| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,167,740 | C→T | 100% | Q185* (CAG→TAG) | oprB‑I → | carbohydrate‑selective porin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,167,740 | 0 | C | T | 99.9% | 2095.7 / ‑5.8 | 582 | Q185* (CAG→TAG) | oprB‑I | carbohydrate‑selective porin |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (303/277); total (305/277) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 582 total aligned reads displayed.
CGTGGCCAGACCTGGCGCCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAACCGGCAACGGC > NC_002947/1167593‑1167886 | tGGCCAGACCTGGCGCCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGt < 2:7487319/150‑1 (MQ=255) gCCAGACCTGGCGCCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTgg < 1:780353/150‑1 (MQ=255) gCCAGACCTGGCGCCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTgg > 1:1964262/1‑150 (MQ=255) gCCAGACCTGGCGCCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTgg < 2:3918991/150‑1 (MQ=255) gCCAGACCTGGCGCCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTgg < 2:6316609/150‑1 (MQ=255) ccAGACCTGGCGCCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTggg > 1:1002200/1‑150 (MQ=255) cAGACCTGGCGCCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGc > 2:5983477/1‑150 (MQ=255) aGACCTGGCGCCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCa > 1:4744640/1‑150 (MQ=255) tGGCGCCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACtgg < 1:2094124/150‑1 (MQ=255) gcCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACtgggtgg > 1:6460171/1‑150 (MQ=255) gcCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACtgggtgg > 1:6383569/1‑150 (MQ=255) tGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGggcg > 2:2792639/1‑150 (MQ=255) cccAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCa > 1:2574116/1‑150 (MQ=255) ccAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCAt > 1:8565775/1‑150 (MQ=255) ccAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCAt > 1:5310026/1‑150 (MQ=255) ccAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCAt > 1:1721461/1‑150 (MQ=255) aGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCt > 1:5358606/1‑150 (MQ=255) gATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCCTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTg < 2:330295/150‑1 (MQ=255) aTGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTgg > 2:1568976/1‑150 (MQ=255) gtgGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTa > 2:8149537/1‑150 (MQ=255) gATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATc < 2:1815559/142‑1 (MQ=255) gATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATc > 1:1815559/1‑142 (MQ=255) gATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACaa < 1:1407994/150‑1 (MQ=255) gATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACaa < 2:2002087/150‑1 (MQ=255) aTCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAAc > 2:374606/1‑150 (MQ=255) aTCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAAc < 1:2818265/150‑1 (MQ=255) tCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACt > 2:5219814/1‑150 (MQ=255) aaGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTgg < 2:7313954/150‑1 (MQ=255) aGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCgg > 1:8628865/1‑150 (MQ=255) ttCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAg > 1:4364236/1‑150 (MQ=255) cGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTg < 2:5658120/150‑1 (MQ=255) gACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTgg < 2:1278564/150‑1 (MQ=255) gACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTgg > 1:7391659/1‑150 (MQ=255) gACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTACCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTgg > 2:6581002/1‑150 (MQ=255) aCGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTggg < 1:884364/150‑1 (MQ=255) gcgcTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTg > 1:5500101/1‑150 (MQ=255) gcTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCg < 1:349599/150‑1 (MQ=255) cTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCgg < 1:7665372/150‑1 (MQ=255) cTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCCGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCgg < 1:2690992/150‑1 (MQ=255) cGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGaa < 2:479994/150‑1 (MQ=255) cGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGaa < 1:7970412/150‑1 (MQ=255) cGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGaa < 2:5423726/150‑1 (MQ=255) tGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGt > 2:1492432/1‑150 (MQ=255) tGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGt > 1:4498458/1‑150 (MQ=255) gAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTa > 2:516110/1‑150 (MQ=255) aTTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTacaa < 2:7023204/150‑1 (MQ=255) tttGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTacaac < 2:8799564/150‑1 (MQ=255) ttGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTacaaca < 2:6086754/150‑1 (MQ=255) gTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGc > 2:40452/1‑150 (MQ=255) ttttGGCGAGGGCGAGGACTTCAACCGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGcc < 1:4876215/150‑1 (MQ=255) ggcgagggcgagGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAg > 2:777505/1‑150 (MQ=255) cgagggcgaggACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGTCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGtt > 1:4947121/1‑150 (MQ=255) ggcgaggACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGttcttc < 1:1622772/150‑1 (MQ=255) ggcgaggACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGttcttc < 1:6902140/150‑1 (MQ=255) gaggACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTa > 2:2511681/1‑150 (MQ=255) gaggACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTa > 1:321689/1‑150 (MQ=255) gaggACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTa > 2:1345998/1‑150 (MQ=255) gaggACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTa < 2:1172682/150‑1 (MQ=255) aggACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTAc > 1:7193/1‑150 (MQ=255) ggACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACa < 2:5746168/150‑1 (MQ=255) gACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAg < 2:8563711/150‑1 (MQ=255) ttCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTc > 1:994846/1‑150 (MQ=255) tacAAAAGATTCCCTTGCGACTTCCAGAACCTGGCCTTATGAGGATCGAAGGAGGGAAACTGGGTGTGCGGCATCAGTTACAACAGGCCGGTCAGACAGTGGGCGCTGCGGGAGAAGTACAACAAAACGCAGGATTTCTTCGTACAGGTc > 2:6936244/3‑150 (MQ=18) tCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGACGTACAACATCACGCCGGAGTTCTTCGTACAGGTCg > 2:4333711/1‑150 (MQ=255) tCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCg > 1:5999280/1‑150 (MQ=255) tCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCg > 1:2407009/1‑150 (MQ=255) tCAACAGCTTCCCTTGCGACTCCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCg > 2:4559617/1‑150 (MQ=255) cAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCgg < 1:6340373/150‑1 (MQ=255) cAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCgg > 1:8497256/1‑150 (MQ=255) aaCAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCggg > 1:297943/1‑150 (MQ=255) aaCAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCggg > 1:7440253/1‑150 (MQ=255) aaCAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCggg < 1:1282361/150‑1 (MQ=255) aaCAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCggg < 2:8337221/150‑1 (MQ=255) aaCAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCggg < 2:4744277/150‑1 (MQ=255) aaCAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCggg > 1:8257000/1‑150 (MQ=255) cccTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAAGTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGa < 1:8148523/150‑1 (MQ=255) cccTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGa < 1:1185399/150‑1 (MQ=255) ccTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAg > 2:7853588/1‑150 (MQ=255) ttGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCa > 1:507784/1‑150 (MQ=255) tGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAg > 2:2423064/1‑150 (MQ=255) ttCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCt > 2:34869/1‑150 (MQ=255) ttCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCt > 2:2599319/1‑150 (MQ=255) ttCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCt > 2:647246/1‑150 (MQ=255) tCCAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCtt < 1:5832651/150‑1 (MQ=255) ccAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTc > 2:366507/1‑150 (MQ=255) cAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTcc > 1:6709673/1‑150 (MQ=255) cAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTcc < 2:5311107/150‑1 (MQ=255) cAGAACCTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTcc > 1:4007238/1‑150 (MQ=255) cTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTg > 1:571232/1‑150 (MQ=255) cTGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTg < 2:5516961/150‑1 (MQ=255) tGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTgg > 2:218893/1‑150 (MQ=255) tGGCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTgg > 1:2276347/1‑150 (MQ=255) gCCTTCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGaa > 2:6757049/1‑150 (MQ=255) ttCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAAcc > 1:8392477/1‑150 (MQ=255) ttCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAAcc < 1:3765748/150‑1 (MQ=255) tCTGCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAACCg < 2:4940145/150‑1 (MQ=255) gCGGCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAACCGGCa > 1:3671242/1‑150 (MQ=255) gCTCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAACCGGCAACg > 2:2276037/1‑150 (MQ=255) tCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAACCGGCAACGGc < 2:3041680/150‑1 (MQ=255) tCGTAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAACCGGCAACGGc > 1:7031746/1‑150 (MQ=255) | CGTGGCCAGACCTGGCGCCTGACCCAGATGTGGATCAAGCAGAAGTACTTCGACGGCGCGCTGGACGTGAAATTTGGCCGTTTTGGCGAGGGCGAGGACTTCAACAGCTTCCCTTGCGACTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGTGGGCGGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGCTGCGGGTGAAGTACAACATCACGCCGGAGTTCTTCGTACAGGTCGGGGCCTTCGAGCAGAACCCTTCCAACCTGGAAACCGGCAACGGC > NC_002947/1167593‑1167886 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |