| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 188,613 | T→C | 5.5% | L241P (CTG→CCG) | PP_0165 → | GGDEF domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 188,613 | 0 | T | C | 5.5% | 1061.9 / 29.8 | 330 | L241P (CTG→CCG) | PP_0165 | GGDEF domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (159/151); new base C (6/12); total (165/165) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
Only 100 of 332 total aligned reads displayed.
ATTCCTCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACC > NC_002947/188464‑188762 | tCCTCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGa < 2:8657752/150‑1 (MQ=255) cTCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGAcc > 1:7148512/1‑150 (MQ=255) cTCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGAcc > 1:6306403/1‑150 (MQ=255) cTCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGAcc > 1:1670895/1‑150 (MQ=255) cTCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGAcc > 2:8199109/1‑150 (MQ=255) cTCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGAcc < 1:511495/150‑1 (MQ=255) tCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCg > 1:3441965/1‑150 (MQ=255) aGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCggg > 2:6753217/1‑150 (MQ=255) gCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGc < 2:7220815/150‑1 (MQ=255) ccTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCt < 2:856530/150‑1 (MQ=255) gCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTc > 2:3321805/1‑150 (MQ=255) gCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTc < 2:5192689/150‑1 (MQ=255) ccAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCg > 1:5995637/1‑150 (MQ=255) cAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTcct < 1:3778284/150‑3 (MQ=255) cAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTcct < 1:195353/150‑3 (MQ=255) cAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTcct < 1:4777948/150‑3 (MQ=255) cAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTcct < 1:6858244/150‑3 (MQ=255) agagTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGaa > 1:318197/1‑150 (MQ=255) gagTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAAc < 1:8300291/150‑1 (MQ=255) gagTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAAc < 2:5421178/150‑1 (MQ=255) gTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTcctggta < 2:2693662/150‑7 (MQ=255) ttGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAAccgc < 2:5276426/150‑1 (MQ=255) tGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAAccgcc < 2:1120543/150‑1 (MQ=255) gCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAAccgccg > 2:4154242/1‑150 (MQ=255) acgcacgcCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTa > 1:3707902/1‑150 (MQ=255) gcCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGa < 1:5359349/150‑1 (MQ=255) cGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGaaa < 1:6077032/150‑1 (MQ=255) tACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGc > 2:3206156/1‑150 (MQ=255) aCGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCt > 1:7194894/1‑150 (MQ=255) cgccgcGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTg < 2:73199/150‑1 (MQ=255) cgccgcGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTg > 1:8769461/1‑150 (MQ=255) gccgcGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGa > 2:1661582/1‑150 (MQ=255) gccgcGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGa < 1:3330131/150‑1 (MQ=255) gccgcGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGa > 1:5208402/1‑150 (MQ=255) gTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAAt > 2:2969233/1‑150 (MQ=255) gTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTTGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCgg < 1:4820644/150‑1 (MQ=255) cAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTa > 1:5029054/1‑150 (MQ=255) aaGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTaa > 2:3962659/1‑150 (MQ=255) aaGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTaa < 2:6396021/150‑1 (MQ=255) aaGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTaa > 1:1317230/1‑150 (MQ=255) gCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGc > 2:7175434/1‑150 (MQ=255) aTGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAAc < 1:6649821/150‑1 (MQ=255) aaCCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTg > 1:1441224/1‑150 (MQ=255) aaCCAGATGGTCGAGAAACTCAAAGCCCTGATCACCGAGCAGGCCGAGCGCAGTGAGTGGCTGCGAGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTg > 1:6438278/1‑150 (MQ=255) aCCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTgg > 1:1085722/1‑150 (MQ=255) cAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGaa < 1:6561967/150‑1 (MQ=255) aTGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAc < 2:8410020/150‑1 (MQ=255) aTGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAc > 1:116505/1‑150 (MQ=255) ggTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAcgc > 1:4528868/1‑150 (MQ=255) ggTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAcgc < 2:1988480/150‑1 (MQ=255) tCGAGAAACTCAAAGCCCTGTTCACCGAGCATGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTAACAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATTCAGCTGAACAATCGGGTAAGCAACCTGTAAGAcgcgc > 1:4853047/1‑150 (MQ=255) tCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAcgcgc < 2:3492939/150‑1 (MQ=255) gagaAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAcgcgcgc > 1:2567562/1‑150 (MQ=255) gagaAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTcc > 1:1249980/1‑89 (MQ=255) agaAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCTCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAcgcgcgcg < 1:4462537/150‑1 (MQ=255) aaaCTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGcc < 2:7748561/150‑1 (MQ=255) aaaCTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGcc < 1:6984098/150‑1 (MQ=255) aaCTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCg < 1:2870345/150‑1 (MQ=255) cTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGt > 2:694322/1‑150 (MQ=255) aGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACACTCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACct < 2:3611911/150‑1 (MQ=255) tGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGt < 1:7257183/150‑1 (MQ=255) tGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGt > 2:3154341/1‑150 (MQ=255) gTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGtt > 2:1948122/1‑150 (MQ=255) cACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTtgct < 1:7625777/150‑1 (MQ=255) aCCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTtgctg > 1:8253624/1‑150 (MQ=255) ccGAGCAGGTCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTtgctgc < 1:7378395/150‑1 (MQ=255) cGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCg > 1:5849426/1‑150 (MQ=255) gAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCgg < 1:4028890/150‑1 (MQ=255) cGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAggg < 2:6306403/150‑1 (MQ=255) gAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGCACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGc < 2:44710/150‑1 (MQ=255) tGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCctggctgg > 1:5410973/1‑150 (MQ=255) tGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCctggctgg > 2:5995479/1‑150 (MQ=255) ggcctgCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCtggctggc < 2:5013882/145‑1 (MQ=255) gAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCtggctggc < 2:5385955/150‑1 (MQ=255) aGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGcc < 2:7378955/150‑1 (MQ=255) aGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGcc < 2:144591/150‑1 (MQ=255) cTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAc < 1:8640254/150‑1 (MQ=255) tgcgtgcgGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAcg > 1:4195403/1‑150 (MQ=255) cgtgcgGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAcgcc > 2:4323747/1‑150 (MQ=255) gtgcgGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAcgccc < 2:5778818/150‑1 (MQ=255) gAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCtt > 1:5586401/1‑150 (MQ=255) cTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcgg > 2:8617555/1‑150 (MQ=255) tACCAGGACAGCCTGACTGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcggc < 1:3089106/150‑1 (MQ=255) tACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcggc > 1:2323425/1‑150 (MQ=255) tACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcggc > 2:6057219/1‑150 (MQ=255) tACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcggc > 2:6235222/1‑150 (MQ=255) tACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcggc > 1:2394391/1‑150 (MQ=255) tACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcggc < 2:7582777/150‑1 (MQ=255) tACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcggc > 2:7015354/1‑150 (MQ=255) aCCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAg < 1:5720936/116‑1 (MQ=255) ccAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCa > 2:1316395/1‑150 (MQ=255) ccAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCa < 2:2342397/150‑1 (MQ=255) ttcgACAGCCCGGTCAGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAg > 1:2739830/4‑150 (MQ=255) gACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGt > 1:7779321/1‑150 (MQ=255) gACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCAAggcgggcgttca < 2:668860/150‑8 (MQ=255) ccTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGa > 1:7479215/1‑150 (MQ=255) ccTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGa > 2:4671896/1‑150 (MQ=255) ccTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGa > 1:8321090/1‑150 (MQ=255) ccTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGa > 2:3443377/1‑150 (MQ=255) cTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGAc < 1:923683/150‑1 (MQ=255) | ATTCCTCAGCCTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTCGAACCGCCGCTATTTTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACC > NC_002947/188464‑188762 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |