BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,372,799	A→C	9.7%	E92D (GAA→GAC)	PP_1193 →	membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,372,799	0	A	C	9.7%	736.8 / 3.6	280	E92D (GAA→GAC)	PP_1193	membrane protein
Reads supporting (aligned to +/- strand): ref base A (127/105); new base C (3/33); total (132/148)
Fisher's exact test for biased strand distribution p-value = 5.38e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 325 total aligned reads displayed.

GTGGCCACGGTGGCGGTGGAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGGGGAAC  >  NC_002947/1372650‑1372946

ggggCCTCGGTGGCGGTGGATGCGGCGGTGGCGGTGGTCTCGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGgcggaa                                                                                                                                                     <  2:7257848/148‑1 (MQ=255)

 tGGCCACGGTGGCGGTGGAAGCGGCTGTGGATTTGTTAACGGTGGTGGTGGAAGCGGCGTTGTCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGgcggaag                                                                                                                                                    <  2:158061/150‑1 (MQ=18)

 tGGCCACGGTGGCGGTGGAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGGGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGgcggaag                                                                                                                                                    >  2:7999392/1‑150 (MQ=255)

   gCCACGGTGGCGGTGGAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGgcggaagcg                                                                                                                                                  <  1:6223680/150‑1 (MQ=255)

    ccACGGTGGCGGTGGTTGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGgcggaagcgg                                                                                                                                                 <  2:5858769/150‑1 (MQ=255)

    ccACGGTGGCGGTGGAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGgcggaagcgg                                                                                                                                                 >  2:8412308/1‑150 (MQ=255)

     cACGGTGGCGGTGGAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGGGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCAGGGTGgcggaagcgga                                                                                                                                                >  2:2585581/1‑150 (MQ=255)

      tgggttgcggttgAATCGGGGGTGGGGGTTGTCACGGTGGTTGTGGATTCGGCGTTGGCGGTGGGCTCGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGgcggaagcggaa                                                                                                                                               <  1:1130887/148‑1 (MQ=18)

      ccggtggcggttgACGGGGCGGTGGCGGTGGTCACGGGGGTGGTGGACGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGgcggaagcggaa                                                                                                                                               <  2:5559845/149‑1 (MQ=18)

      aCGGTGGCGGTGTAAGCGGCGGGGGGGGTGGTCTCGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGCGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGgcggaagcggaa                                                                                                                                               <  1:713495/150‑1 (MQ=18)

      aCGGTGGCGGTGGAAGCGGCGGTGGCGGTGGTCTCGGTGGGGGTGGATGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGgcggaagcggaa                                                                                                                                               <  2:3874651/150‑1 (MQ=255)

         gtggcggtggAAGCGGCGGGGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAgtg                                                                                                                                            <  1:2381326/150‑1 (MQ=255)

           ggcggtggAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAgtggt                                                                                                                                          <  2:2397076/150‑1 (MQ=255)

            gcggtggAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAgtggtg                                                                                                                                         <  2:3273913/150‑1 (MQ=255)

            gcgggggCAGCGGCGGTGGCGGGGGTCACGGTGGGGGTGGACGCGGCGGTGGCGGTGGGCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAgtggtg                                                                                                                                         <  2:7716193/150‑1 (MQ=18)

             cggtggAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGtggtgg                                                                                                                                        <  2:3209411/150‑1 (MQ=255)

             cggaggACGCGGCGGCGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGtggtgg                                                                                                                                        <  2:8348294/150‑1 (MQ=255)

              ggtggAAGCGGCGGTGGCGGTGGTCACGGTGGAGGTGGATGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGc                                                                                                                                       <  2:4913138/150‑1 (MQ=255)

               gtggAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGcggaagcggaag                                                                                                                                              <  2:3984962/142‑1 (MQ=255)

                ttgacgcggcgGTGGCGGTGGTCTCGGTGGTGGTGGATGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGATGCGGCGGTGGTGGTGGCCTCGTTGGTGGTGGATGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCa                                                                                                                                     <  1:4487154/145‑1 (MQ=25)

                tggAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCCCGGTGGTGGTGGACGCGGCGGGGGGGGGGGCCCCGGTGGTGGGGGAGGTGGGGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCa                                                                                                                                     >  2:3492106/1‑150 (MQ=18)

                tggAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCAGGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCa                                                                                                                                     >  2:7788256/1‑150 (MQ=255)

                 ggAAGCTGCGGTGGCGGGGGCCCCGGTTGCGGTGGACGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCAc                                                                                                                                    <  1:1749004/150‑1 (MQ=18)

                 ggAAGCGGCGGTGGCGGTGGTCCCGGTGGGGGTGGCTGCGGCGGTGGCGGTGGCCACGGGGGCGGTGGACGGGGCGGGGGGGGTGGCCACGGTGGTGGTGGAAGCGGGGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCAc                                                                                                                                    <  1:608639/150‑1 (MQ=18)

                  gAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACg                                                                                                                                   >  1:8481226/1‑150 (MQ=255)

                  gAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACg                                                                                                                                   >  2:2725749/1‑150 (MQ=255)

                  gAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGGGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGGGGCCATGGTGGCGGAGGCGGAAGTGGTGGCCACg                                                                                                                                   >  2:655385/1‑150 (MQ=255)

                   tcgcggcgGTGGCGGTGGTCCCGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGACGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACgg                                                                                                                                  <  2:6089867/148‑1 (MQ=255)

                    aGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGc                                                                                                                                 >  1:7668490/1‑150 (MQ=255)

                        gcggtggcggtgGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCCGGGTGGCGGAAGCGGAGGGGGTGGCCCCGGCAgcg                                                                                                                             >  2:615495/1‑150 (MQ=21)

                         cggtggcggtggTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAgcgg                                                                                                                            <  2:2156757/150‑1 (MQ=255)

                         cggtggcggtggTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAgcgg                                                                                                                            <  1:6738823/150‑1 (MQ=255)

                         cgggggcggtggTCACGGTGGGGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAgcgg                                                                                                                            <  1:404251/150‑1 (MQ=255)

                          ggtggcggtggTCACGGTGGTGGTGGACGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAgcggc                                                                                                                           <  1:4328441/150‑1 (MQ=255)

                          ggcggcggtggCCACGGTGGGGGGGGAAGCGGCGGTGGCGGTGGCCCCGGTGGTGGTGGACGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGGGGGGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAgcggc                                                                                                                           <  2:6756385/147‑1 (MQ=17)

                            tggcgggggGCCCGGGGGGGGTGGTTGGGGCGGTGGCGGGGGCCCCGGTGGTGGTGGCCGCGGCGGGGGTGGTGGGCACGGTGGTGGTGGACGTGGTGGCGGCGGTGGCCCTGGTGGCGGAAGCGGAAGTGGTGGCCCCGGCAGcggcgg                                                                                                                         <  2:2530050/150‑1 (MQ=255)

                             ggcggtggTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTAGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGt                                                                                                                        <  2:2286623/150‑1 (MQ=255)

                                ggtggtCCCGGTGGGGGTGGAAGCGGCGGTGGCGGTGGCCCCGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGCCGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGAc                                                                                                                     >  2:4300625/1‑150 (MQ=25)

                                 gtggtCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACg                                                                                                                    >  1:2777568/1‑150 (MQ=255)

                                  tggtCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACgg                                                                                                                   >  1:986456/1‑150 (MQ=255)

                                      ctcggcggAGGTGCCAGCGGCGGTGGCGGTGGCCCCGGTGGCGGTGGCTGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACggtggt                                                                                                               <  2:5122076/148‑1 (MQ=25)

                                        cggtggcggtggACGCGGCGGGGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGGGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGtggtgg                                                                                                             <  1:7006397/150‑1 (MQ=255)

                                        cGGTGGTGGGGGACGCGGCGGGGGCGGGGGCCACGGTGGTGGTGGCCGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGtggtgg                                                                                                             <  2:5743264/150‑1 (MQ=37)

                                         ggtggtggtGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGc                                                                                                            >  1:3579454/1‑150 (MQ=255)

                                         ggtggtggtGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGc                                                                                                            >  1:242662/1‑150 (MQ=255)

                                           tggtggtggAAGCGGCGGTGGCGGTGGCCTCGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTCGTGGCCa                                                                                                          <  1:5048697/150‑1 (MQ=255)

                                              tggtggAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGc                                                                                                       <  2:8479129/150‑1 (MQ=255)

                                                gtggAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCg                                                                                                     <  1:1617160/150‑1 (MQ=255)

                                                gtggAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGGGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCg                                                                                                     >  2:3737789/1‑150 (MQ=255)

                                                  ggAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGc                                                                                                   >  2:854471/1‑150 (MQ=255)

                                                   gAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCa                                                                                                  >  1:5240687/1‑150 (MQ=255)

                                                    aaGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCaa                                                                                                 <  1:7526806/150‑1 (MQ=255)

                                                      gcggcgGTGGCGGTGGCCACGGTGGTGGTGGATGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACa                                                                                               <  2:4533562/150‑1 (MQ=255)

                                                        ggcggtgtcggtGGCCACGGTGGTGGTGGACGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGc                                                                                             <  2:2798910/150‑1 (MQ=255)

                                                        ggcggtggcggtGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGc                                                                                             <  2:2197552/150‑1 (MQ=255)

                                                          cggcggcggtggCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGTAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCgg                                                                                           <  2:1402424/150‑1 (MQ=255)

                                                           ggtggcggtggcCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGc                                                                                          <  2:7407174/150‑1 (MQ=255)

                                                           ggtggcggtggcCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCAGGGTGGCGGACGCGGACGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCACCAGCGGc                                                                                          >  2:7065010/1‑150 (MQ=255)

                                                            gtggcggtggcCACGGGGGGGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCa                                                                                         <  1:3774623/150‑1 (MQ=255)

                                                               gcggtggcCACGGTGGGGGTGGACGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTg                                                                                      <  2:5376598/150‑1 (MQ=255)

                                                                 ggtggcCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGc                                                                                    <  1:3958572/150‑1 (MQ=255)

                                                                 gggggcCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGc                                                                                    <  2:1155053/147‑1 (MQ=255)

                                                                  gtggtCTCGGTGGTGGTGGATGTGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGcc                                                                                   <  2:2671227/150‑1 (MQ=255)

                                                                     gcCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCacg                                                                                >  1:4923249/1‑150 (MQ=255)

                                                                       cACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCacgac                                                                              >  2:6646696/1‑150 (MQ=255)

                                                                       cACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCacgac                                                                              >  2:407415/1‑150 (MQ=255)

                                                                                 gtggAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCaa                                                                    >  1:5740809/1‑150 (MQ=255)

                                                                                  tggAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCaaa                                                                   >  2:2259464/1‑150 (MQ=255)

                                                                                    gAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGTGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACg                                                                 >  1:4745924/1‑150 (MQ=255)

                                                                                      cgggggggtggtgggGGCCCGGGTGGTGGTGGATGTGGTGGCGGCGGTGGCCTTGGTGGCGGACGCGGAAGTGGTGGCCACGGCTGCGGCGGTGACGGTGGTGGCCATGCCGGCAACCGCGGCTGTGGCCACGACGGTAATTCAAACGCt                                                               <  1:7897634/144‑1 (MQ=255)

                                                                                        gggcggTGGTGGTGGCCTCGGTGGGGGTGGACGTGGTGGCGGCGGTGGCCTTGGTGGCGGACGCGGAAGGGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTgg                                                             <  2:8797324/149‑1 (MQ=255)

                                                                                                gtggtggCCCGGGTGGTGGGGGATGTGGTGGGGGGGGTGGCCATGGTGGGGGACGGGGATGTGGTGGCCCCGGCCGGGGCGGTGTGGGTGGTGGCCTTGCCGGAAACAGCGGCTGTGGCCACGACGGTAATTCAAACGCTGGGCgcagca                                                     <  1:540925/150‑1 (MQ=255)

                                                                                                 tggtggCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCgcagcag                                                    >  1:2670942/1‑150 (MQ=255)

                                                                                                      gCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAAcc                                               >  2:8215290/1‑150 (MQ=255)

                                                                                                        cACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCAt                                             >  1:654978/1‑150 (MQ=255)

                                                                                                        cACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCAt                                             >  1:2727751/1‑150 (MQ=255)

                                                                                                          gggtggtggtGTATGTGGGGGGGGGGGTGGCCTTGGTGGGGGACGGGGATGTGGTGGCCCCGGCCGCGGGGGGGAGGGTGGTGGCAATGCCGCCAACCGGGGCAGGGCCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGc                                           <  1:6026613/149‑1 (MQ=255)

                                                                                                            gtgggggtgTAAGTGGTGGCGGCGGTGGCAATGGGGGCGGAAGCGGACGTGGTGGCCACGGCAGCGGCGGTGAGGGTGGTGGCCAGGCCGCCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTg                                         <  1:7838776/150‑1 (MQ=255)

                                                                                                                  gtggttgtggtgGCGGCGGTGGCCTTGGTGGCGGCAGGGGAAGTGGTGGCCACGGCTGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCgg                                   <  2:4180209/144‑1 (MQ=255)

                                                                                                                   tggACGGGGTGGCGGCGGGGGCCCGGGGGGCGGAAGCGTAAGGGGGGGCCCCGGCAGCGGCGGTGACGGTGGGGGCCAGGCCGGCAACAGCGGCTGTGGCCACGACGGTAATTCAAACGCTGGGCGCGGCAGCAACCATGCTGAAGCggg                                  <  2:197349/150‑1 (MQ=255)

                                                                                                                    ggAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGt                                 >  1:5573936/1‑150 (MQ=255)

                                                                                                                          ggtggCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGAt                           >  2:8106594/1‑150 (MQ=255)

                                                                                                                           gtggCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGAAAATCAAACGCTGGGCGCAGCAGCAACCATGCAGAAGCGGGTGACGATc                          >  1:3857308/1‑150 (MQ=255)

                                                                                                                              gggggggTGGCATTGGTGGCGTATGGGTACGTGGTGGCCACGGCTGGGGGGGTGAGGGTGGTGCCCCTGCCGCAAACTGCGGATGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATg                       <  1:7433531/145‑1 (MQ=255)

                                                                                                                              gcggcgGTGGCCATGGTGGCGGAAGCGGACGTGGTGGCCACGGCAGCGGCGGTGACGGGGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATg                       <  1:2007744/150‑1 (MQ=255)

                                                                                                                              gcggcgGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCACCCATGCTGAAGCGGGTGACGATCATg                       >  2:4717223/1‑150 (MQ=255)

                                                                                                                               cggcggGGGCCATGGTGGCGTACGCGTATGTGGGGGCCACGGCCGGGGGGTTGCCGGTGGTGGCCATGCCGGCAACCGCGGCCGGGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATgg                      <  1:8215212/150‑1 (MQ=255)

                                                                                                                                ggcggTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGc                     >  2:545066/1‑150 (MQ=255)

                                                                                                                                 gcggTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCAGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCa                    >  1:4844267/1‑150 (MQ=255)

                                                                                                                                     tGGCCTTGGTGGCGGACGGGGTGGTGGTGGCCCGGGCCGGGGGGGTGCCGGTGGTGCCCATGCCGGAAACAGGGGCTGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCa                <  1:2979331/150‑1 (MQ=255)

                                                                                                                                       gCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACg              >  1:6905311/1‑150 (MQ=255)

                                                                                                                                        ccATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACgt             >  2:5248191/1‑150 (MQ=255)

                                                                                                                                         cgtggtggCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACgtg            >  2:2776217/3‑150 (MQ=255)

                                                                                                                                         cATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACgtg            >  2:3037539/1‑150 (MQ=255)

                                                                                                                                         cATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACgtg            >  1:7365503/1‑150 (MQ=255)

                                                                                                                                         cATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACgtg            >  1:215289/1‑150 (MQ=255)

                                                                                                                                            ggtggCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACgtgggt         >  1:3327485/1‑150 (MQ=255)

                                                                                                                                             gtggCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACgtgggtg        >  1:2630115/1‑150 (MQ=255)

                                                                                                                                               ggCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTCAGTCAAACGCTGGGCGCAGCCGCAACCATGCTGCGGCGGGGGACGATCATGGCCGGCCCGtggggggg      >  2:5037811/1‑150 (MQ=255)

                                                                                                                                                  ggaagcggaagTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGGGGaa   >  2:5938198/1‑150 (MQ=255)

GTGGCCACGGTGGCGGTGGAAGCGGCGGTGGCGGTGGTCACGGTGGTGGTGGAAGCGGCGGTGGCGGTGGCCACGGTGGTGGTGGAAGCGGCGGTGGTGGTGGCCACGGTGGTGGTGGAAGTGGTGGCGGCGGTGGCCATGGTGGCGGAAGCGGAAGTGGTGGCCACGGCAGCGGCGGTGACGGTGGTGGCCATGCCGGCAACAGCGGCAGTGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGGGGAAC  >  NC_002947/1372650‑1372946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`