BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,597,599	A→C	13.7%	E68A (GAG→GCG)	PP_1397 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,597,599	0	A	C	13.7%	358.2 / 2.4	156	E68A (GAG→GCG)	PP_1397	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (110/15); new base C (6/16); total (116/40)
Fisher's exact test for biased strand distribution p-value = 1.15e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 173 total aligned reads displayed.

TCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGATCGGCTCGGCG  >  NC_002947/1597450‑1597748

tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCATGGGCGCCGTGGCCGCcgacga                                                                                                                                                       >  2:4985459/1‑150 (MQ=255)

tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGGCGCcgacga                                                                                                                                                       >  1:2985598/1‑150 (MQ=255)

tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgacga                                                                                                                                                       >  2:6472475/1‑150 (MQ=255)

tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgacga                                                                                                                                                       >  2:6234931/1‑150 (MQ=255)

tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgacga                                                                                                                                                       >  2:4343797/1‑150 (MQ=255)

tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgacga                                                                                                                                                       >  2:5869625/1‑150 (MQ=255)

tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgacga                                                                                                                                                       >  2:2167667/1‑150 (MQ=255)

tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgacga                                                                                                                                                       >  1:3752836/1‑150 (MQ=255)

tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCcgacga                                                                                                                                                       >  2:2989217/1‑150 (MQ=255)

tCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCCCccacga                                                                                                                                                       >  1:3724572/1‑150 (MQ=255)

 cATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGATGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAg                                                                                                                                                      <  2:8472477/150‑1 (MQ=255)

 cATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAg                                                                                                                                                      <  2:417243/150‑1 (MQ=255)

 cATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAg                                                                                                                                                      <  1:5311072/150‑1 (MQ=255)

 cATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAg                                                                                                                                                      <  2:2540163/150‑1 (MQ=255)

 cATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAg                                                                                                                                                      >  2:3824244/1‑150 (MQ=255)

    ttCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAggcg                                                                                                                                                   <  1:7848361/150‑1 (MQ=255)

    ttCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAggcg                                                                                                                                                   >  1:3454953/1‑150 (MQ=255)

      cGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAggcggc                                                                                                                                                 <  1:3266066/150‑1 (MQ=255)

       gAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGcc                                                                                                                                                >  1:1024587/1‑150 (MQ=255)

       gAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGcc                                                                                                                                                >  1:7231377/1‑150 (MQ=255)

       gAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGcc                                                                                                                                                >  1:6259735/1‑150 (MQ=255)

       gAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGcc                                                                                                                                                >  1:6259291/1‑150 (MQ=255)

         aGCGGGATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCACAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGGTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCAc                                                                                                                                              <  1:1762317/150‑1 (MQ=255)

              tATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCAccgccg                                                                                                                                         >  2:1396845/1‑150 (MQ=255)

                tCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAg                                                                                                                                       >  2:3733498/1‑150 (MQ=255)

                tCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAg                                                                                                                                       >  2:4695662/1‑150 (MQ=255)

                  ggCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCCTCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCCCCGCCGCGCt                                                                                                                                     >  2:8528038/1‑150 (MQ=255)

                  ggCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCt                                                                                                                                     >  2:8001979/1‑150 (MQ=255)

                  ggCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCt                                                                                                                                     >  2:2679381/1‑150 (MQ=255)

                  ggCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCt                                                                                                                                     >  1:8553045/1‑150 (MQ=255)

                   gCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTg                                                                                                                                    >  2:7496262/1‑150 (MQ=255)

                   gCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCCCCGAGCTg                                                                                                                                    >  2:3906231/1‑150 (MQ=255)

                          tGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGcc                                                                                                                             >  2:3765273/1‑150 (MQ=255)

                              ggTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCAGCa                                                                                                                         >  1:5714192/1‑150 (MQ=255)

                               gTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAg                                                                                                                        >  1:8596039/1‑150 (MQ=255)

                               gTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCCCCCACGAGGCGGCCCCCCCCCACCAGCAACCCcagcag                                                                                                                        >  1:8432395/1‑150 (MQ=255)

                                tGGATGGGGGGGGCTACCCCGCGCCCTTGGGGTTCAACCCCTTGGGCTGGGGGGGCGCGCGGCGCTTTCAACTGGTCCGCGCCGGGCCGGTGTACCCGGGCGCGGGGCCCGCCGCCGCGGGGGCCACTGCCGAGCTGCAACGCCTGCAgg                                                                                                                       <  2:2203192/150‑1 (MQ=255)

                                tGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCCCCCAGCTGCAACGCCTGCAgg                                                                                                                       >  1:7877403/1‑150 (MQ=255)

                                  gAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGc                                                                                                                     >  2:3206220/1‑150 (MQ=255)

                                  gAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGAGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGc                                                                                                                     >  2:1372729/1‑150 (MQ=255)

                                        ggcggcTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGc                                                                                                               >  2:724299/1‑150 (MQ=255)

                                              tATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGACCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAagag                                                                                                         >  1:3923598/1‑150 (MQ=255)

                                                  aCGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGGAGTGGGTg                                                                                                     >  1:4946048/1‑150 (MQ=255)

                                                  aCGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTg                                                                                                     >  2:614103/1‑150 (MQ=255)

                                                  aCGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCCCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTg                                                                                                     >  2:3319818/1‑150 (MQ=255)

                                                   cgcgGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGa                                                                                                    >  1:7526127/1‑150 (MQ=255)

                                                       gCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCCCCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGctg                                                                                                >  1:4183081/1‑150 (MQ=255)

                                                          aTCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGctggtc                                                                                             >  2:1259027/1‑150 (MQ=255)

                                                          aTCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCCACCAGGCGGCCAACCCCGAGCAGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGctggtc                                                                                             >  2:3035570/1‑150 (MQ=255)

                                                                 tCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCCCCGAGGCGGCCACCCCCCAGCGGCAACCCCAGCACGGCGGCAGCGAAGAGGGTGGGCGGGGCGGGTGAt                                                                                      >  1:3118799/1‑150 (MQ=255)

                                                                        cTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCcg                                                                               >  2:5770681/1‑150 (MQ=255)

                                                                        cTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCcg                                                                               >  1:8012950/1‑150 (MQ=255)

                                                                        cTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACCAGGCGGCCACCCCCCAGCTGCAAAGCCAGCCGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGTTAAGGCcg                                                                               >  1:443843/1‑150 (MQ=255)

                                                                        cTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCCACGAGGCGGCCACCGCCGAGCTGCAACCCCAGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATAAGGCcg                                                                               >  1:2707728/1‑150 (MQ=255)

                                                                         ttGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCcgg                                                                              >  2:7776391/1‑150 (MQ=255)

                                                                           gggCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCCCCGACGAGGCGGCCACCCCCCAGCAGCAACGCCAGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATAAGGCcggcg                                                                            >  1:5586468/1‑150 (MQ=255)

                                                                            ggCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCcggcgg                                                                           >  1:1315692/1‑150 (MQ=255)

                                                                              ctgggggggggCGCCGCGCTTACACTTGGTTCTCGAGGGGCTGGTGTTCACGGGCGCGGTGGCCGCCTCGGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGcc                                                                         <  2:7231377/147‑1 (MQ=255)

                                                                               aTGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCCCCGACCAGGCGGCCACCCCCGAGCTGCAAACCCAGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCg                                                                        >  1:2749408/1‑150 (MQ=255)

                                                                                ggggCGGCGCCCCGCGTTTTCCCTCGTTGCCCGAGGGGCTGTGGTTCCTGGGGCCCGTGCCCGCGCTCGTGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCgg                                                                       <  2:4909436/149‑1 (MQ=255)

                                                                                  ggcggcGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGc                                                                     >  2:817837/1‑150 (MQ=255)

                                                                                     ggcgCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGCCGAGGCGGCCACCGCCGAGCTGCAACGCCTGCCGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCAt                                                                  >  2:8124386/1‑150 (MQ=255)

                                                                                     ggcgCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCCCCGAGCTGCAAAGCCGGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATAAGGCCGGCGGCCGGGCCaa                                                                  >  1:1919094/1‑149 (MQ=255)

                                                                                      gcgcgcCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATc                                                                 >  2:5183964/1‑150 (MQ=255)

                                                                                       ggcgcggcgcTTTCACATGGTTCTCGCGGGGCTGGTGTCCACGGGCGCCGGGGCCGCCGCGGCGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCt                                                                <  2:8639372/149‑1 (MQ=255)

                                                                                        gcgccgcgcTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCtt                                                               >  1:5008385/1‑150 (MQ=255)

                                                                                             gcgcTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAAAGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCATGAACa                                                          >  2:4619269/1‑150 (MQ=255)

                                                                                             gcgcTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCCCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCAGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACa                                                          >  2:1166128/1‑150 (MQ=255)

                                                                                             gcgcTTACACATGGTTCTCGCGGGGCTGGTTTTCACGGGCGCGGGGGCCCCCGCCGCGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACa                                                          <  2:7942767/150‑1 (MQ=255)

                                                                                                cTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCAGCAACGCCGGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGt                                                       >  2:2304880/1‑150 (MQ=255)

                                                                                                     cctgggTCCTCGGGGGGCTGGTGTTCAGGGGCGCGGGGGCGGCGGCGGGGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGccc                                                  <  2:5539725/146‑1 (MQ=255)

                                                                                                     acaAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGGCGCCCACCAGGCGGCCACCCCCCCGCGGCAAACCCAGCAGGGCGTCAGCGCACAGGGTGAGCTGGTGTGGTGATAAGGCCGGCGGCCGGGCCCACTTGAACAGGTTTccc                                                  >  1:6629776/1‑150 (MQ=255)

                                                                                                     acaAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGCGGCGGCCACCCCCGAGCGGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGGTGccc                                                  >  2:5438457/1‑150 (MQ=255)

                                                                                                     acaAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGccc                                                  >  2:4773975/1‑150 (MQ=255)

                                                                                                     acaAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCCACGAGGCGGCCCCCCCCCCGCTGCAACCCCTGCCGGGCGTCCGCGAACAGGGGGAGCTGGGCTGGGGATCAGGCCGGCGGCCCGGCCCTCGTGAACAGGTTGccc                                                  >  1:2012382/1‑150 (MQ=255)

                                                                                                      cacggTTCCCGCGGGGCTGTTGTTCTGGGGCGCCGGGGCCGCCGAGGCGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCa                                                 <  1:8725509/147‑1 (MQ=255)

                                                                                                       aaGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATAAGGCCGGCGGCCGGGCCATCTTTAACAGGTTGCCCAg                                                >  2:3958036/1‑150 (MQ=255)

                                                                                                       aaGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATAAGGCCGGCGGCCGGGCCATCTTGAAAAGGTTTCCCAg                                                >  2:1479035/1‑150 (MQ=255)

                                                                                                            ccccgccGGGCGGTTGTTCCCGGGCGCGGGGGCCCCGGCCGCGGGGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGa                                           <  2:4263770/144‑1 (MQ=255)

                                                                                                             ctcGACGGGCAGGTGTTCAAGGGCGCCGTGGCCCCCGACGAGGCGGCCAACGCCGAGCTGCAAAGCCAGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTATGGTGAACAAGCCGGCGGCCGGGCCATCTTTAACAGCATTCCCAACGCGaa                                          >  1:5125369/1‑150 (MQ=255)

                                                                                                              tcgcggggCCGGTGTTCCGGGGGGCCGGGCCCGCCGCGGCGGGGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGaaa                                         <  2:2816559/145‑1 (MQ=255)

                                                                                                               cGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAaat                                        >  2:7843906/1‑150 (MQ=255)

                                                                                                                 aCGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGGCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAaataa                                      >  1:5045524/1‑150 (MQ=255)

                                                                                                                 aCGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCCACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCAACTTGAACAGGTTGCCCAGCTCGAaataa                                      >  1:5044262/1‑150 (MQ=255)

                                                                                                                         gtgtTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATACGCCgg                              >  2:1962325/1‑150 (MQ=255)

                                                                                                                              cAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGTTCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCAc                         >  2:6984148/1‑150 (MQ=255)

                                                                                                                               aaGGGCGCCGTGGCCGCCGACGCGGCGGCCACCGCCGAGCTGCAACGCCTGCCGGGCGTCCGCGAAGCGGGTGAGCGGGTCGGGTGCTCCGGCCGGCGGCCGGGCCCTCGTGAACAGGGTGCCCAGCTCGCAATAATCCGCCGGGCCAcc                        >  2:7958005/1‑150 (MQ=255)

                                                                                                                                      ggggggCCGCCGCCGCGGCGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGc                 <  2:3454953/146‑1 (MQ=255)

                                                                                                                                         gcgccgccCCCGGGGCCCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAgg              <  1:7500452/148‑1 (MQ=255)

                                                                                                                                          ggCCGCCGCCGTGGCGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGa             <  2:4353882/150‑1 (MQ=255)

                                                                                                                                          ggCCGCCGACGGGGGGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGa             <  2:6427173/150‑1 (MQ=255)

                                                                                                                                           gccgccGACGCGGCGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAt            <  2:8596184/150‑1 (MQ=255)

                                                                                                                                            ccgccgccgTGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtc           <  1:5869625/150‑1 (MQ=255)

                                                                                                                                            ccgccgCGGGGGCGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtc           <  2:7116594/150‑1 (MQ=255)

                                                                                                                                             cgccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcg          >  1:829874/1‑150 (MQ=255)

                                                                                                                                             cgccgACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcg          >  2:1226964/1‑150 (MQ=255)

                                                                                                                                              gccgccGCGGGGCCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcgg         <  1:7997238/150‑1 (MQ=255)

                                                                                                                                               ccgccgCGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcggc        <  2:7877403/150‑1 (MQ=255)

                                                                                                                                                cgacgaGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcggcg       >  2:5748710/1‑149 (MQ=255)

                                                                                                                                                  acgaGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGAtcggctcg     >  2:180169/1‑150 (MQ=255)

TCATTTCGAAGCGGTATCGGCGATGGTGCCGGTGGAAGGTGGCGGCTATCACGCGGCCATCGCGGTCAAAGCCTTGGGCATGGGCGGCGCGCCGCGCTTTCACAAGGTTCTCGACGGGCAGGTGTTCAAGGGCGCCGTGGCCGCCGACGAGGCGGCCACCGCCGAGCTGCAACGCCTGCAGGGCGTCAGCGAAGAGGGTGAGCTGGTCTGGTGATCAGGCCGGCGGCCGGGCCATCTTGAACAGGTTGCCCAGCTCGAAATAATCCGCCGGGCCACCCCCACGCAGGATCGGCTCGGCG  >  NC_002947/1597450‑1597748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`