| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,360,995 | G→C | 8.5% | intergenic (+307/‑85) | PP_1180 → / → PP_1181 | hypothetical protein/two‑component system response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,360,995 | 0 | G | C | 8.5% | 1508.7 / 96.6 | 459 | intergenic (+307/‑85) | PP_1180/PP_1181 | hypothetical protein/two‑component system response regulator |
| Reads supporting (aligned to +/- strand): ref base G (233/187); new base C (11/28); total (244/215) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.27e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01 | |||||||||||
Only 100 of 485 total aligned reads displayed.
CCAAGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCG > NC_002947/1360846‑1361143 | ccAAGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCgg > 1:8438593/1‑150 (MQ=255) cAAGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCAGGGAGATCGAGCACCGCCCGCggg > 2:3156661/1‑150 (MQ=255) aaGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCgggg > 2:6801372/1‑150 (MQ=255) aaGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCgggg < 2:4100364/150‑1 (MQ=255) ggTTTGCCGTATTTGTCTGCACCGTGACGCCCTTGGGCAG‑TTTTTTGTGGGCGCGCAGCCTGTCACAAAACACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCt < 2:6538763/150‑1 (MQ=255) ggTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCt < 1:3581211/150‑1 (MQ=255) tttGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCg < 2:2536916/150‑1 (MQ=255) tttGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCg > 1:6765000/1‑150 (MQ=255) tGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGt > 1:8755347/1‑150 (MQ=255) gCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGACCGAGCGCCCCGCGGGCGGTGCTCGAtc < 2:6428019/150‑1 (MQ=255) cAGTATTTTTCTGAACCGTGAAGCCCTTGGGCAGTTTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGtc < 1:85701/150‑1 (MQ=255) gTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCg > 2:1586819/1‑150 (MQ=255) aTTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGCGAGACCGAGCGCCCCGCGGGCGGTGCTCGATCTCCCa < 1:7861267/150‑1 (MQ=37) tttttCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGGGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGCGAGACCGAGCGCCCCGCGGGCGGTGCTCGATCTCCCAg < 1:7333266/150‑1 (MQ=37) tttttCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGcgg > 1:6224841/1‑148 (MQ=255) tttttCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAg > 2:3802273/1‑150 (MQ=255) ttttCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAgg < 1:4150203/150‑1 (MQ=255) ttCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGc > 2:4199033/1‑150 (MQ=255) tGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGcccc < 1:2027788/150‑1 (MQ=255) cACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGcccccc > 2:2227305/1‑150 (MQ=255) cGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATc < 1:5083209/150‑1 (MQ=255) aGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACAt < 2:5251198/150‑1 (MQ=255) cccTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTc < 1:3331213/150‑1 (MQ=255) cccTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTc < 2:2850182/150‑1 (MQ=255) cccTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTc < 1:1760842/150‑1 (MQ=255) cccTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTc < 1:6957271/150‑1 (MQ=255) cccTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTc > 2:460662/1‑150 (MQ=255) cTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCAt > 1:1214568/1‑150 (MQ=255) ttGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATa < 1:1640543/150‑1 (MQ=255) gCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATActct > 1:6546622/1‑150 (MQ=255) tttttttttGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCGGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAg > 2:88170/2‑150 (MQ=255) ttttttttGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGc > 1:5199250/1‑150 (MQ=255) tttGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGccc > 1:2087238/1‑150 (MQ=255) ttGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCt > 2:2391998/1‑150 (MQ=255) gcgcGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGaca > 1:1824763/1‑150 (MQ=255) gcgAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACg < 1:256157/150‑1 (MQ=255) aaGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATc < 1:8244636/150‑1 (MQ=255) gCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATccc < 2:5708210/150‑1 (MQ=255) tGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAg > 1:6447514/1‑150 (MQ=255) tGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAg > 2:4293180/1‑150 (MQ=255) ggTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGATATCGAGCACCGCCCGCGGGGCGCTAGGTCACGCAGGGCCCCCCATCTACATTCATAATCTCAGCGGCCCTGACACGATCCC‑AAg < 2:8382956/149‑1 (MQ=255) acaAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGaaca > 1:1378082/1‑150 (MQ=255) caAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGaacaa > 2:8102574/1‑150 (MQ=255) aaaaaaCGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGaacaac > 1:4499365/1‑150 (MQ=255) aCGGTTCAGTCGTGGGGTCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCACGCGGTGCGCTCGGTCTCGCAGGGCCCCCCATCTTCTTTCATACTCTCAGCTGCGCTGACACGATCCC‑AAGAACATCAAGGc < 2:6739533/150‑1 (MQ=255) gTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCaa > 2:5520713/1‑150 (MQ=255) ttCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTCCATTCATACTCTCAGCTGCCCTGACACGCTCCC‑AAGAACAACTAGGCCaaa > 1:4052006/1‑150 (MQ=255) ttCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCaaa < 2:2983990/150‑1 (MQ=255) ttCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCaaa < 1:1124213/150‑1 (MQ=255) gTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCCAAGCCa > 2:4888634/1‑150 (MQ=255) tCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCAt > 1:2921432/1‑150 (MQ=255) tCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCAt > 1:2372469/1‑150 (MQ=255) tCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCAt > 1:4771317/1‑150 (MQ=255) aGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGa < 2:2008872/150‑1 (MQ=255) gggCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGacca > 2:7138897/1‑150 (MQ=255) ggTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCAcccc > 1:4733715/1‑150 (MQ=255) gCGTGTCTGAAGATCTGGGGTGTCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATAccc > 2:3400625/1‑150 (MQ=255) gtCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCa < 2:6139252/150‑1 (MQ=255) tCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCAt > 2:352790/1‑150 (MQ=255) cTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATc < 2:705547/150‑1 (MQ=255) tGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATcc > 1:4631215/1‑150 (MQ=255) gAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCt > 2:169173/1‑150 (MQ=255) gAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCt > 1:4917064/1‑150 (MQ=255) aaGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTc < 1:6327564/150‑1 (MQ=255) aaGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTc < 1:3940673/150‑1 (MQ=255) aTCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCAtc > 1:5846051/1‑150 (MQ=255) tCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCCGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCAtcg > 1:3086591/1‑150 (MQ=255) tGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCAtcgtc > 2:5883507/1‑150 (MQ=255) tGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCAtcgtc < 1:534328/150‑1 (MQ=255) gggTTCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGa > 1:2243502/1‑150 (MQ=255) gggTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCTAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCAtcgtca > 2:3297527/1‑149 (MQ=255) ggTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGaa < 2:7795546/150‑1 (MQ=255) gTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAg > 1:3893406/1‑150 (MQ=255) gCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAgac < 1:7154043/150‑1 (MQ=255) cTGCGAGACCGAGCGCCCCGCGGGCGGTGCTCGATCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAgacga > 2:868479/1‑150 (MQ=38) tgcgagaCCGAGCGCCCCGCGGGCGGTGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAgacgac > 1:7643925/4‑150 (MQ=38) tGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAgacgac > 2:7352450/1‑150 (MQ=255) tGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAgacgac > 2:6944814/1‑150 (MQ=255) tGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAgacgac > 1:6101629/1‑150 (MQ=255) tGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAgacgac > 1:3458764/1‑150 (MQ=255) tGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAgacgac > 2:3877087/1‑150 (MQ=255) ggAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCa < 1:5520713/150‑1 (MQ=255) gagaCCGAGCGCCCCGCGGGCGGTGCTCGATCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAg > 1:745741/1‑150 (MQ=38) gaTCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAgcg > 2:3609409/1‑150 (MQ=255) aTCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATCCTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAgcgc > 2:6991137/1‑150 (MQ=255) aTCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAgcgc > 2:7695646/1‑150 (MQ=255) tCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGcc < 2:2057336/150‑1 (MQ=255) tCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATATACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGcc < 1:1522950/150‑1 (MQ=255) aGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGa < 1:1001515/103‑1 (MQ=255) aGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGa > 2:1001515/1‑103 (MQ=255) gCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGc > 1:3823973/1‑150 (MQ=255) cACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGcc > 2:1139877/1‑150 (MQ=255) cACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGcc > 1:6001577/1‑150 (MQ=255) cgcccgcGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGaa > 1:4298882/1‑150 (MQ=255) cccgcGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACt < 2:4500085/150‑1 (MQ=255) ccgcGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAAc > 2:3997723/1‑148 (MQ=255) cgcgGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCa < 2:6243063/150‑1 (MQ=255) gcgGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCAc > 1:2722292/1‑150 (MQ=255) cgGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCAcc < 1:5149897/150‑1 (MQ=255) ggggCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCAccg < 2:7512080/150‑1 (MQ=255) | CCAAGTGGTTTGCAGTATTTTTCTGCACCGTGAAGCCCTTGGGCAG‑TTTTTTTTGGGCGCGAAGCCTGTCACAAAAAACGGTTCAGTCGAGGGGGCGGTAGGGCGTGTCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCC‑AAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCG > NC_002947/1360846‑1361143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |