| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,469,147 | T→G | 7.4% | Q476P (CAG→CCG) | algX ← | alginate biosynthesis protein AlgX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,469,147 | 0 | T | G | 7.4% | 654.3 / 6.8 | 276 | Q476P (CAG→CCG) | algX | alginate biosynthesis protein AlgX |
| Reads supporting (aligned to +/- strand): ref base T (133/108); new base G (4/25); total (143/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.89e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 304 total aligned reads displayed.
TCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGG > NC_002947/1468998‑1469296 | aCCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCctgcctgc > 1:141054/1‑150 (MQ=255) aCCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGActgcctgc > 1:5777933/1‑150 (MQ=255) cGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTgcgc < 1:5168870/150‑1 (MQ=255) cGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTgcgc < 2:4054796/150‑1 (MQ=255) tCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGt < 2:1438969/150‑1 (MQ=255) tCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGt > 1:4345714/1‑150 (MQ=255) cTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTc < 2:2612121/150‑1 (MQ=255) aGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTgcg > 2:8668383/1‑150 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCACACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCa < 2:7318683/150‑1 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTGTgcgct > 1:7601318/1‑149 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTgcgcc > 1:6281858/1‑149 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCa < 1:7368441/150‑1 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg < 2:3369195/150‑1 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg > 2:7449091/1‑150 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg > 2:5819080/1‑150 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg > 2:1032729/1‑150 (MQ=255) tttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGGCTGCGCAgg > 1:2442543/1‑150 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCAc > 2:3799968/1‑150 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCAc < 1:4373459/150‑1 (MQ=255) gATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACg > 2:466417/1‑150 (MQ=255) gATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACg > 2:5323723/1‑150 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCCCgg > 1:8494650/1‑150 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGTAAATTCGTTTTAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGaa < 2:6508832/150‑1 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGac > 2:1492680/1‑149 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 1:8023579/1‑150 (MQ=255) ccTGGTAGTAACCCGGCGGCGGTACCAGCGCGGCGGGCGCGGCACCACCAACCACGGCCAACGCGAGCCGGGGGGGGCTGTAATTTCGTTTGAAACGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGGGGTCTGCGCCGGCACGGCGaa < 2:5700865/150‑1 (MQ=255) ggTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGCAgtt > 1:1124571/1‑150 (MQ=255) gtagtaCCCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCACCGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAACGGGTCATGGGTCGCCTCACTGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAgttg < 2:7953804/150‑1 (MQ=255) tgtcaCCCTGCGGCGGTACCCGCGCGGCGTGCGCGGCACCACCAAACACGGCCAAGGCGAGCCGGGGGGGGCTGGAAATTCGTTTGAAATGGGTCATGGGTCGCCTCACTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAgttgtt < 2:8068660/146‑1 (MQ=255) taACCCTGGGGCGGTACCCGCGCGGCGTGCGCGGCACCACCAACCACGGCCACCGCGAGCCGGGGGGGGCTGGAAATTCGTTTGAACAGGGTCCTGGGTCGCCTCACTGGCCGGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGc < 2:4191168/150‑1 (MQ=255) aCCCTGCGGCGTTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCAAACGCGAGCAGGGCGGGGCTGGAAATTCTTTTGAAAAGGGTCTTGGGTCGCCTCACTGGCCTGCCTGCGGGGTCTGCGCCGGCACGGCGAAGTTGTTGCGt < 2:3562588/150‑1 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 2:2528377/1‑150 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 2:1801486/1‑150 (MQ=255) ccTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGttt > 1:5711293/1‑150 (MQ=255) gcggTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCagag > 1:5561540/1‑150 (MQ=255) gggcaCCCGCGCGGCGTGCGCGCCCCCACCAAACCCGGCCAACGCGCGCCGGGGGGGGCTGCAATTTGTTTTGAAATGGTTCTTGGGGCGCCTCACTGGCGGGCCTGCGGGGTCTGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGc < 2:2508974/146‑1 (MQ=255) gggcaCCCGCGCGGCGTCCGCGGCCCCACCAAACACGCCCACCCGGCGCCGGGGGGGGCTGCAATTCCGTTTGAAACGGGTCTTGGGCCGCCCCACGGGCCGGCGGGGGCGGCCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGc < 2:434427/146‑1 (MQ=255) tACCCGCGCGGCGTGCGCGCCACCACAAAACACGGCCACCGCGAGCCGGGCGGGGCTTTAATTTCTTTTGAAAAGGGTCTTGGGTCGCCTCACGGGCCTGCCGGCGGGGCCGGCCCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTg < 2:5953008/150‑1 (MQ=255) tACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTg > 1:6518019/1‑150 (MQ=255) cAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGACATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCt > 2:7840337/1‑150 (MQ=255) tgcgcGGCGTGCGGGGCACCACCAAACACGGCCAACGCGAGCTGGGCGGGGCTGTAATTTGGTTTTAAAAGGGTCTGGGGTCGCCTCCCGGGCCGGCGTGCGCGGTCGGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCtt < 2:4911184/149‑1 (MQ=255) cgcggGGGGTGCGCGCCACCACAAAACACGGCCACCGCGAGCTGGGGGGGGCTGTAAATTGTTTTTAATTGGTTATTGGGTCGCCACACGGGCCTGCCTGGGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCtt < 2:315492/149‑1 (MQ=255) gcgcGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCAGCGCGGTCTGCGCAGGCACGGCGCAGTTGTTGCGTTTGCAGAGCTTGGCTTc > 1:2381488/1‑150 (MQ=255) ggcgcGGAACCACCAACAAAGGCCAACGCGAGCTGGGCGGGGCTGGAAATTCGTTTGAAACGGGTCAGGGGTCGCCTCACTGGCCTGCCTGCGCGGCCTGCGAAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 2:1993672/149‑1 (MQ=255) gcgcgcCACCACCAAACACGCCCACCGCGAGCCGGGGGGGGCTGCAAATTCGTTTGAAATGGGTCATGGGCCGCCACACGGGCCGGCCTGCGGGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTg < 2:6223916/150‑1 (MQ=255) gcgcGGCACCACCAAACACGCCAAACGCGAGCTGGGGGGGGCTTTAAATTCTTTTTAAATGGTTCTGGGGTCGCCTCACGGGCGTGCCTGCGCGTTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTg < 1:7288531/150‑1 (MQ=255) cgcgCCACCACAAAACACGCCCACCGCGAGCCGGGCGGGGGTGTAAATTCTTTTGAAAAGGGTCTTGGGTCGCCTCACTGCCCGGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTgg < 2:1586025/150‑1 (MQ=255) cgccaccacCAAACACGGCCACGGCGCGCCGGGGGGGGCTTTAATTTCTTTTTAAACGGTTCTTGGGGCGCCCCACGGGCCTGCCGGCGCGGTCGGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGt < 1:1974970/147‑1 (MQ=255) gCACCACCAAACACGGCCAACGCGAGCTGGGCGGGGCTGCAATTTCTTTTGAAACGGGTCTTGGGTCGCCTCAGTGGCCGGCCGGCGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGc < 1:7224063/150‑1 (MQ=255) gCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCAGGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGACGTGGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGc > 2:5005294/1‑150 (MQ=255) accaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCtt > 2:237054/1‑150 (MQ=255) accaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGAGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCtt > 1:6068888/1‑150 (MQ=255) ccaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCttt > 2:8435203/1‑150 (MQ=255) caAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGGCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCATGGCTTAGAACTTCTGGGTGCCGCGTTc > 1:387488/1‑150 (MQ=255) aaccacggCCACCGCGAGCAGGGCGGGGCTGGAAATGCGTTTGAAACGGGTCATGGGGCGCCCCACGGGCCGGCCTGCGGGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTcc < 2:1892769/144‑1 (MQ=255) aaCACGGCAACCGCGCGCTGGGGGGGGCTGTAAATTCTTTTCAACTGGGCCTGGGGCCCCCCCCGGGGCCGGCCGGGGGGTTCTGCGCGGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCg < 1:330582/150‑1 (MQ=255) cacggCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCGGCCTGCGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGc < 2:5096201/147‑1 (MQ=255) ccggCCAACGCGCGCTGGGGGGGGGTGTAATTTCTTTTGAAACGGGCCCTGGGTCGCCTCCTGGGCCGGCCGGCGGGTTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGcc < 2:2183811/148‑1 (MQ=255) aaGGCAAACGCGTGCTGGGGGGGGCTTTAATTTCTTTTTAAATGGTTCTTGGTTCGCATAACTGGCCGGCGTGCGGGTTTTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGcc < 1:2703845/150‑1 (MQ=255) cggCCACCGCGCGCGGGGGGGGGGTGTAATTTCTTTTGAAATGGTTCTGGGGTCGCCCCACTGGCGGGCGGGGGGGGTGGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:3239671/149‑1 (MQ=255) ccAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTg > 1:1352694/1‑150 (MQ=255) cAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGt > 2:5249530/1‑150 (MQ=255) gcgAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCt > 2:6794178/1‑150 (MQ=255) gAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCg > 2:6952200/1‑150 (MQ=255) gctgggCGGGGCTGGAAATTCGTTTGAAATGGGTCATGGGTCGCCTCACGGGCCTGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGaa < 2:1361445/147‑1 (MQ=255) gCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTACGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGaa < 1:3682858/150‑1 (MQ=255) ggggggggGTGTAATTTCTTTTTAAATGGGTCTTGGGTCGCCTCAGTGGCCTGCCTGCGCGGTCGGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcgc < 1:4864910/150‑1 (MQ=255) gggCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcgc > 2:4130141/1‑150 (MQ=255) ggCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcgcg > 1:6961078/1‑150 (MQ=255) cTGTAATTTCTTTTCAAAGGGGCGAGGGGCCGCCTCCGGGGCGTGCCGGCGGGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGgc < 1:4763814/150‑1 (MQ=255) gAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTTGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCACGAACGCGAGCAGGCgct > 1:1831496/1‑150 (MQ=255) aatttgttttCAAACGGGTCTGGGGTCGCCTCCGGGGCCTGCCTGCGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctg < 2:2442528/143‑1 (MQ=255) aaaTTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctg > 2:6329851/1‑150 (MQ=255) gTTTGAAACGGGTCATGGGTCGCCTCACTGGCCGGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCtggctggc < 2:2135657/150‑1 (MQ=255) tttGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc > 2:7161810/1‑150 (MQ=255) tttCAAAAGGGTCATGGGTCGCATCACTGCCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc < 2:7601318/150‑1 (MQ=255) ttGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGccc < 2:8470947/150‑1 (MQ=255) aaaaGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACCGCGAAGTTGTTGCGTTTGCAGAGCTTTGCTTCGACCGTCTGGGTGCCGCTTTACGGCCCCTGTACCTCGAAAGCGAGCAGGCGCAGGCTGGCCCAGt > 1:2488447/1‑150 (MQ=255) ggtgcttGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc < 2:4799756/144‑1 (MQ=255) gggcctggggCCGCCCCCCGGGCCTGCCTGGGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc < 1:4029531/143‑1 (MQ=255) gggTCTGGGGTCGCCTCCGGGGCCGGCCGGCGCGGTGGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc < 1:1211390/150‑1 (MQ=255) tCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTc > 2:8583340/1‑150 (MQ=255) ggTCGCCTCACGGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgc < 2:8223468/150‑1 (MQ=255) gTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgcg > 1:7208004/1‑150 (MQ=255) gTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgcg > 1:8524067/1‑150 (MQ=255) gCCTCCCGGGCCGGCCGGCGGGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCAt < 2:1124571/150‑1 (MQ=255) cTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCt > 2:4366436/1‑150 (MQ=255) tcgggCCTGCGGGCGGGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGa < 1:6399965/147‑1 (MQ=255) ccTGGCGTGCCTGGGGGGTCTGCTCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGa < 1:7477243/149‑1 (MQ=255) aCTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCACATCTGGa < 1:8727619/150‑1 (MQ=255) aCTGGCCTGCCTGCGCGGGCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCATCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCACGTCTTCGCGCAAATGGa > 1:1775651/1‑150 (MQ=255) cTGGCCTGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGaa < 2:2805979/150‑1 (MQ=255) ccctgcctgCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGAc > 1:7004185/2‑150 (MQ=255) gtgcctgcGCAGACCGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 2:3735592/2‑150 (MQ=255) gtgcctgcGCAGACCGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 2:7233911/2‑150 (MQ=255) ctgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:3851494/1‑150 (MQ=255) ctgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:4671435/1‑150 (MQ=255) ctgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 1:5309763/1‑150 (MQ=255) cctgcGCAGACCGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGc > 2:3450082/1‑150 (MQ=255) gtgcGCGTTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCg < 1:2845702/149‑1 (MQ=255) | TCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGG > NC_002947/1468998‑1469296 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |