAGTCGTGTGAGGACGGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGCGCGGGCTTGCCCGCGAagc < 2:3556797/150‑1 (MQ=255) aaGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcaagcccgctccca > 1:2734383‑M2/1‑126 (MQ=255) gggCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAACCCCGCACCCAAAATCGTAGCCGTCTGGCTTGCGGCGTACGGGGGGGAGCGGGCGAGCCCGCCAagcag > 1:8271377/1‑150 (MQ=255) ggCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAagcagc > 2:6420261/1‑150 (MQ=255) gCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAgcc < 2:4305129/150‑1 (MQ=255) gtgtTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCCCTCCCAAAAGCGTAGCCTTCTGGGTTGCGCTGTAAGTGTGGGTGGGGGCTTGCCCGCGAAGCAGcccccg > 1:219485/1‑150 (MQ=255) gtTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAACCCGCACCCAAAATCGAAGCCATCAGGCTTGCGCTGTACCTGTGGGAGCGGGCTTTCCCGCCAATCAACCGCCGCa > 1:6366979/1‑150 (MQ=255) cTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCCCACCCAAAAGCGTAGAAATATGGCGTGCCCTGAACGTTTGGGAGCGGGCAAGCCCGCGAACAAGCACCCGCAGTTCCa > 1:692174/1‑150 (MQ=255) ggCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCCCTCCCAAATTCGTAGCCTTCTGGCGTGCGCTGTACGTGTGGGAGCGGGCATGCCCGCGAAGCACCCGCCGCCCTTACATc > 2:4766256/1‑150 (MQ=255) gCGGGACTGGCCGGTGCTGTTCTAGATAGTCCTGTGATGACTGTGGGGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGGGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCa < 2:7665713/150‑1 (MQ=255) gCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGGCAGCCCCCGCCCCAAAGCGTAGCCTTATGGCGTGCGCTGTTAGTGTGGGAGCGGGCGTGCCCCCGAAGCAGCCGCCGCCGGTACagaa > 1:1058484/1‑147 (MQ=255) tGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCGCCCAAATTCGTTGCCTTCTGGCGTGCGCTGTACGTGTGGGCGCGGGCTTGCCCGCGAAGCCGCCGCCGCAGTTACATAAGGTTact > 1:3455547/1‑150 (MQ=255) gcgggcgCAGTTCGAGAGCGTCCTGTGATGAGTGGGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTCCGTGGGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttc < 1:5687974/144‑1 (MQ=255) gCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCtt < 2:5376442/86‑1 (MQ=255) ccGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttca > 2:7163670/1‑150 (MQ=255) cGGAGCAGTTCGAGCGAGCCCTGTGATGACTGTGGCGGCCTCTTGGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcac < 2:1774540/150‑1 (MQ=255) ggAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgc < 1:8032283‑M2/114‑20 (MQ=255) ggAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgc < 1:1788445‑M2/110‑16 (MQ=255) ggAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcact > 2:7453710/1‑150 (MQ=255) ggAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAAAGCGTAGCCGTCTGGCGTGCGCTGTACGTGTGGGAGCGGGCGTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcact > 2:2383432/1‑150 (MQ=255) cAGTTCGAGAGAGTCCTGTGAGGACGGGGGCGGCCTCTTCGCGGGCAAGCCCGCGCCCAAATGCGTCGCCTTCTGGCTTGCGCTGTACGTGGGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGa < 2:7373984/150‑1 (MQ=255) cGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCCAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACGTCGACGGcc > 2:6990741/1‑150 (MQ=255) gagagaGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCa > 2:6015925/1‑150 (MQ=255) gagagaGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCGTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCCCAGTTACAACAGGTTACTTCACTTCGACGGCCa > 1:8748393/1‑150 (MQ=255) gagagaGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCCCGCCCAAATTCGTAGCCTTATGGCTTGCGCTGTAAGTGTTGGAGCGGGCTTGCCCGCGAAGCAGCCCCCGCAGTTAAATCAGGTTACATAACATCGACGGCCa > 1:4317889/1‑150 (MQ=255) agTCCTGTGATGACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcggg > 1:1373388‑M1/1‑48 (MQ=255) tCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCGTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTc > 1:8642444/1‑150 (MQ=255) ccTGTGCTGACTGTGGCGGCCTCTCCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTCCGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCg < 1:7225315/150‑1 (MQ=255) gtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGa > 1:7408355‑M1/17‑76 (MQ=255) tgtgGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAAGGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGct < 2:6250689/150‑1 (MQ=255) ggggcggcCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTCGCCTTCTGGTTTGCGCTGTCGGTGTGGGCGCGGGCGTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGctc < 1:3243327/148‑1 (MQ=255) ggcCTCTTCGCGGGCAATCCCGCTCCCAAATTCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCca > 2:1123278/1‑150 (MQ=255) gggggttcggggCCACGCCCGCCCCCAcacttaccgcgcacgccagatggctacgatttggggtgggggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcc < 1:5934319‑M1/145‑124 (MQ=255) tctTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagg > 2:921845/1‑150 (MQ=255) ttCGCGGGCAAGCCCGCTCCCAAAAGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcctcacaggactctctcgaacggctccggccagtcccgccaggtaaacacctgcccgtcc < 2:3297153‑M2/150‑97 (MQ=255) TCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCCGGCTTTCGGCAATCTTGCTCTGCCAcagggca < 2:2926326‑M1/150‑1 (MQ=255) GCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggcagg < 2:8448408‑M1/150‑1 (MQ=255) gggccacgCCCGCTCCCAATGGGGTCGCCTGCGGGGTTGCGCTGCCGGTGGGGGCGGGGGCTGGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggcaggg < 1:4014123/143‑1 (MQ=255) CAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAg < 2:1031223‑M1/150‑1 (MQ=255) AAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTCCTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCagg < 2:4958852‑M1/150‑2 (MQ=255) AAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGt < 2:822800‑M1/150‑1 (MQ=255) AAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGt < 1:5183551‑M1/150‑1 (MQ=255) GCCCGCTCCCAATTGCGTCGCCTTCTGGCTTGCGCTGTCCGGGTGGGCGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGa > 1:7898872‑M1/1‑150 (MQ=255) cccGCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgc > 1:4797694‑M1/1‑10 (MQ=255) cccGCCCCCACCTGCGTCGCGTTGGGGGTTGCGGTGTCGGTGGGGGCGGGGGCGGCCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGAt < 1:4456045/150‑1 (MQ=255) ccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagcagccgccgcagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgcc < 2:6530699‑M2/150‑110 (MQ=255) ccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgcc < 2:4454849‑M2/150‑110 (MQ=255) ccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgcc < 1:2933951‑M2/150‑110 (MQ=255) CCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGAtg < 1:853845‑M1/150‑1 (MQ=255) CCGCTCCAAATTGGGTTGCCTTGTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGAtg > 1:7687056‑M1/1‑150 (MQ=255) cGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgccg < 1:3697753‑M2/150‑111 (MQ=255) gCTCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgccgc > 2:5733811‑M1/1‑7 (MQ=255) tCCCAcacgtacagcgcaagccagaaggctacgcatttgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgccgcac > 2:5526231‑M1/1‑5 (MQ=255) TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTa < 1:1200592‑M1/150‑1 (MQ=255) | ACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTA > NC_002947/1042592‑1042890 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |