| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,387,281 | A→T | 5.5% | intergenic (+12/+15) | dinB → / ← PP_1204 | DNA polymerase IV/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,387,281 | 0 | A | T | 5.5% | 1361.9 / 41.5 | 414 | intergenic (+12/+15) | dinB/PP_1204 | DNA polymerase IV/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (173/216); new base T (4/20); total (177/237) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.47e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 421 total aligned reads displayed.
GACCTGGAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCCTCTTCAAG > NC_002947/1387132‑1387430 | aCCTGGAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAAt < 1:8157026/150‑1 (MQ=255) ccTGGAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATg < 2:6173324/150‑1 (MQ=255) cTGGAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGc > 1:2726532/1‑150 (MQ=255) tGGAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCa < 1:6752977/150‑1 (MQ=255) tGGAGAGTTATCGGCAATTGCTGGGGCAGGAGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCGAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCa > 2:3960432/1‑150 (MQ=255) gagaGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGc > 2:1812293/1‑150 (MQ=255) gagaGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGc < 2:5824856/150‑1 (MQ=255) gagTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCATTGCAGccc < 2:3036742/150‑1 (MQ=255) agTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGCACAGTGGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCATGGCATcccc < 2:5931094/150‑1 (MQ=255) agTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGcccc < 2:5404800/150‑1 (MQ=255) agTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGcccc > 1:2208345/1‑150 (MQ=255) agTTATCGGCAAGTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGTATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGcccc < 2:7568701/150‑1 (MQ=255) ttATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCATTGCAGCCCCtt < 2:7134647/150‑1 (MQ=255) ttATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCtt > 2:2032490/1‑150 (MQ=255) tATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTc < 2:4495204/150‑1 (MQ=255) aTCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCt < 1:6493377/150‑1 (MQ=255) tCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTa > 1:8576512/1‑150 (MQ=255) gCACTTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACTGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTa < 1:5783972/150‑1 (MQ=255) gCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTa > 1:4229045/1‑150 (MQ=255) gCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTa < 2:2188803/150‑1 (MQ=255) gCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTa > 2:4410787/1‑150 (MQ=255) cAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTaa < 1:5330100/150‑1 (MQ=255) ttGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGc > 1:6244436/1‑150 (MQ=255) gggCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCt > 1:5156140/1‑150 (MQ=255) gggCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCt < 1:2241555/150‑1 (MQ=255) gCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATcc > 2:4644301/1‑150 (MQ=255) gCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATcc < 1:5506445/150‑1 (MQ=255) gTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGc < 2:6962063/150‑1 (MQ=255) ttCGCCCGTGGCGGCAAGCCGGTGCGCTTGCGAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGcc > 2:7465054/1‑150 (MQ=255) tCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGcca < 1:6983709/150‑1 (MQ=255) cGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAAc < 2:8415717/150‑1 (MQ=255) ggcAAGCCGGTGCGCTTGCTAGGGGGAGGGGTGAGGTTGCGGGACGTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAACTGAAAGGGGCTGCACTGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCa < 2:4815256/150‑1 (MQ=255) aaGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTg > 1:8806305/1‑150 (MQ=255) aaGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTg < 1:4062894/150‑1 (MQ=255) aaGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTg > 2:4300155/1‑150 (MQ=255) cGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCt > 2:6743225/1‑150 (MQ=255) ggTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCGCCTTCTATTTATGCACGCCTGGATCCGCCACCACCCGGCCCGTGGCGtt > 2:8138829/1‑150 (MQ=255) ggTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCtt < 1:5684156/150‑1 (MQ=255) gTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTg < 2:287423/150‑1 (MQ=255) gTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTg < 2:103370/150‑1 (MQ=255) gTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTg < 2:3124568/150‑1 (MQ=255) gTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTg < 2:2772500/150‑1 (MQ=255) gTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTg > 2:6454818/1‑150 (MQ=255) tGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTgg < 1:8727920/150‑1 (MQ=255) cgcTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTa > 1:3654642/1‑150 (MQ=255) ttGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGTGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCATATGATAGGGGCTGCATTGCATCCCCTTATATTAATGCACGCCTGGATCCTCCACCAACCGGCCAGTGGCCTTGGTAAGc < 1:8334452/150‑1 (MQ=255) ttGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAGCAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGc > 1:2947912/1‑150 (MQ=255) ttGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGc > 2:3359629/1‑150 (MQ=255) gCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGa < 2:2317906/150‑1 (MQ=255) taggggtaggggTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACt > 2:7670529/1‑150 (MQ=255) gggtaggggtGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCa < 1:703852/150‑1 (MQ=255) ggtaggggtGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTTCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAg < 1:5948976/150‑1 (MQ=255) ggtaggggtGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAg < 1:1444742/150‑1 (MQ=255) gtaggggtGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAgg < 2:564272/150‑1 (MQ=255) aggggtGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGaa < 2:1235011/150‑1 (MQ=255) tGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCct > 2:5164369/1‑150 (MQ=255) tGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCct < 1:3562458/150‑1 (MQ=255) gAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAGTTCctg < 2:4129900/150‑1 (MQ=255) aGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCctgc < 1:730788/150‑1 (MQ=255) gTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCctgctg < 2:5969431/150‑1 (MQ=255) gTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCt > 1:1494288/1‑150 (MQ=255) gACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTcc < 1:4927942/150‑1 (MQ=255) gACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTcc < 2:8326803/150‑1 (MQ=255) ttGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGa < 2:1964545/150‑1 (MQ=255) gCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATc < 1:3776789/150‑1 (MQ=255) ggCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTg > 1:3801515/1‑150 (MQ=255) cgcgcATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCg < 2:3525210/150‑1 (MQ=255) gcgcATGAACCGTTGGAGCTGTTTCCGCCCAACTGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCgg < 2:3813414/150‑1 (MQ=255) gcgcATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCgg < 1:8505683/150‑1 (MQ=255) gcgcATGAACAGTTGGAGCTGTTTCCGCCCAAAGGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCACCCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCgg < 2:1479896/150‑1 (MQ=255) tGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAg > 1:4433850/1‑150 (MQ=255) aaCAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCt > 1:173237/1‑150 (MQ=255) aGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGa < 1:3360751/150‑1 (MQ=255) gTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGAt > 2:1403242/1‑150 (MQ=255) ttGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATc > 1:6365953/1‑150 (MQ=255) ggAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAg > 1:1236419/1‑150 (MQ=255) ggAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAg < 1:396784/150‑1 (MQ=255) gAGCTGTTTCCGCCCAACTGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAgg < 2:6576407/150‑1 (MQ=255) gAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTg > 2:280411/1‑84 (MQ=255) gAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAgg < 2:2543290/150‑1 (MQ=255) gAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAgg > 1:3043853/1‑150 (MQ=255) cTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGctc > 2:1636476/1‑150 (MQ=255) ttCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGtt < 2:6247138/150‑1 (MQ=255) cGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCa < 1:5412572/150‑1 (MQ=255) gCCCAAATGACAGGGGCTGCAAGGCAGCCCCTTCTATGAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCAt < 2:6284143/150‑1 (MQ=255) gCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTACTGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCGGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCAt < 2:8592983/150‑1 (MQ=255) gCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCAt < 2:5074038/150‑1 (MQ=255) cccAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCAtt > 1:2034838/1‑150 (MQ=255) aaaTGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCa > 2:865651/1‑150 (MQ=255) aaaTGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCa > 1:327449/1‑150 (MQ=255) aaTGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCAc > 2:7271598/1‑150 (MQ=255) aaGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCt < 1:4710230/150‑1 (MQ=255) ggggCTGCATTGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAg > 1:10217/1‑81 (MQ=255) gCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTg < 2:788147/142‑1 (MQ=255) gCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCctc > 2:6852772/1‑150 (MQ=255) tGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCTGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCCTCtt > 1:7753015/1‑150 (MQ=255) tGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCCTCtt > 1:4316960/1‑150 (MQ=255) tGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCCTCtt > 1:748445/1‑150 (MQ=255) aaTGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCCTCTTCaa < 1:5095332/150‑1 (MQ=255) aTGCAGCCCCTTCTATTAATGCACGCCTGGATCCACCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCCTCTTCAAg < 1:2486788/150‑1 (MQ=255) | GACCTGGAGAGTTATCGGCAATTGCTGGGGCAGGCGTTCGCCCGTGGCGGCAAGCCGGTGCGCTTGCTAGGGGTAGGGGTGAGGTTGCGTGACTTGCGGGGCGCGCATGAACAGTTGGAGCTGTTTCCGCCCAAATGAAAGGGGCTGCAATGCAGCCCCTTCTATTAATGCACGCCTGGATCCGCCACCAACCGGCCAGTGGCCTTGGTAAGCGACTGCAGGAACTCCTGCTGCAGCTCCGGATCGTTGCGGGTCAGCTCGATCAGGCTCTGTTCCATTTCACTGGCTTCCTCTTCAAG > NC_002947/1387132‑1387430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |