| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,509,025 | T→A | 5.9% | intergenic (+34/‑229) | rpsI → / → petA | 30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,509,025 | 0 | T | A | 5.9% | 1069.3 / 36.6 | 333 | intergenic (+34/‑229) | rpsI/petA | 30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit |
| Reads supporting (aligned to +/- strand): ref base T (128/185); new base A (7/13); total (135/198) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.57e-01 | |||||||||||
Only 100 of 349 total aligned reads displayed.
CCCTGCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCATGACG > NC_002947/1508876‑1509174 | ccTGCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCtt > 2:5378790/1‑150 (MQ=255) ccTGCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCtt > 2:5060216/1‑150 (MQ=255) cTGCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTg > 2:2210228/1‑150 (MQ=255) gCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGa < 1:2944729/150‑1 (MQ=255) ggCGCTCTGGGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGATGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCg < 1:1679752/150‑1 (MQ=255) gcgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCgg < 1:395496/150‑1 (MQ=255) gcgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCgg < 2:5716001/150‑1 (MQ=255) gcgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCgg < 2:3933855/150‑1 (MQ=255) gcgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCgg < 2:2564447/150‑1 (MQ=255) gcgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCAAGGAACCgg < 1:6598501/150‑1 (MQ=255) gcgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCAAGGAACCgg < 1:7438775/150‑1 (MQ=255) cgcTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCAAAAAAAGCCCGG‑TTCCAAGGAACCggg < 1:2324766/150‑1 (MQ=255) ctctGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCAAGGAACCGGGC‑t < 2:8800831/150‑1 (MQ=255) ctGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑ttt < 2:341232/150‑1 (MQ=255) gtcgtGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCAAGGAACCGGGC‑ttttttc < 1:4172238/150‑2 (MQ=255) cgtGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑ttttttttt < 2:7763736/150‑1 (MQ=255) gtGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTa < 1:2544425/150‑1 (MQ=255) ggCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCtt < 2:6648596/150‑1 (MQ=255) tACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGaa > 2:3652933/1‑150 (MQ=255) tACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGaa < 2:3150469/150‑1 (MQ=255) tACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGaa > 1:4256137/1‑150 (MQ=255) tcGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGATAGTGGGTCTGCGTAACGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAAc < 1:8417906/149‑1 (MQ=255) aCCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAAcc > 1:7749243/1‑150 (MQ=255) ccGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTg > 1:5762927/1‑150 (MQ=255) gACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTcag < 2:6877330/150‑1 (MQ=255) gCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTcagcag > 2:2782640/1‑150 (MQ=255) tCGTGAGGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGcagtc < 1:4620258/150‑1 (MQ=255) tCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGACCCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGcagtc > 1:5234717/1‑150 (MQ=255) tCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGcagtc > 2:1427208/1‑150 (MQ=255) tGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGCCAGcagtcagt < 1:3566260/150‑1 (MQ=255) gAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTg < 2:8758839/150‑1 (MQ=255) caGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTgg < 2:7296814/149‑1 (MQ=255) aaGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTgg < 1:557094/150‑1 (MQ=255) aGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGc < 2:7915595/150‑1 (MQ=255) aGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGc < 2:5323052/150‑1 (MQ=255) gTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGcc < 1:1957289/150‑1 (MQ=255) gTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGcc < 2:838246/150‑1 (MQ=255) gTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGcc < 1:7551541/150‑1 (MQ=255) ttGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCg > 1:7209979/1‑150 (MQ=255) tGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGc < 1:5205730/150‑1 (MQ=255) aGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑GTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCtt < 1:2828943/150‑1 (MQ=255) gTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTc < 2:6057264/150‑1 (MQ=255) aaGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGc < 2:5774799/150‑1 (MQ=255) aGAAAGTGCGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTATTTTTTAGCCTTGAACTAACCTGTCAGCAGTCCGTGGCCGCTTGTCGCa > 2:677251/1‑150 (MQ=255) aaaGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATa < 1:4540630/150‑1 (MQ=255) aGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGA‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGa < 2:2901106/150‑1 (MQ=255) gTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGAc < 1:7348512/150‑1 (MQ=255) ggTCTGTGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTa > 2:4633578/1‑150 (MQ=255) ggTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTa < 2:5985130/150‑1 (MQ=255) tCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCTGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGa > 2:833154/1‑150 (MQ=255) tCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGa > 1:2049432/1‑150 (MQ=255) tCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCAGAGACGTAGa > 2:5224147/1‑150 (MQ=255) cGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCaa > 1:2257047/1‑150 (MQ=255) cGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCaa < 1:965906/150‑1 (MQ=255) gTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAATCCCGGTTTCGTTGTAACC‑GGC‑TTTTTTTTTTGCCATGTACGAAACTGTGAGCACTCAGGGGGCGCGTGTGGCCTAGACGTTGATGAAg > 1:5880812/1‑150 (MQ=255) gTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAg < 1:8213101/150‑1 (MQ=255) tAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGc > 2:4596508/1‑150 (MQ=255) aaGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCaa > 2:8169130/1‑150 (MQ=255) gcgcGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTGCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCAGTAAGCAGACAGTGGCCGCTTGTCGCATAGACGTAGATCaataaaac > 1:3730524/1‑144 (MQ=255) cgcgTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGc > 1:7063024/1‑150 (MQ=255) cgTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTGGATCaagcgaagcgg > 1:8544241/1‑149 (MQ=255) gTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTg < 1:5074392/150‑1 (MQ=255) tAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTgg < 1:1433422/150‑1 (MQ=255) gTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCCAAGCGTGGGTTGt > 1:44364/1‑150 (MQ=255) tCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTc < 1:1025990/150‑1 (MQ=255) tCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGcc > 2:3246166/1‑150 (MQ=255) cAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGccc > 2:8657300/1‑150 (MQ=255) aGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCt < 1:3075258/150‑1 (MQ=255) tCCAAGCGTTACTACCGCTTCGGCAGTCGAAAAAAGCCCGG‑GTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCg < 2:4846198/150‑1 (MQ=255) cgaaGCGGTATTAACGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCgg > 1:159818/3‑150 (MQ=255) cAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGTGTGGGTTGTCGCCCTTGCCggg > 1:5945148/1‑150 (MQ=255) aaGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCgggg < 2:4495113/150‑1 (MQ=255) aTACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGcc > 2:2018043/1‑132 (MQ=255) ccGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTGACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTg > 2:1201347/1‑150 (MQ=255) ccGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCGTg > 1:6707799/1‑150 (MQ=255) cGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGt < 1:4772274/150‑1 (MQ=255) gCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTc > 2:4152082/1‑150 (MQ=255) cTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCa < 1:8013628/150‑1 (MQ=255) cTTCGGCAGTCGAAAAAAGCCCGG‑GTCCATGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCCTAGACGTAGATAAAGCAAATCCTGGGTTGTCCCCCATGCCGGGGTAATCACCATGTCa > 1:3703330/1‑150 (MQ=255) tCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGTCCTTGCCGGGGTAATCACCTTGTCAgt < 2:5128313/150‑1 (MQ=255) aGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGCTTTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAgtgtgt < 1:5377683/150‑1 (MQ=255) gTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTgg < 1:1317897/150‑1 (MQ=255) aaaaaaGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGAttt < 1:107007/150‑1 (MQ=255) aaaaaaGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGAttt < 2:419446/150‑1 (MQ=255) aaaaaaGCCCGG‑TACCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGAttt < 1:3301794/150‑1 (MQ=255) aaaaGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGt < 2:1638501/150‑1 (MQ=255) aaGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGttt < 2:3987028/150‑1 (MQ=255) aaGCCCGG‑GTCCTTGGAACCGGGC‑ATTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGttt < 1:2741568/150‑1 (MQ=255) aGCCCGG‑TTCCTTGGAACCGGGC‑ATTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTc < 2:7453869/150‑1 (MQ=255) gCCCGG‑TTCCAAGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCt > 2:3801327/1‑150 (MQ=255) gCCCGG‑GTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCt < 2:6897611/150‑1 (MQ=255) cccGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCtt > 2:3441395/1‑150 (MQ=255) cccGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCtt > 1:7717084/1‑150 (MQ=255) ccGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTa < 2:1055418/150‑1 (MQ=255) ctg‑TTCATTTGTACCGGTC‑TTTTTTTTTAGCCTTGAACTCACCTGTCAGCAGTCAGTGTCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTTGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTAc < 1:7617189/148‑1 (MQ=255) g‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCGCCTTGTCAGTGTGTGGATTTGTTTCTTACCa > 2:7598694/1‑150 (MQ=255) g‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCa < 2:5831662/150‑1 (MQ=255) ttGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCATGACg > 2:7181595/1‑150 (MQ=255) ttGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCATGACg > 2:2533989/1‑150 (MQ=255) ttGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCATGACg > 1:5439676/1‑150 (MQ=255) | CCCTGCGTGGCGCTCTGCGTCGTGCTGGCTACGTCACCCGCGACGCTCGTGAAGTTGAGCGTAAGAAAGTGGGTCTGCGTAAAGCGCGTAAGCGTCCTCAGTACTCCAAGCGTTAATACCGCTTCGGCAGTCGAAAAAAGCCCGG‑TTCCTTGGAACCGGGC‑TTTTTTTTTAGCCTTGAACTAACCTGTCAGCAGTCAGTGGCCGCTTGTCGCATAGACGTAGATCAAGCAAAGCGTGGGTTGTCGCCCTTGCCGGGGTAATCACCTTGTCAGTGTGTGGATTTGTTTCTTACCATGACG > NC_002947/1508876‑1509174 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |