| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,042,748 | T→A | 6.2% | intergenic (+41/+75) | PP_0896 → / ← PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,042,748 | 0 | T | A | 6.2% | 1662.0 / 19.0 | 597 | intergenic (+41/+75) | PP_0896/PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase |
| Reads supporting (aligned to +/- strand): ref base T (279/253); new base A (41/9); total (323/274) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.26e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 610 total aligned reads displayed.
CCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTC > NC_002947/1042599‑1042897 | ccAGTGGATGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCCCACCCAAAt > 2:4014123/1‑150 (MQ=255) ggCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTTCCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTa < 2:2070111/150‑1 (MQ=255) gCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAATCCCGCTCCCAAATGCGTAg > 2:7566020/1‑150 (MQ=255) gtgtgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCt < 2:904383/150‑1 (MQ=255) tgtgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTg < 2:1097360/150‑1 (MQ=255) gtgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTgg < 2:8569540/150‑1 (MQ=255) gtgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTgg < 2:7171124/150‑1 (MQ=255) gtgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTgg > 1:8681640/1‑150 (MQ=255) gtgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTgg < 1:5890452/150‑1 (MQ=255) tgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGc < 1:754926/150‑1 (MQ=255) tgAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCACCCAAATGCGTAGCCTTCTGGc > 1:7012096/1‑150 (MQ=255) aGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCtt < 1:6183963/150‑1 (MQ=255) gTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTgc > 2:1528630/1‑150 (MQ=255) gTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTgc > 2:5772455/1‑150 (MQ=255) gTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCACCCCAAAGCGTAGCCATCTGGCTTgc > 1:4961123/1‑150 (MQ=255) tAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTgcg < 1:3798535/150‑1 (MQ=255) aacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgtggcggcctCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTgcgc < 1:2166411‑M1/47‑1 (MQ=255) tttGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGTCTTCTGGCTTGCGCTGt > 2:36502/1‑150 (MQ=255) tttGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGt < 2:2544917/150‑1 (MQ=255) tttGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCACCCAAATTCGTAGCCTTCTGGCTTGCGCTGt > 2:851711/1‑150 (MQ=255) gaggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACgt < 2:6726175/150‑1 (MQ=255) gaggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACgt < 1:3463940/150‑1 (MQ=255) gaggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAAAGCGTAGCCTTCAGGCGTGCGCGGGACgt > 1:2579661/1‑150 (MQ=255) aaGTGCGGCGGGTGAGGCGGGAAGGTCAGGTGTTTAGCTGGCGGGACTGGCCGGATCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgg > 1:5415156‑M2/1‑147 (MQ=255) tacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgtggcggcctCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGa > 1:8794395‑M1/91‑150 (MQ=255) gTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATTCGTATCCTTATTGCTTTGGCTGTAAGTGttgga < 1:1640872‑M2/150‑6 (MQ=255) gTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtggga > 2:7808001‑M2/1‑145 (MQ=255) tGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCACCCAAAAGCGTAGCCTTCTGGGTTGCGCGGTAAGTGtggggg < 1:4475931‑M2/150‑7 (MQ=255) cggcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcg > 2:1836726‑M2/1‑142 (MQ=255) cggcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcg > 2:6261645‑M2/1‑142 (MQ=255) acatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgtggcggcctCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCg > 1:7719308‑M1/88‑150 (MQ=255) ggcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgg > 2:3252352‑M2/1‑141 (MQ=255) ggcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgg > 2:8278022‑M2/1‑141 (MQ=255) ggcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgg > 1:66971‑M2/1‑141 (MQ=255) catcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCgg > 2:2960548‑M1/87‑150 (MQ=255) gcggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcggg > 2:2776943‑M2/1‑140 (MQ=255) atcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCggg > 2:2637925‑M1/86‑150 (MQ=255) atcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCggg > 1:3906296‑M1/86‑150 (MQ=255) gTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCCCTCCCCAATGCGTAGCCTTATGGCTTGCGCTGTACGTGtgggagcgggcttg < 1:8457940‑M2/150‑15 (MQ=255) tGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgc > 2:5110540‑M2/1‑135 (MQ=255) tGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgc > 2:1035322‑M2/1‑135 (MQ=255) gAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCCAGCCCCCTCCCAAAATCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcc < 1:2701807‑M2/150‑17 (MQ=255) aGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCCCTCCCAAAAGCGTAGCCTTAAGGCTTGCGCTGTAAGTGtgggagagggcatgccc < 1:5638359‑M2/150‑18 (MQ=255) ggATGGGCAGGTGTTTACGTGGCGGGACTGGCCGGAGCAGTTCGAGAGTGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTGGCGGTGTCCGTGtgggtgcgggcttgcccgcgaa > 1:4904587‑M2/1‑128 (MQ=255) ggAAGGGCAGGTGTTTACCTGGGGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaa > 1:2862969‑M2/1‑128 (MQ=255) cgggCAGGTGTTTCCCGGGCGGGACGGGCCGGAGCCGTTCGCGAGCGTCCTGTGATGCCTGGGGCGGCCTCTTCGCGGGCACGCCCGCGCCCAACTGCGTAGCCTTCGGGCTTGCGCTGTCCGTGTGGGAGCGGGCTTGCCCGCGAagca < 2:7131662/149‑1 (MQ=255) gggCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCCAGCCCGCGCCCCAATGCGTAGCCGTATGGCGTGCGCGGTACGTGTTGGAGCGGGCTTGGCCGCCAagcag > 1:8271975/1‑150 (MQ=255) cAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAgccg > 2:7377001/1‑150 (MQ=255) cAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAAAGCGTAGCCTTCTGGCGTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAgccg > 2:5437637/1‑150 (MQ=255) gtgtTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGccgccg > 1:6457523/1‑150 (MQ=255) gtTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAACCCGCACCCAAAATCGAAGCCATCAGGCTTGCGCTGTACCTGTGGGAGCGGGCTTTCCCGCCAATCAACCGCCGCa > 1:6366979/1‑150 (MQ=255) aCCTGCCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGGCACCCCCCGCCCAAAATCGGAGCCGTCAGGGGTGCGCGGTTAGTGTGGGGGCGGGCGTTCCCCCGGAGCAccccccccccgta > 1:5148829/1‑143 (MQ=255) gCGGGACTGGCCGGAGCAGTTCGCGAGAGTCCTGTGAGGACGGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAACGGCGTAGCCTTCGGGCTGGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCa < 2:6435646/150‑1 (MQ=255) gCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGGCAGCCCCCGCCCCAAAGCGTAGCCTTATGGCGTGCGCTGTTAGTGTGGGAGCGGGCGTGCCCCCGAAGCAGCCGCCGCCGGTACagaa > 1:1058484/1‑147 (MQ=255) gggACTGGCGGGAGCTGTTCGAGAGAGTCCTGTGTGGACTGGGGCGGCCTCTCCGGGGGAACGCCCGCCCCCAAAGGCTTAGCCTTCTGGCTTGCGCTGTAGGGGTGGGTGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAgg < 1:725913/150‑1 (MQ=255) ggACTGGCCGGAGCAGTTCGAGCGAGGCCTGTGATGCCGGGGGCGGCCTCTTCGGGGGCACGCCCGCCCCCAAATGCGTAGCCTTCGGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGt < 1:4360270/150‑1 (MQ=255) ggACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAATTGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGt < 2:3447129/150‑1 (MQ=255) ggACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGt > 2:6032416/1‑150 (MQ=255) gCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGGGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttc < 2:6969407/150‑1 (MQ=255) cGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCGTCTGGCTTGCGCTGTACGTGGGGGAGCGGGCGTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcac > 2:4409656/1‑150 (MQ=255) ggAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgc < 1:1788445‑M2/110‑16 (MQ=255) ggAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcact > 2:7453710/1‑150 (MQ=255) ggAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAAAGCGTAGCCGTCTGGCGTGCGCTGTACGTGTGGGAGCGGGCGTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcact > 2:2383432/1‑150 (MQ=255) cAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCACCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGa < 2:733415/150‑1 (MQ=255) aGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGAc > 2:8153996/1‑150 (MQ=255) ttCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtggga < 2:4248937‑M2/93‑6 (MQ=255) ttCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCGTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACgg > 1:8042430/1‑150 (MQ=255) gagagaGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCGTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACAGCAGGGTACTTCACTTCGACGGCCa > 2:5887817/1‑150 (MQ=255) agagagTCCGGTTCTGCCTGGGGCGGCCTCTTCGCGGGCAAGCCCGCGCCCAACTGCGTCGCCTTCTGGCTTGCGCTGTACGTGTGGGAGGGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAg < 2:4099555/150‑1 (MQ=255) gTCGTGTGTTGAGTGGGGCGGCCTCTTCGCGGGCAAGCCCGCTCCAAAATGCGTCGCCTTCTGGCTTGCGCTGTAGGTGTGGGTGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCttt < 1:6868238/150‑1 (MQ=255) ccTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCg < 2:7960315/150‑1 (MQ=255) tgatgaCTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGc > 2:6538109/1‑148 (MQ=255) gtaactgcggcggctgCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGa > 1:2964118‑M1/17‑76 (MQ=255) tgtgGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGct < 1:4213355/150‑1 (MQ=255) ggggcggcCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTCGCCTTCTGGTTTGCGCTGTCGGTGTGGGCGCGGGCGTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGctc < 1:3243327/148‑1 (MQ=255) gcggcCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGc < 2:8686949/150‑1 (MQ=255) ctctTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcag > 2:4563519/1‑150 (MQ=255) tctTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTTCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCATTAGGCAATCTTGCTCTGCCAcagg > 2:1166780/1‑150 (MQ=255) ttCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcaacacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttac < 1:5803524‑M2/150‑97 (MQ=255) gaGCGGGCTTGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggca < 2:1666827‑M1/148‑1 (MQ=255) CGGGCACGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCAcagggcaggg > 1:7876740‑M1/1‑150 (MQ=255) GCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCa < 1:2377552‑M1/150‑1 (MQ=255) aaGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacc < 1:1960979‑M2/150‑106 (MQ=255) AAGCCCGCTCCCAAATGCGTTGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGt > 2:8345949‑M1/1‑150 (MQ=255) AAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTCCTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCagg < 2:4958852‑M1/150‑2 (MQ=255) cccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagcagccgccgcagtcatcacaggact > 1:1373388‑M2/1‑42 (MQ=255) cccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagcagccgccgcagtcatcacaggact < 2:1373388‑M2/90‑49 (MQ=255) cccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgc < 2:5578868‑M2/150‑109 (MQ=255) ccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagcagccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgcc < 2:6652478‑M2/150‑110 (MQ=255) ccGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgcc < 1:8581167‑M2/150‑110 (MQ=255) CGCTCCCAATTGCGTAGCCTTCTGGCTTGCGCTGTCGGTGTGGGTGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGAtgt > 2:2201660‑M1/1‑150 (MQ=255) CGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGAtgt < 1:5231750‑M1/150‑1 (MQ=255) TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTa < 1:1200592‑M1/150‑1 (MQ=255) cccAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGtgggagcgggcttgcccgcgaagaggccgccacagtcatcacaggactctctcgaactgctccggccagtcccgccaggtaaacacctgcccttcccgcctcacccgccgcact < 2:3849387‑M2/150‑115 (MQ=255) CCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTAcc < 1:3541999‑M1/150‑1 (MQ=255) CAAAGGCGTAGCCTTCGGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCg > 2:4770963‑M1/1‑150 (MQ=255) AAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGct > 2:8457566‑M1/1‑117 (MQ=255) AAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGa < 2:5329314‑M1/150‑1 (MQ=255) AAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGa < 1:3690131‑M1/150‑1 (MQ=255) tGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTc < 1:4294840/150‑1 (MQ=255) | CCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGCTCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTC > NC_002947/1042599‑1042897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |