| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 27,584 | A→G | 9.9% | intergenic (‑431/+15) | PP_0022 ← / ← PP_0023 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 27,584 | 0 | A | G | 9.9% | 839.7 / 59.4 | 295 | intergenic (‑431/+15) | PP_0022/PP_0023 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (136/128); new base G (18/11); total (156/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.84e-01 | |||||||||||
Only 100 of 310 total aligned reads displayed.
CAGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCATGCAAAA > NC_002947/27435‑27733 | cAGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCga > 1:6638608/1‑150 (MQ=255)cAGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCga > 2:6848426/1‑150 (MQ=255)cAGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCga < 1:7073379/150‑1 (MQ=255)cAGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCga < 2:7813962/150‑1 (MQ=255) gTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAAGCAGCTCCCgag > 2:8616903/1‑150 (MQ=255) tctcGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGagag > 1:3303850/1‑150 (MQ=255) tcgtcgTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAgct > 2:5468972/1‑150 (MQ=255) gtcgtcCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAgctgc > 1:7895146/1‑150 (MQ=255) cgtcCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCTCGGGAGCTGC‑tt < 1:8812848/150‑1 (MQ=255) gtcCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCTCGGGAGCTGC‑ttt < 1:6460593/150‑1 (MQ=255) gtcCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCTCGGGAGCTGC‑ttt < 1:7151406/150‑1 (MQ=255) tcCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAAGCAGCTCTCGGGAGCTGC‑ttt < 1:2575081/150‑1 (MQ=255) ccGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑ttttt < 1:7654895/150‑1 (MQ=255) ccGCACTGAAGGCATAACCGATCCGGAGGTAGCTTCAGAATCCAACAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGACACGGTCGTGAGGGTTTGCACACACCCCC‑AAAAAAAAAGCAGCTCCCGAGAgctgcaattt < 2:1170821/150‑6 (MQ=255) cGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑tttttt < 2:2681466/150‑1 (MQ=255) gCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTc < 2:3786466/150‑1 (MQ=255) gCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTc < 1:6968357/150‑1 (MQ=255) cACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCTCGGGAGCTGC‑tttttttt < 2:8432361/150‑3 (MQ=255) cACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCt < 2:1364595/150‑1 (MQ=255) cTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTa < 2:4139480/150‑1 (MQ=255) tGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTAc > 1:4394801/1‑150 (MQ=255) gAAGGGATCACCGCTCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑Tttttttttggg < 1:5897371/150‑4 (MQ=255) gAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACt > 2:4548766/1‑150 (MQ=255) gAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACt < 2:8059335/150‑1 (MQ=255) aaGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTc > 2:2237631/1‑150 (MQ=255) aaGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTc > 1:1058872/1‑150 (MQ=255) ggATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTccc > 2:4411509/1‑150 (MQ=255) ggATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTcccc > 1:6801577/1‑150 (MQ=255) gATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTa < 2:3510306/143‑1 (MQ=255) gATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCAGC‑TTTTTTCTTACAccccc > 2:2976394/1‑150 (MQ=255) ccGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCttttt < 1:5504938/150‑1 (MQ=255) ccGATCCGGAGGTAGCATCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGCCGGTCGTGAGGGTGTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCttttt < 2:6402401/150‑1 (MQ=255) cGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTtg > 2:1285796/1‑150 (MQ=255) tCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGc > 1:422507/1‑150 (MQ=255) cGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCtt < 2:8245481/150‑1 (MQ=255) gAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTtgt < 2:1886517/150‑1 (MQ=255) ggTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTgg < 2:495486/150‑1 (MQ=255) gTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTggg > 1:294360/1‑150 (MQ=255) aGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGt > 2:3103943/1‑150 (MQ=255) ttCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCATCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTAATCCCCCTTTTTGTGCTTGTGGGGTTTc > 1:5158583/1‑150 (MQ=255) ttCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTc > 2:519211/1‑150 (MQ=255) tCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTGGTGGGGTTTCa > 2:6046935/1‑150 (MQ=255) aGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAgg > 1:3566007/1‑150 (MQ=255) aTCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTcc < 2:7290237/150‑1 (MQ=255) cATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGa < 1:6841684/150‑1 (MQ=255) tCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCtt < 1:7033175/130‑1 (MQ=255) aagcGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACACCCCCTTTGTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTc > 1:1843140/1‑150 (MQ=255) gcGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTg < 1:1912168/150‑1 (MQ=255) ggAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCt > 2:3183476/1‑150 (MQ=255) aaGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCttt > 1:2242052/1‑150 (MQ=255) cTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAg < 2:7025348/150‑1 (MQ=255) cTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGT‑AGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAgg > 2:8195058/1‑150 (MQ=255) tCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAgg > 1:2396319/1‑150 (MQ=255) tCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAgg > 1:7359454/1‑150 (MQ=255) tCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTGTCAgg > 2:5789008/1‑150 (MQ=255) tCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTGTTTGTGCTTGGGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAgg > 1:7468575/1‑150 (MQ=255) cACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAggg < 1:6044454/150‑1 (MQ=255) acgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAgggg > 1:1294757/1‑150 (MQ=255) cgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGt > 1:6224431/1‑150 (MQ=255) gTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑‑AAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCt < 2:1409399/150‑1 (MQ=255) cttGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AACAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCt < 2:1323271/149‑1 (MQ=255) gATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCtttt < 2:2376790/150‑1 (MQ=255) tCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGt > 1:339588/1‑150 (MQ=255) cGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGTTTTTCAGGGGTGACTCGCTGCCTTTTGTCCgg < 2:5560946/150‑1 (MQ=255) cGAGACGGTCGTGAGGGGTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCGTTGTGTGCGTGGGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCgg > 2:5236834/1‑150 (MQ=255) gagcCGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGa < 1:4913443/150‑1 (MQ=255) agaCGGTCGTGAGGGTTTGCAAACAGCCCCAAAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTAATCCCCCTTTTTTTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTAGCTGCCTTTTGTCCGGa > 1:8174581/1‑150 (MQ=255) cGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATc < 1:5969701/150‑1 (MQ=255) tGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCtt > 2:7380108/1‑150 (MQ=255) gAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTc > 1:530907/1‑150 (MQ=255) gggTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCAt > 1:2730355/1‑150 (MQ=255) gggTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCAt > 1:78079/1‑150 (MQ=255) ggTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCAtt > 1:3214319/1‑150 (MQ=255) ggTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCAtt < 2:2517894/150‑1 (MQ=255) ttGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGt < 1:2071264/150‑1 (MQ=255) ttGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGt < 2:323/150‑1 (MQ=255) cacacaGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTg > 2:4713869/1‑145 (MQ=255) cacacaGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTg < 1:4713869/145‑1 (MQ=255) cccccca‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCttt < 2:3414475/147‑1 (MQ=255) caGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCttt < 1:3908664/150‑1 (MQ=255) gCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTTCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTgg < 2:2573043/150‑1 (MQ=255) ccc‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTGTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGGCCGGAGTGCCCTCTTCCTTGGTGCGCTTTGGGc > 2:3647399/1‑150 (MQ=255) gtaagaaaaaaGCAGCTCTCGGGAGCTGC‑TTTTTTTTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGcc > 2:6625307/6‑150 (MQ=255) c‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCt < 1:1640866/150‑1 (MQ=255) c‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCt > 1:4272063/1‑150 (MQ=255) c‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCt > 2:5107794/1‑150 (MQ=255) aaaaaaaaaGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCGTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTg > 1:5457847/1‑150 (MQ=255) aaaaaaaaGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTgg < 1:5626360/150‑1 (MQ=255) gaaaaaaGCAGCTCTCGGGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCCTCTTCATTGGTGCGCTTTGGGCCTGGc > 2:1631370/2‑150 (MQ=255) gaaaaaaGCAGCTCTCGGGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACCCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGc > 1:3258630/2‑150 (MQ=255) aaaaaaGCAGCTCTCGGGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCt > 2:4360985/1‑150 (MQ=255) aaaaaaGCAGCTCTCGGGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCt < 1:8475481/150‑1 (MQ=255) aaaaGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTg < 2:3983597/150‑1 (MQ=255) agcagcTCTCGGGAGCTGCTTTTTTTTTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGAt > 2:7694537/1‑150 (MQ=255) gcagcTCTCGGGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGAttg > 1:2886813/1‑148 (MQ=255) gcagcTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGc > 2:7474488/1‑150 (MQ=255) agcTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTc > 1:4122977/1‑150 (MQ=255) agcTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTc < 1:4569177/150‑1 (MQ=255) tCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCATg < 1:3667576/150‑1 (MQ=255) agagCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCATGCaaaa < 1:1671049/150‑1 (MQ=255) | CAGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAAAAAAGCAGCTCCCGAGAGCTGC‑TTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCATGCAAAA > NC_002947/27435‑27733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |