| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,414,084 | C→A | 5.8% | intergenic (+73/‑202) | PP_1230 → / → nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,414,084 | 0 | C | A | 5.8% | 681.2 / 17.1 | 241 | intergenic (+73/‑202) | PP_1230/nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit |
| Reads supporting (aligned to +/- strand): ref base C (162/56); new base A (16/2); total (183/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 244 total aligned reads displayed.
ATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCTGCCAGG > NC_002947/1413935‑1414232 | cGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCCCTACTACGAGGAATTCACAGTGTAGGGGCGGGTTAACCcg > 1:3639400/1‑150 (MQ=255) aaaaaTGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCcgcg > 1:6506183/1‑150 (MQ=255) gACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCGACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAgggg > 1:3447563/1‑150 (MQ=255) ttGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCACCAACGACGATTTCACAGTGTAGGGGCGGGTTCCCCCGCCAAGGGGCCCGc > 1:6210411/1‑150 (MQ=255) ttGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AAACCCCTCCAACGAGGATTTCACAGTGGAGGGGCGGGTTAACCCCCGAATGGGccccc > 1:8285471/1‑148 (MQ=255) gaagaaTTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGAGGGTTTCTCCTGTTGCGGCCCCTTCGCGGGTG‑AACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGccgcaac < 2:7172590/150‑6 (MQ=14) gaagaaTTTGCCATGTTCATGGCGGCGCAGCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTGGCTCCTGTTGCGGCCTCTTCGCGGGGG‑CACCCCCGACGACCACGAGGTCGCAGGGTTGGGGCGGGGGGACCCCCGACGGGGGCCGccc > 1:2941430/1‑148 (MQ=255) aagaaTTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGcaca > 1:7198325/1‑150 (MQ=255) aagaaTTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGcaca > 2:5723193/1‑150 (MQ=255) agaaTTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACaa > 2:8202489/1‑150 (MQ=255) agaaTTTGCATTGTTCTTGGGGGCGCATGTGGGGGCCGTGTCGCCGCTGGGGTTTTGGTTTCGCGTGTGGGGGCCTCTTCGGGGGTG‑AACCCGCTCCAACGAGTATTACACAGTGTTGGGGCGGGTACACCCGCGAAGGGGCCCGCACaa < 2:5372689/150‑1 (MQ=255) gaaTTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCCCTCCTACGAGGATTTCACACTGTAGGGGCGGGTTCACCCCCGAAGGGGCCCCCACAAg > 1:4272322/1‑150 (MQ=255) ccttGTTCATGGGGGCGCATCTGGGGGCCCTGTCGCCGCTGGGGTTATGGTTTCTCCGGTTGCGGCCTCTGGGCGGGTG‑AACCGGCTCCTACGAGGTTTTCCCTGTGTTGGGGCGGGTCCACCCGCGAAGGGGCCCGCACAAGCACTACa < 2:4292118/147‑1 (MQ=255) ccATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGGG‑TAACCCCGACAAAGACGATTTCAAAGTGTTTGGGCGGGTTGACCCCCCAAGGGGGCCGCCCAAacacaaaa > 1:2193010/1‑146 (MQ=255) aTGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACaaa > 2:5534231/1‑150 (MQ=255) aTGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACAACaaa > 2:501340/1‑150 (MQ=255) aTGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCCCTACAAACAGGATTTAACAGTGTAGGGGCGGGTTAACCCCCCAAGGGGCCCGCACAAGCACAACaaa > 1:6792139/1‑150 (MQ=255) aTGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCCCACCGAACAGGATTTAACAGGGTGGGGGGGGGGTCAACCCCCCAGGGGGCCCCACAACCACGACaaa > 1:371554/1‑150 (MQ=255) aTGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCCCACCGAACAGGATTTAACACTGTATGGGCGGGTTAAACCGCCAACGGGCCCCCACAACCACaaaaaa > 1:4765902/1‑150 (MQ=255) cggcgCATCTGGGGGCCCTGTCGCCGCGGGGGTGTGGGTTTCTCCTTTTGGGGCCTCTTGGGGGGTG‑ACCCCGCTCCTACTTGGATTTCAATGTGTTGGGGGGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTa < 2:6192595/150‑1 (MQ=255) ggcttgtGGGGGCCCGGTCGCGGCTGGGGGGTTGTTTTCTCGTGTTGGGGCCTGTTCGGGGGTG‑AACCGGCTCCTAGGTGGTTTTCACTGTGTTGGGGCGGGTTCACCGGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTa < 2:8736095/144‑1 (MQ=255) gcATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTaa > 1:628164/1‑150 (MQ=255) aTCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑TAACCGCTCCAAACAGGATTTCAAAGGGTAGGGGCGGGGTCACCCGCGAAGGGGCCCCCCCAAGCACAACAAAAAACCCAGTAGTAAta > 1:5387299/1‑149 (MQ=255) aTCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTGAGTAATc > 2:7716119/1‑150 (MQ=255) tCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCGTTAGTAATCg > 1:8009228/1‑150 (MQ=255) ggggCCCGGTCGCCGCGGGGGTTTTGTTTTCTCCTTTTGGGGCCTCTCGGCGGGTT‑AACCCCCCCCCCGGCGTTTTACAATGTGTGGGGGGGGTTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTgg < 2:2981610/150‑1 (MQ=255) gggCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGa > 2:6453269/1‑150 (MQ=255) gCCCTGTCGCCGCTGGGGTGTTGGTTTCTCGTGTTGCGGCCTCTTCGGGGGTG‑AACCCGCTCCTACTTGTTTTTCACTGTTTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGAtt < 2:484489/150‑1 (MQ=255) ccTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGt > 2:8554979/1‑150 (MQ=255) tGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGGG‑GACCCCCGCCGACGAGGGTTTGACAGGGTGGGGGGGGGGTCGCCCCCCCAGGGGGCCGCCCAACCACGACAAAAAACCCGTTAGTAATAGCGGGGttttgg > 1:1119105/1‑146 (MQ=255) gccgcAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGGG‑AACCCCCTCCGAACAGGAATTAACAGGGGTTGGGCGGGGTCAACCCCGAAGGGGGCCCCCCAAGCAAAAAAAAAAACCCGTTAGTTCTCGCGGGGGTGTATGtgg > 1:3810359/1‑148 (MQ=255) gcAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑TAACCCCGCCGAAGAGGTTTTTAAAGTTTTGGGGGGGGGTGAACCCCGAAGGGGCCCGCACAAGCACAACAAAAAAACCAGTATTAATAGCTGGTTTTTCTTTAGcca > 1:5879560/1‑149 (MQ=255) gtgggTTCCCCCTGTTGGGGCCTCTGCG‑GGGTGCACCCCGATCAAACGGGTATTCCCCAGTGTCGGGGGGGGTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTc < 2:1808699/147‑1 (MQ=255) gTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCGCCAACGAGGATTTCACAGGGGAGGGGCGGGTTCACCCGCGCAGGGGCCCGCACAAGCCCGACAAAAACCCCATTAGTAATCGCGGGATTGTCGGGAGCCGTCGgccgcccct > 1:2012098/1‑147 (MQ=255) tttCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGata > 2:8675097/1‑150 (MQ=255) ttCTCCTGTTGCGGCCTCTTCGCGGGTG‑AAACCGCTCCAAAGAGGATTTGAAAGTGTAGGGGCGGGTTCAACCCCGCAGGGGCCCGCACAATCACTAAAAAAACCCCTTTAGTAAACGCTGGAATGTCTGTAGCCATAGGCCACCGataa > 1:6324818/1‑150 (MQ=255) ttGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGGGTGGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACCAAAACCCCTGTAGTAATCGCGGGCTTGTCTGTAGCCGTCGGCCGCCGATAATAAACcgc > 2:4727390/1‑150 (MQ=38) ggCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAAACCCGTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGccc > 2:804490/1‑150 (MQ=255) atgtgggcgGGTT‑CACCCGCTCCTCGTTGGATTCCACTTTGTCGGGGGGGGTACCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCa < 1:1338655/144‑1 (MQ=255) tctTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAAACGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCag > 2:5296896/1‑150 (MQ=255) ctTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCaga > 1:5788952/1‑150 (MQ=255) gagcgGGTT‑CACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAgg > 1:8533576/3‑150 (MQ=255) gcgGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGc > 1:7053186/1‑150 (MQ=255) gcgGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGc > 2:7065550/1‑150 (MQ=255) cgGGTG‑AACCCGCTCCTACGAGTATTTCACTGTGTCGGGGGGGTTCCCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGcc < 2:6767837/150‑1 (MQ=255) gTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTg > 2:2586620/1‑150 (MQ=255) gTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTg > 2:2205356/1‑150 (MQ=255) gttaaCCCGCTCCTCCGAGTATTACACTGTGTGGGGGGGGGTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTg < 1:601512/147‑1 (MQ=255) g‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGc > 1:7644071/1‑150 (MQ=255) accccGCTCCTACGTGGTTTTCACAGTGTCGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCg < 2:1960178/148‑1 (MQ=255) aCCCGCTCCTCCGTGTTTTTCACTGTTTCGGGGGGGGTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg < 2:1173281/150‑1 (MQ=255) aCCCGCTCCTACGAGTATTTCACAGTGTTGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg < 2:4174493/150‑1 (MQ=255) aCCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg > 2:3887040/1‑150 (MQ=255) aCCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg > 2:393572/1‑150 (MQ=255) aCCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCgg > 2:2393462/1‑150 (MQ=255) cccGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGt > 1:205898/1‑150 (MQ=255) cccGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGt > 1:6752418/1‑150 (MQ=255) cccGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACAACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGt > 1:2324065/1‑150 (MQ=255) cccGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGAGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGt > 1:2428860/1‑150 (MQ=255) ccGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTc > 1:5522727/1‑150 (MQ=255) ccGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCACGCCCGCAGAGGGCCGTGGCGGTc > 2:1573868/1‑150 (MQ=255) gCTCCTACGAGGATTTCACCGTGTCGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCaa < 2:5110549/150‑1 (MQ=255) tCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACa > 1:309883/1‑150 (MQ=255) tCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCGTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACa > 2:4071490/1‑150 (MQ=255) cccTACGAGTTTTCCACTGTGTCGGGGGGGTTCCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACa < 1:1350464/149‑1 (MQ=255) cTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATg > 2:426176/1‑150 (MQ=255) cTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATg > 1:6948267/1‑150 (MQ=255) tACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGc > 1:6567532/1‑150 (MQ=255) aCGAGGATTTCACTGTTTAGGGGCGGGTTCCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCatttttcg < 2:3639400/150‑8 (MQ=255) aCGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAGCATGcc > 2:222848/1‑150 (MQ=255) aCGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGcc > 1:1750671/1‑150 (MQ=255) cGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCg > 2:3443414/1‑150 (MQ=255) gAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:8774176/1‑150 (MQ=255) gAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:7582829/1‑150 (MQ=255) gAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGt > 2:6012875/1‑150 (MQ=255) agtttttCACATTGTTGGGGGGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTc < 2:2677908/146‑1 (MQ=255) ttccctgtgtTGGGGGGGGTTCCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCa < 2:5462855/144‑1 (MQ=255) cacaGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGACCGGCAcc > 1:3849610/1‑150 (MQ=255) acaGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCAGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCAccc > 2:7667104/1‑150 (MQ=255) aGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCtt > 1:3388514/1‑150 (MQ=255) gtgtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTa > 2:3754833/1‑150 (MQ=255) tgtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAg > 1:5122725/1‑150 (MQ=255) gtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGc > 2:4403729/1‑150 (MQ=255) gtAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGc > 1:4980770/1‑150 (MQ=255) tgtcagCGGGTTCACCCGCGAAGAGG‑CCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCg > 2:4096404/6‑150 (MQ=255) tAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGcc > 2:746060/1‑150 (MQ=255) cttcgCGGGTGAACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCg > 1:5723039/5‑150 (MQ=255) cttcgCGGGTGAACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCg > 1:568252/5‑150 (MQ=255) ttcgCGGGTGAACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGc < 1:7339969/116‑1 (MQ=255) ttcgCGGGTGAACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGc > 2:7339969/4‑119 (MQ=255) ttcgCGGGTGAACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGa > 1:1455854/4‑150 (MQ=255) ggggCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGa > 1:31476/1‑150 (MQ=255) tcgCGGGTGAACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGAt > 1:4358570/3‑150 (MQ=255) gggCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGAt > 1:8729589/1‑150 (MQ=255) gggggTGCCCCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCt < 2:6280061/148‑1 (MQ=255) gCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCt > 2:5947216/1‑150 (MQ=255) ggtaacACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCTGc < 1:956136/145‑1 (MQ=255) gggTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCTGc > 2:3033815/1‑150 (MQ=255) ggTACACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCTGcc < 1:5226436/150‑1 (MQ=255) gTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCTGCCa > 2:345102/1‑150 (MQ=255) | ATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTG‑AACCCGCTCCTACGAGGATTTCACAGTGTAGGGGCGGGTTCACCCGCGAAGGGGCCCGCACAAGCACTACAAAAACCCCTTTAGTAATCGCTGGATTGTCTGTAGCCTTCGGCCTCCGATAATAATCCGCGCCCGCAGAGGGCCGTGGCGGTCAACATGCCGTCCGGCACCCTTAGCCGATCTGCCAGG > NC_002947/1413935‑1414232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |