| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,733,648 | C→T | 6.4% | intergenic (+51/+72) | cspA‑I → / ← PP_1523 | major cold shock protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,733,648 | 0 | C | T | 6.4% | 975.1 / 35.8 | 312 | intergenic (+51/+72) | cspA‑I/PP_1523 | major cold shock protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (136/156); new base T (4/16); total (140/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.13e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 329 total aligned reads displayed.
GGTGAGGGGCATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCG > NC_002947/1733499‑1733795 | tGAGGGGCATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACgg < 1:1343604/150‑1 (MQ=255) gAGGGGCATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGt < 1:8426466/150‑1 (MQ=255) gAGGGGCATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGt < 2:1570451/150‑1 (MQ=255) gggCATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGc > 2:1415704/1‑150 (MQ=255) ggCATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCt < 1:5705789/150‑1 (MQ=255) gCATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCGTGGTGGCTg < 1:2511160/150‑1 (MQ=255) gCATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCGTGGTGGCTg < 2:4518122/150‑1 (MQ=255) cATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCGTGGTGGCTGc < 2:1299074/150‑1 (MQ=255) cATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCGTGGTGGCTGc < 1:5003624/150‑1 (MQ=255) cATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGc < 2:3429324/150‑1 (MQ=255) tCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCGTGGTGGCTGctt < 1:1358954/150‑3 (MQ=255) gTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACg > 2:3588734/1‑150 (MQ=255) tACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACgg < 1:5673116/150‑1 (MQ=255) ccTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCa < 1:7816696/150‑1 (MQ=255) tGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATa < 2:1430522/150‑1 (MQ=255) cGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGccc < 1:1003180/150‑1 (MQ=255) cGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGccc < 2:5268729/150‑1 (MQ=255) cGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGccc < 1:4777212/150‑1 (MQ=255) gAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCg > 2:7654230/1‑150 (MQ=255) aaGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGt > 1:6797928/1‑150 (MQ=255) gggCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTAt > 1:4257031/1‑150 (MQ=255) gCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTcgcg < 2:3111696/150‑1 (MQ=255) cGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCgg < 1:2808941/150‑1 (MQ=255) gTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTa > 1:5273647/1‑150 (MQ=255) gTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAAccc < 2:6864679/150‑1 (MQ=255) aCGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCAt < 1:5551805/150‑1 (MQ=255) cGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCAtt < 2:1786051/150‑1 (MQ=255) cGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCAtt > 1:6398582/1‑150 (MQ=255) gCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATCGCCCGTATTCGCGGGTCAACCCATTc > 2:4223009/1‑150 (MQ=255) gCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTc > 2:222938/1‑150 (MQ=255) gCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTc > 2:5018520/1‑150 (MQ=255) tGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTa < 1:290281/150‑1 (MQ=255) cGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACa < 2:8485272/150‑1 (MQ=255) cGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACa < 1:231266/150‑1 (MQ=255) ggCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGa < 2:45335/150‑1 (MQ=255) ccAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGc > 2:7925196/1‑150 (MQ=255) aGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCt > 1:636814/1‑150 (MQ=255) aGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCt > 1:1609414/1‑150 (MQ=255) aGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCGTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATACGCGGGTAAACCCATTCCTACAGACACGAGCAAGCCt < 2:6537402/150‑1 (MQ=255) gCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGc < 1:513224/150‑1 (MQ=255) cTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCaa > 2:5780805/1‑142 (MQ=255) cTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCg > 1:3955047/1‑150 (MQ=255) gCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGtt > 2:3952392/1‑150 (MQ=255) cAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGttt < 2:2535236/150‑1 (MQ=255) aaGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTc > 2:1056097/1‑150 (MQ=255) gCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCat < 1:4573056/150‑1 (MQ=255) gCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGCGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCat < 1:4945110/150‑1 (MQ=255) cGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCatga < 1:346108/150‑1 (MQ=255) cGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCatga > 2:7173677/1‑150 (MQ=255) cGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCatga > 2:5980214/1‑150 (MQ=255) aaGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCatgatg < 1:6167167/150‑1 (MQ=255) aaGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCatgatg > 1:4071328/1‑150 (MQ=255) tGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTCAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAgg > 1:3256283/1‑150 (MQ=255) tGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAgg > 1:5887410/1‑150 (MQ=255) gggCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGt < 1:1258374/150‑1 (MQ=255) ggCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTg > 1:5972708/1‑150 (MQ=255) gCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGa > 2:7584549/1‑150 (MQ=255) gAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCct < 1:8645506/150‑1 (MQ=255) aGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCatc < 2:1891952/150‑1 (MQ=255) gCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCctct < 1:6554761/150‑1 (MQ=255) ctctGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTc < 2:4323578/150‑1 (MQ=255) tctGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCa > 1:2113185/1‑150 (MQ=255) tctGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCa < 2:7728106/150‑1 (MQ=255) ctGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCAc > 2:2438061/1‑150 (MQ=255) ctGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCAc > 2:2577839/1‑150 (MQ=255) tGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCAcc > 2:6476860/1‑150 (MQ=255) tttCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTc > 1:3989247/1‑150 (MQ=255) ttCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCg > 1:7368932/1‑150 (MQ=255) aaGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGgcg > 1:1864735/1‑150 (MQ=255) ccGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTg > 1:1931930/1‑150 (MQ=255) ggAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCg < 1:7510444/150‑1 (MQ=255) ggAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCg < 2:4066957/150‑1 (MQ=255) gAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCgg > 1:154355/1‑150 (MQ=255) aGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGa < 1:7030257/150‑1 (MQ=255) aGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGa < 1:3791095/150‑1 (MQ=255) aGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGa < 1:7030397/150‑1 (MQ=255) gCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGAc > 2:3132738/1‑150 (MQ=255) gCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGAc > 2:2835280/1‑150 (MQ=255) gCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGAc < 2:5573070/150‑1 (MQ=255) ggCTTGCCCGCGAAGCAGCCACCGCGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCa > 1:6220583/1‑150 (MQ=255) gCTTGCCCGCGAAGCCGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCTCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAg < 2:5642375/150‑1 (MQ=255) gCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCaa < 2:6358481/150‑2 (MQ=255) ttGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCg < 2:8750761/150‑1 (MQ=255) ttGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCg < 2:8150286/150‑1 (MQ=255) ttGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCg < 1:3588734/150‑1 (MQ=255) gCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGt < 1:834074/150‑1 (MQ=255) cccGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTc < 2:5849137/150‑1 (MQ=255) cccGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTc > 1:971102/1‑150 (MQ=255) ccGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCa > 2:5692233/1‑150 (MQ=255) cgcgAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAAc > 2:6005162/1‑72 (MQ=255) cgcgAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCACGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCAGATGCGGACCCAGCGGTCAg > 1:8760739/1‑150 (MQ=255) cgcgAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAg > 1:7601350/1‑150 (MQ=255) ccgtggcagcCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGc > 2:4446504/6‑150 (MQ=255) tggcagcCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCAtc > 2:7345866/3‑150 (MQ=255) cagcCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCAtcttc < 1:1415704/150‑1 (MQ=255) caccacGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTcc > 2:6180465/1‑150 (MQ=255) caccacGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTcc > 2:3210670/1‑150 (MQ=255) caccacGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTcc < 1:4362744/150‑1 (MQ=255) accacGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTccc < 1:7952363/150‑1 (MQ=255) cacGGGGGCTGCCACGGGCATAGCCCGTCTTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCGTGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCAGCTTCTTCCCCg > 2:4883518/1‑150 (MQ=255) | GGTGAGGGGCATCGTACCCTGGTCGAAGGGCAGCGGGTGGAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGCCACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCG > NC_002947/1733499‑1733795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |