Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,921,376 G→C 5.7% intergenic (+87/‑28) PP_1715 → / → PP_1716 hypothetical protein/Cro/CI family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,921,3760GC 5.7% 1236.2 / 44.2 365intergenic (+87/‑28)PP_1715/PP_1716hypothetical protein/Cro/CI family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base G (174/169);  new base C (11/10);  total (185/180)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 371 total aligned reads displayed.

CTGCGCGTGGTCGAGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGTTTCCAGTGAGGC  >  NC_002947/1921227‑1921525
                                                                                                                                                     |                                                                                                                                                     
cTGCGCGTGGTCGAGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATg                                                                                                                                                       <  1:4578747/150‑1 (MQ=255)
cTGCGCGTGGTCGAGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATg                                                                                                                                                       <  1:7441610/150‑1 (MQ=255)
cTGCGCGTGGTCGAGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATg                                                                                                                                                       <  2:1816570/150‑1 (MQ=255)
         gTCGAGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATcc                                                                                                                                              <  2:8027445/150‑1 (MQ=255)
         gTCGAGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACAGCATGTAATcc                                                                                                                                              <  2:1658483/150‑1 (MQ=255)
            gAGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCttt                                                                                                                                           <  2:656459/150‑1 (MQ=255)
            gAGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCttt                                                                                                                                           >  1:6053130/1‑150 (MQ=255)
            gAGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCttt                                                                                                                                           >  2:7164371/1‑150 (MQ=255)
             aGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCtttt                                                                                                                                          <  1:291422/150‑1 (MQ=255)
             aGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCtttt                                                                                                                                          <  2:1469922/150‑1 (MQ=255)
             aGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCtttt                                                                                                                                          <  1:7072034/150‑1 (MQ=255)
             aGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCtttt                                                                                                                                          <  2:4191398/150‑1 (MQ=255)
             aGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACAGCATGTAATccgtag                                                                                                                                          <  1:1720652/150‑5 (MQ=255)
                gcCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGCCCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTaa                                                                                                                                       >  2:2364908/1‑150 (MQ=255)
                 ccTGCCGGCTACCCCGGAAGCGCTGCGGCTGGCGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTCATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTaaa                                                                                                                                      >  2:4443513/1‑150 (MQ=255)
                 ccTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTaaa                                                                                                                                      <  2:6938908/150‑1 (MQ=255)
                 ccTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTaaa                                                                                                                                      <  2:3055116/150‑1 (MQ=255)
                  cTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAg                                                                                                                                     >  1:679025/1‑150 (MQ=255)
                    gCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAggg                                                                                                                                   <  2:1062788/150‑1 (MQ=255)
                    gCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAggg                                                                                                                                   <  1:8218403/150‑1 (MQ=255)
                         cTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTg                                                                                                                              <  2:7867900/150‑1 (MQ=255)
                           aCCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTa                                                                                                                            >  1:6970419/1‑150 (MQ=255)
                             cccGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAAt                                                                                                                          >  1:7975211/1‑150 (MQ=255)
                             cccGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAAt                                                                                                                          >  2:8656927/1‑150 (MQ=255)
                             cccGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAAt                                                                                                                          >  2:834697/1‑150 (MQ=255)
                              ccGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATg                                                                                                                         <  1:4684746/150‑1 (MQ=255)
                                  aaGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATTCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTa                                                                                                                     <  1:5824585/150‑1 (MQ=255)
                                       cTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTctg                                                                                                                <  1:152794/150‑3 (MQ=255)
                                       cTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAg                                                                                                                <  1:5498710/150‑1 (MQ=255)
                                       cTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAg                                                                                                                <  1:8585774/150‑1 (MQ=255)
                                       cTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAg                                                                                                                <  1:8718623/150‑1 (MQ=255)
                                        tGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAgg                                                                                                               >  1:5199951/1‑150 (MQ=255)
                                            gCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGtcat                                                                                                           >  2:558630/1‑150 (MQ=255)
                                             cTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGtcatc                                                                                                          >  2:7548395/1‑150 (MQ=255)
                                              tGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGtcatca                                                                                                         >  2:7677294/1‑150 (MQ=255)
                                                     caacaaGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGa                                                                                                  <  2:2644810/150‑1 (MQ=255)
                                                      aacaaGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGAc                                                                                                 <  2:5377363/150‑1 (MQ=255)
                                                         aaGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGt                                                                                              >  1:4836675/1‑150 (MQ=255)
                                                         aaGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGt                                                                                              <  2:497619/150‑1 (MQ=255)
                                                             aaTGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAAc                                                                                          <  1:53805/150‑1 (MQ=255)
                                                              aTGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAAcc                                                                                         >  2:299568/1‑150 (MQ=255)
                                                              aTGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAAcc                                                                                         >  2:6796627/1‑150 (MQ=255)
                                                                gAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCg                                                                                       >  1:1979794/1‑150 (MQ=255)
                                                                gAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCg                                                                                       >  2:6129835/1‑150 (MQ=255)
                                                                 aaaCCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGa                                                                                      <  1:246174/150‑1 (MQ=255)
                                                                 aaaCCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGa                                                                                      <  2:4673846/150‑1 (MQ=255)
                                                                   aCCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCgg                                                                                                    >  1:8353039/1‑134 (MQ=255)
                                                                     cGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTAc                                                                                  >  1:2061198/1‑150 (MQ=255)
                                                                         cTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCg                                                                              <  1:3865064/150‑1 (MQ=255)
                                                                         cTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCg                                                                              <  2:3941521/150‑1 (MQ=255)
                                                                          tGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGt                                                                             >  2:3715369/1‑150 (MQ=255)
                                                                          tGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGt                                                                             >  2:2301904/1‑150 (MQ=255)
                                                                           gAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTa                                                                            <  1:3654749/150‑1 (MQ=255)
                                                                              tctcACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGtt                                                                         >  1:6574063/1‑150 (MQ=255)
                                                                              tctcACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGtt                                                                         >  2:8453202/1‑150 (MQ=255)
                                                                                tcACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTcc                                                                       >  1:4955890/1‑150 (MQ=255)
                                                                                 cACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTccc                                                                      >  1:6660593/1‑150 (MQ=255)
                                                                                  aCCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCt                                                                     <  1:3372548/150‑1 (MQ=255)
                                                                                   ccTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTg                                                                    >  2:4322718/1‑150 (MQ=255)
                                                                                    cTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTgg                                                                   >  1:6488228/1‑150 (MQ=255)
                                                                                    cTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTgg                                                                   <  2:3279589/150‑1 (MQ=255)
                                                                                     tCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTggg                                                                  >  1:4329448/1‑150 (MQ=255)
                                                                                       aaCTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAg                                                                <  1:1056597/150‑1 (MQ=255)
                                                                                        aCTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGc                                                               >  2:6311161/1‑150 (MQ=255)
                                                                                             acaGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTCCGCCGTAGTTCCCTGGGAGCACTAc                                                          >  2:6556061/1‑150 (MQ=255)
                                                                                                gACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAg                                                       >  1:7495127/1‑150 (MQ=255)
                                                                                                 aCCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAgg                                                      <  1:4270838/150‑1 (MQ=255)
                                                                                                 aCCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAgg                                                      >  1:2738151/1‑150 (MQ=255)
                                                                                                  ccTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGc                                                     <  2:600374/150‑1 (MQ=255)
                                                                                                   cTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCg                                                    >  2:7388087/1‑150 (MQ=255)
                                                                                                     cGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGtt                                                  <  1:3127827/150‑1 (MQ=255)
                                                                                                     cGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGtt                                                  <  2:3132881/150‑1 (MQ=255)
                                                                                                          ttGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCa                                             <  2:4812945/150‑1 (MQ=255)
                                                                                                            ggTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAgc                                           >  2:2236222/1‑150 (MQ=255)
                                                                                                            ggTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAACGCCTGGTATTGCTccca                                           <  2:4568886/150‑4 (MQ=255)
                                                                                                              tAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAgcgc                                         >  1:6044564/1‑150 (MQ=255)
                                                                                                                  ataATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTgca                                     <  2:8304556/150‑1 (MQ=255)
                                                                                                                     aTTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTgcaggg                                  >  1:8512283/1‑150 (MQ=255)
                                                                                                                           aTAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGggcaggca                            >  1:6207499/1‑150 (MQ=255)
                                                                                                                            tAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCAc                           >  1:1359247/1‑150 (MQ=255)
                                                                                                                             aaGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTCTTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCAcc                          >  2:6347346/1‑150 (MQ=255)
                                                                                                                             aaGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCAcc                          >  1:7352708/1‑150 (MQ=255)
                                                                                                                                   tATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGa                    <  1:5913210/150‑1 (MQ=255)
                                                                                                                                       ccTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCg                >  2:2073122/1‑150 (MQ=255)
                                                                                                                                         tACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGt              <  2:1189745/150‑1 (MQ=255)
                                                                                                                                         tACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGt              >  2:2490024/1‑150 (MQ=255)
                                                                                                                                         aaaggATTACAGCATGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTg                                                                    <  1:1219573/93‑1 (MQ=255)
                                                                                                                                         aaaggATTACAGCATGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCACTACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGt              >  2:5088211/4‑150 (MQ=255)
                                                                                                                                         aaaggATTACAGCATGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGt              >  2:587665/4‑150 (MQ=255)
                                                                                                                                           aggATTACAGCATGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGttt            >  1:4018342/2‑150 (MQ=255)
                                                                                                                                            ggATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAAGGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGTTTc           <  1:8656927/150‑1 (MQ=255)
                                                                                                                                              aTTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGTTTCCa         <  2:3688982/150‑1 (MQ=255)
                                                                                                                                                tACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGTTTCCAGt       <  2:40132/150‑1 (MQ=255)
                                                                                                                                                tACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCACTGCAGGGCAGGCACCAGCCGAGGCGGTTTCCAGt       >  1:3690904/1‑150 (MQ=255)
                                                                                                                                                 aCATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGTTTCCAGTg      <  2:3844359/150‑1 (MQ=255)
                                                                                                                                                  cATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGTTTCCAGTGa     <  2:2833930/150‑1 (MQ=255)
                                                                                                                                                  cATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGTTTCCAGTGa     >  1:8086526/1‑150 (MQ=255)
                                                                                                                                                  cATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGTTTCCAGTGa     <  1:63441/150‑1 (MQ=255)
                                                                                                                                                  cATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGTTTCCAGTGa     <  1:225538/150‑1 (MQ=255)
                                                                                                                                                    tGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGTTTCCAGTGAgg   >  2:5731861/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTGCGCGTGGTCGAGCGCCTGCCGGCTACCCCGGAAGCGCTGCGGCTGGAGCGCAACAAGTAATGAAACCGGCCTGAATCTCACCTCAACTGCACAGACCTCGGAGTTGGTAATATAATTGGCATAAGGGTTATGCCTACGGATTACATGCTGTAATCCTTTTTAAAGGGGTTTGTAATGGGTATTCAGGTCATCAGCCGGGACGGTCAACCCGAGTACGCCGTAGTTCCCTGGGAGCAATACCAGGCGTTGCTCAGCGCTGCAGGGCAGGCACCAGCCGAGGCGGTTTCCAGTGAGGC  >  NC_002947/1921227‑1921525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: