| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,397,874 | G→A | 13.0% | intergenic (+89/‑97) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,397,874 | 0 | G | A | 13.0% | 743.1 / 80.5 | 283 | intergenic (+89/‑97) | PP_1214/ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Reads supporting (aligned to +/- strand): ref base G (123/121); new base A (21/15); total (146/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.03e-01 | |||||||||||
Only 100 of 302 total aligned reads displayed.
CGTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGT > NC_002947/1397725‑1398023 | gCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTGTTA‑CGcc‑c > 2:1228958/1‑150 (MQ=255) cAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑Ca > 1:8579850/1‑150 (MQ=255) aaCGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CAttt < 2:8579850/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCaaa < 2:4414942/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCaaa < 2:7287465/150‑1 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAAt < 1:6442501/150‑1 (MQ=255) tATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTTAACCCGCTCCTACAGGTATTA‑CGCC‑CAGTTCAAAtg > 2:4720744/1‑150 (MQ=255) tATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCGACAGGTATTA‑CGCC‑CAATTCAAAtg > 2:4720210/1‑150 (MQ=255) aTTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAAtgt < 1:1223018/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAAtgtg < 2:806498/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAAtgtg < 1:6918821/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAAtgtg < 2:3908839/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAAtgtg < 2:1193377/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAAtgtg < 1:3751983/150‑1 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATgtggt < 1:3013242/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATgtggtg < 2:1442127/150‑1 (MQ=255) aaTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGc < 1:8224733/150‑1 (MQ=255) aaTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCGACAGGTATTA‑CGCC‑CAGTTCAAAAGGGGTGc > 2:3650429/1‑150 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCa < 2:8775225/150‑1 (MQ=255) tGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAg < 1:8249125/150‑1 (MQ=255) cccAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTa < 1:4307047/150‑1 (MQ=255) ccAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTTCAGGTATTA‑CGCC‑CAGTTCACATGTGGGGCAGTAc > 2:1360572/1‑150 (MQ=255) cAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑Cg > 2:2723547/1‑125 (MQ=255) cAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑Cg < 1:2723547/125‑1 (MQ=255) aGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCt < 1:1176751/150‑1 (MQ=255) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGt < 1:1751112/150‑1 (MQ=255) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTATCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGt < 1:3424769/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 2:4257432/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 2:3426136/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 2:7647688/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTa < 1:8552393/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTG‑CACCACATTTGAAATG‑GGCGTAATACCTGTa < 1:3558218/150‑1 (MQ=21) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAg < 1:4655724/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTG‑CACCACATTTGAAATG‑GGCGTAATACCTGTAg < 2:8547148/150‑1 (MQ=18) ccGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGa < 1:6150083/150‑1 (MQ=255) ccGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGCGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTG‑CACCACATTTGAAATG‑GGCGTAATACCTGTAGGa < 1:4598799/150‑1 (MQ=18) acgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTT‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCg < 2:5749139/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 1:3340366/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg < 1:5905019/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCggg < 1:3442599/150‑1 (MQ=255) agaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGt < 1:423765/150‑1 (MQ=255) gaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCTACAGGTATTA‑AGCC‑CATTTAAAAAGTGGTGCAGTAACGGTAGGAGCGGGtt > 2:6175089/1‑150 (MQ=255) tCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTa < 2:4123055/150‑1 (MQ=255) cATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTTCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTAc < 1:4935215/150‑1 (MQ=255) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCcgc < 2:1132720/150‑1 (MQ=255) gAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCGTTCGCGGGGAAACCCACGCCAACAGGGATTT‑ACCC‑CCGTTCAAAATTGGTGGGGGACCGGGAGGAGCGGGgtttaacgc > 1:2098368/1‑144 (MQ=255) aCCTCGGCTAAGGTGATTTGGCATTTTGTGCAAACTCTGAGCGTTTTATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCATACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGaaa < 2:1706514/150‑1 (MQ=255) ctgggCTAAGGTGATTGGGCATTTTGTGCCAACTCTGCGCGTTGGATAGCGCCTGTGCCGGCCCTTGCGCGGGTAAACCCGCTCCTACCGGTTTTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTTGGAGCGGGTTTACCCGCGAAAgg < 2:4824586/147‑1 (MQ=37) gttttGGCATTTTGGGCCAACTCTGTGCGTTTTATTGCGCCTGGGCCGGCCCTTTCGCGGGTAAACCCGCCCCTACCGGTATCC‑CGCC‑CATTTCAAAGGTGGTGCAGTCCCTGTCGGAGCGGGTTCACCCGCGAACGGGCCGGCGCAGtt < 2:1929946/148‑1 (MQ=25) gaaTTTTGGGCAAACTCTGTGCTTTTTATCGCGCCTGGGCCGGCCCTTGCGCGGGTAACCCCGCTCCTACCGTTATAA‑CGCC‑AATTTAAAATGTGGTGCTGTACCTGTAGGCGGGGTTTTACCCGCGAAAGGGCCGGCGCAGTTTGTaga < 2:3478552/148‑1 (MQ=21) ttttGTCCAAACTCGGCGCGTTTGTTCGCGCGTTGGCCGGCCCTGGCGCGGGAAACCCCGCCCCCACTGTTTTTC‑CGCC‑AATTACAATTGTGGTGCTTTACCTTTTGTCGGGGTTTTACCCGCGAACGGGCCGGCGCAGTTTGTAGAGAt < 2:564592/150‑1 (MQ=255) tttGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTG‑CGCC‑CAATTAAAATGTGGTGCCGTACCTGTAGGAGCGGGTTTACCCGCGGAAGGGCCGGCGCAGTTTGTAGAGCTg > 2:2850490/1‑150 (MQ=25) ccAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTTAAGCCGCTGCTTCAGGTATTA‑GGCC‑CATTTGAAATTTGGTGCAGTTCGTGTTTTTTCGGGTTTTACCGCGTTATGGGCGGGGGAGTTTGTAGAGATGcatcat > 2:2146876/1‑150 (MQ=255) tGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCAAACCGTAATA‑CCCC‑CAATTCAAATGTGGGGCCGGACCGGTAGGAGCGGGGTTAACCCCGAAAAGGCCGGCGCCGTTGGGAGAGATGCATAAatttttag > 2:1801119/1‑148 (MQ=255) gTTTGATCGCGCCTGTGCCGGCCCTTTCGGGGGTAACCCCGCTCCTCCCGGTTTTC‑CGCC‑CATTCCAATTGTGGTGCAGTACCTGTCGGCGCGGGTTGGCCCGCGAACGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACggg < 2:8163393/150‑1 (MQ=255) gTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTAccc > 2:5410833/1‑102 (MQ=255) gTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTAccc < 1:5410833/102‑1 (MQ=255) tttGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCTACAGGTATTA‑AGCC‑CATTTCAAATGTGGTGCAGTACCGGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGc > 2:7950531/1‑150 (MQ=255) tAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCgg > 2:7415916/1‑88 (MQ=255) cgcCTGTGCCGGCCCTTTCGCGGGTTAAACCGCTACTACAGGTTTTA‑CGCC‑CATTTGAAATTTGGTGGAGTACCTTTAGGAGCGGGTTTTGCCGCGAAAGGGGCGGCGGAGTTTGTATTGTTGCATGATTTTTTAGACGGGGTTTAtttg > 2:7210072/1‑147 (MQ=255) gggccggccgTTTCGGGGGTAACCCCGCTCCTACCGGTATTA‑GGCC‑CTTTTCAATTGTGGTGCCGTACGTGTTGGCGGGGGTTTACCCGCGAACGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGa < 2:3584284/148‑1 (MQ=255) ccGCCCGTTTCGGGGTTAAACCCGATCCTACAGTTATGA‑CGCC‑CTTTACAATTGTGGTGCAGTACCTGTCGGTGGGGGTTAACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTc < 2:7062516/150‑1 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGATTA‑CGCC‑CATTTCACATGGGGGGCAGGACCTGGAGGCGCGGGTTTACCCGCGAAAGGGCCGGCGCCGGTTGTCGGGCTGCATCATTTTTTCGCCGGGCGTTATGACTCTGGTTcg > 2:7922576/1‑149 (MQ=21) cGGCCCTTCCGGGGTTAAACCCGCGCCTACCGTTTTTC‑CGCC‑CATTTCAACTGTGGTGCCGTACCTGTAGGCGGGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCt < 2:530938/150‑1 (MQ=255) ggCCCTTTCGGGGTTAACCCCGCGCCTAC‑GGTTTTACCGCC‑CATTTAAATTGTGGTGCCTGACCTGTTGGTGGGGTTTTACCCGCTAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTa < 2:4882042/150‑1 (MQ=255) gCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCTGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAg > 1:7376970/1‑150 (MQ=255) gCCCTTTCGCGGGTAAACCCGCGCCTACAGGTAATA‑CGCC‑CAGTTCCACTGTGGTGCCGTACCGGTCGGCGCGGGGTTACCCGCGAAAGGGCCGGGGGAGGGTGGAGGGATGCATCCTTGTTGCGACGGGCTTTTTGACTCTGaggcgag > 2:5074480/1‑144 (MQ=19) tgtaggagcgGGTAAACCCGCTCCAACAGGTATTA‑CGCC‑CATTTAAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCAATTTTTAGAAGGGCTTTATGACTCTTATTCTAgg > 1:7870733/8‑150 (MQ=37) gtaggagcgGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGt > 2:5500903/7‑150 (MQ=255) taggagcgGGTTTACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGGTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTa > 1:1483635/6‑150 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAGGTACTG‑CACCACATTTGAAATG‑GGCGTAATACCGGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGAGGCATCATTTTTTCGACGGGCTTTATGACTCTGCTTCTAGGTATc > 2:4923314/1‑150 (MQ=14) ggTAAACCCGCTCCTACAGGTACTG‑CACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGAcccc > 2:2467532/1‑150 (MQ=17) gTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGt > 2:6352957/1‑48 (MQ=255) gTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCg > 1:1121538/1‑150 (MQ=255) gTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCg > 1:8754483/1‑150 (MQ=255) tAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCACATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCgg > 2:6696615/1‑150 (MQ=255) aaCCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCt > 2:3343874/1‑150 (MQ=255) aCCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTc > 1:4007392/1‑150 (MQ=255) cccGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcg > 2:7017312/1‑150 (MQ=255) cccGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCGGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCCGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcg > 2:6211940/1‑150 (MQ=255) cccGCTCCTACAGGTACTG‑CACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcg > 1:5600840/1‑150 (MQ=18) cccGCTCCTACAGGTACTG‑CACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcg > 1:5457880/1‑150 (MQ=17) ccGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:3496483/1‑150 (MQ=255) cGCTCCTACAGGTACTG‑CACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgcg > 2:5909711/1‑150 (MQ=18) gCTCCTACAGGTACTG‑CACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCgcgc > 1:2402889/1‑150 (MQ=18) cTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGACAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 1:7499470/1‑150 (MQ=255) cTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:4677478/1‑150 (MQ=255) cTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:2123632/1‑150 (MQ=255) cTACAGGTACTG‑CACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCCGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 2:7953493/1‑150 (MQ=18) cTACAGGTACTG‑CACCACATTTGAAATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa > 1:2543060/1‑150 (MQ=18) tACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:7832661/1‑150 (MQ=255) tACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:4380308/1‑150 (MQ=255) tACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:3018637/1‑150 (MQ=255) aCAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAcc > 1:6479814/1‑150 (MQ=255) cAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCg > 1:2771812/1‑150 (MQ=255) aGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCgg > 2:6063126/1‑150 (MQ=255) cGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCg > 2:1649547/1‑150 (MQ=255) gCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGt > 1:3673389/1‑150 (MQ=255) gCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGt > 1:6712019/1‑150 (MQ=255) gCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGt > 1:6636768/1‑150 (MQ=255) | CGTGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTGCCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTA‑CGCC‑CATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGT > NC_002947/1397725‑1398023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |