| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,952,787 | C→G | 9.5% | intergenic (‑56/+114) | PP_1748 ← / ← PP_1749 | hypothetical protein/acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,952,787 | 0 | C | G | 9.5% | 599.1 / 9.8 | 215 | intergenic (‑56/+114) | PP_1748/PP_1749 | hypothetical protein/acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (71/114); new base G (18/4); total (95/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.42e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 216 total aligned reads displayed.
TGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGT > NC_002947/1952638‑1952935 | tgtCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTC < 2:4063382‑M1/150‑1 (MQ=255) tCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGC < 1:1060828‑M1/150‑1 (MQ=255) tCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGC < 1:286971‑M1/150‑1 (MQ=255) tCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGC < 1:6123122‑M1/150‑1 (MQ=255) tGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGaaa < 1:6685098/150‑1 (MQ=255) gAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAg < 1:4583485/150‑1 (MQ=255) ccGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGcc < 1:8137553/150‑1 (MQ=255) gTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCa > 2:3798394/1‑150 (MQ=255) gCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCg < 2:5145070/150‑1 (MQ=255) tGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGc < 1:7770540/150‑1 (MQ=255) gggATGGCGAGCTTTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGccc < 2:732176/150‑1 (MQ=255) ggATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCTTTGCGGccct < 1:5240726/150‑2 (MQ=255) ggATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCTTTGCGGccct < 1:3831399/150‑2 (MQ=255) ggATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGcccc < 1:1619270/150‑1 (MQ=255) gATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCTTTGCGGccctt < 2:8246923/150‑3 (MQ=255) ttGGCGAGAATTTCCAGCTGCACGGTTTTGAGATTGTCGAGATGGGTTTGGGGGAGTCGTTCGTACATGTCCTGGCCTCGGGTGGGGTTAAAATTTTGCAGTCTTGTGGGCGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCgg < 1:43138/149‑1 (MQ=25) ggCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCTTTGCGGccctttcg < 2:8103361/150‑6 (MQ=255) gCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTTTTGGTGGGGCCGTGGGTTGCGAGaggggcccgaaacgcccccccccc > 1:4472656‑M1/1‑126 (MQ=255) gCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggt < 1:1072392‑M1/150‑25 (MQ=255) gAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGTGCGGGCGTGTGTGGGGGATGGGGCGCCCAGCGGCCCCCGccaaa > 1:2815115/1‑146 (MQ=255) gAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGGCGTGTGGGGCGGAAGGGCCGCCAAACGGCCCCCGCacaa > 2:3834294/1‑147 (MQ=255) gAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGTGTCGCGCAAGGGCCGCCAAGCGGCCCCCGcccga > 2:4169216/1‑146 (MQ=255) tttCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTTTGTGGCGGAAGGGCCGCAAAGCGGCCCCCGCaaaaaaggc > 2:3871002/1‑143 (MQ=255) tttCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGTGTCGCGATAGGGCCGCAAACCGCCCCCGGGCATATAggg > 2:6792062/1‑149 (MQ=255) tttCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCATGTGTCGCAAAAGGGCCGCAAAGCGGCCCCGGCAAAATCGGc > 2:1439694/1‑150 (MQ=255) ttCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCCGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCa < 2:1011942/150‑1 (MQ=255) cagcagCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGGCATGTGTGGCGAAAGGGCCGCCAAGCGGCCCCGGCCATATCGGccccc > 2:4865057/1‑146 (MQ=255) agcagcACGCGTTTGAGATTGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTGGTGGGAGCGGCCTGGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGa < 2:2476560/150‑1 (MQ=255) gcaCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCt < 2:1268490/150‑1 (MQ=255) gcaCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCCGGCGTGTGTCCAGAAAGGGGCCCAAAACCGCCCCCGCAATATCGGAAAAGAAGCt > 2:8188603/1‑150 (MQ=255) gcaCGCGTGTGAGATCGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGGCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCt < 2:5688606/150‑1 (MQ=255) caCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTg < 1:5835468/150‑1 (MQ=255) gTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCATGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGAcc < 2:6962005/150‑1 (MQ=255) tttGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTTGGAGCGGCCGTTTGTGGCCAAAGGGCCGCCAAACGGCCCCCGCCAAATAGGCCGCGAAGCAGAGAccc > 2:5568073/1‑150 (MQ=255) tttGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCACAATCGGCACCGAAGCTGGGAccc > 2:4934505/1‑150 (MQ=255) tttGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGGGTCGCGAAAGGGCCCCAAAGCGGCCCCGGCCAAATCGGCAGCGCAGCTGAGAccc > 2:3577867/1‑150 (MQ=255) gaTAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccgggg > 1:1829762‑M1/1‑98 (MQ=255) gaTAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAggg > 1:7644010/1‑150 (MQ=255) gTCGAGATGGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGGGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGgcgc < 1:5104951/150‑1 (MQ=255) tCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGGCGTGTTTGGGGTAAGGGCCGCAAAACCGCCCCCGCCAAAAAGGCAGCCAAACAGAGAACCAAAGGgcgcg > 1:7251471/1‑149 (MQ=255) cGAGATCGGGTTCGGGGAGTCGTTCGGACAGGTCCAGGCCTCCGGTCGGGTTAAATTTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCtt < 2:4549146/150‑1 (MQ=255) gctaTCGGGTTCGGGGAGTCGTTCGCACTTGTCCAGGCCTCGGGGGGGGTTAAAATTTGGCAGTCTTGTGGGAGCGGCCTTGTGGCGCGAATGGGCCCCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 1:2652067/147‑1 (MQ=255) gagagggggTTGGGGGAGTCGTTCGGACTTGTCCTGGCCCCCGGTGGGGTTAAATTTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 1:6004990/144‑1 (MQ=37) gctgggtgatctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggctctgtgggtGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 2:4420365‑M2/80‑1 (MQ=255) ggggTTGGGGGTGTCTTTGGGACTTTTCCAGGCCTCGGGGGGGTTTAAAATTTTGCTGTGTTGTGGGCGGGGCGGTGTGGCGCTAATGGGCCGAAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAcc < 1:1213616/149‑1 (MQ=255) ggTTCGGGGAGTCGTTCGGACATGTCCAGGCCGCCGGTCGGTTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAcccc < 2:3763104/150‑1 (MQ=255) ttCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAt > 2:5503541‑M2/1‑149 (MQ=255) cGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttc < 1:3868102‑M1/150‑71 (MQ=255) atctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggctctgtgggtGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTc < 1:2242040‑M2/88‑1 (MQ=255) ggggAGTCGTTCGGCCATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcg > 2:7632397‑M2/1‑146 (MQ=255) gggAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGTTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagtgtctcagcttctctgccgatattgccggggccgctttgcggccctttcgc < 1:4795801‑M1/150‑73 (MQ=255) gggAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgc < 2:1829762‑M1/150‑73 (MQ=255) gggAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCATTTGTCGCGAAATGGCCGCCAAGCGGCCCCCGCAAAATCGGCACCGCAGCTGAGACCCTACGGGCGCGTCGcccccccatagc > 2:6448925/1‑144 (MQ=255) gAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCCGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcga < 2:3243613‑M1/150‑75 (MQ=255) tCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacac < 1:7522639‑M1/150‑78 (MQ=255) tCGGACTTGTCCTGGCCTCCGGTGGGTTTAAAATTTTGCTGTGTTGTGGGCGCGGCCTGGTGTCGCGAACGGGCCCCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaagg > 1:2244025‑M2/1‑136 (MQ=255) tCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaagg > 2:2666423‑M2/1‑136 (MQ=255) ggACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAATCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggcc < 2:4355599‑M1/150‑84 (MQ=255) gACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGCGCGGCCGTGTGTCGCGGAAGGGGCGCAAACCGGCCCCCGCCAAAAAGGCAGCGCACCGGAGACCCAACGGGCCCGTCGCACCCCAATAGCGACACaaacccc > 2:7695495/1‑145 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTTTGTAGCGAAAGGGCCCCAAAACGGCCCCCGCAAAATCGGCAGCGCAGCTGTGACCCAAGGGGCGCTTAGCACCCCAttcgcgacccaaggccgctccca < 2:8725668‑M2/150‑24 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGcttt < 2:6967840/71‑4 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGcttt > 1:6967840/1‑68 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCaa > 2:7975416/1‑70 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAAAATCGGCAGCGAAGCTGAGACCCTAGGGGGGCTTCGCACCCCAatcgcgacacaagcccgctccca < 2:7063148‑M2/150‑24 (MQ=255) ccAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacac < 2:6471673‑M2/136‑11 (MQ=255) tCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGATCGGCCGTGTGTCGCGAAAGGGCCCCAAAACGGCCCCCGCCAAAAACGCACCCAAAAATAGACCCAAGGGGCCCGTACCACCCCCTACCCCACACAACGCCGCACCCACaaaaaac > 2:2752619/1‑148 (MQ=255) cgggTCGGTTTAAATTTTTGCTGTGTTGTGGGTGCGGCATTTTGTCGCGAATGGGCCGCAACGGGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCTCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGcc < 2:2022449/148‑1 (MQ=21) ccGGTCGGTTTAAATTTTTGCTGTGTTGTGGGTGGGGCCGGGTGGCGCGACCGGGCCGAAACGCGGCCCCGGCAATATCGGCAGCGACGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGcc < 2:8555355/150‑1 (MQ=25) gTCGGTTTAAATTTTTGCTGTCTGGTGGTAGCGGCCTTGTGTCGCGAACGGGCCGAAACGCGGCCCCGGAAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAg < 2:3526183/150‑1 (MQ=25) gTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGTGTAGCGAAATGGCCGCAAAGCCGCCCCCGCAAAATAGGCAGCCCAGCAGAGACCCAAGGGGCGCGTCGCACCCCAAAAGCGACACAAAGCCGCACCCACAAAAAACCGac > 2:1416735/1‑149 (MQ=255) ggggATAAATTTGTGCAGGCGTGGGGCCGCGGCCTTGGGGCGCGACGGGGCCCCAACCCGCCCCCGCCAATCTCGGCAGCGACGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCa < 2:6294467/149‑1 (MQ=19) ggTTAAATTTTTGCTGTCTTGTGGGAGCGGCCTTGTGTCGCTAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGt < 2:4361135/150‑1 (MQ=255) attttgGCAGTCTTGTGGTTGGGGCCTTTTGTGGCGAAGGGGCCGAATTCGGGCCCGGGCAATATCGGCAGCGAAGCTGAGACCCTTGGGGCGCTTCGCACCCCATTCGCGACACATGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAg < 2:8415971/148‑1 (MQ=255) aaTTTTGCAGTCTTGTGGGTGCGGGCGTGTGTGGCGGGAGGGCCGCCAAGCGGCCCCGGCCCGTTCGGCAGCGGGGCGGGGGCCCGAGGGGCGCTTGGCCCCCCCGGGGCGGCACCAGGCCGGGGCCCCCGAAAGCCGGGCGGTTGtggg > 2:2458201/1‑147 (MQ=255) aaTTTTCCCGTCTTGTGGGAGCGGCATTGGGACGCCACCGGCCCCCACCGCGCCCCCGGCAATATCGGCAGCCAAGCTGAGACCCTCGGGGCGCTTCCCACCCAATCCGCCACAAAAGCCCGCTCCCACAAAAAGCCGAGCAGTTGTCAg < 2:8164234/150‑1 (MQ=255) cAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAATGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAAcg < 2:8718376/150‑1 (MQ=255) ttGTGGGCGGGGCCTGGGGGCGCGAAGGGGCCGCAACGCGCCCCCGGAAATATCGGCAGCGACGCTGAGCCCCTCGGGGCGCTTCGCCCCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAAcggccgg < 2:4433055/150‑1 (MQ=25) gtgGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAGTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAAcggccggcg > 2:5746506/1‑149 (MQ=255) ggAGCGGCCTTGTGTCGCGAAATGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCGTCGCACCCCAATCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACCGCCGGCGATg > 2:6237428/1‑150 (MQ=37) cgcggcgTGGTGTCGCGACTGGGCCGAAACGGGGCCCCGGCAATATGGGCAGCGAAGCTGCGACCCTGGGGGGGCTTCGCACCCCATCCGCGACACACGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATggg < 2:507563/149‑1 (MQ=255) aGCGGCGTTGTGTCGCTAACGGCCCGAAATGCGGCCCCGGAAATATCGGCAGCGAAGCTGAGACCATCGGGGCGCTACGCACCCATTTCGCGACACATGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATggg < 2:2624594/150‑1 (MQ=255) cGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtc < 1:1698727‑M2/150‑67 (MQ=255) ggCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtcc > 2:6773399‑M1/1‑16 (MQ=255) ccTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccga > 2:608219‑M1/1‑14 (MQ=255) cTTGTGTCGCGATtgggttgcgaagcgccctttgggtctcagcttcgctgagttttttgccggggccgttttgcggccctttcgctacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaa < 2:1821475‑M1/150‑138 (MQ=255) cTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAca > 2:8515646/1‑150 (MQ=255) cTTGTGGCGCGACgggggtgcgacgcgccccttgggcctcagcttggctgagtattttgccggggccgctttggggccctttcgcgacacacggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaa < 2:3524101‑M1/150‑138 (MQ=255) cTTGGGTCGCTTTtggggtgcgacgcgcccctcgggtctcagcttggctgccgattttgcgggggccggtttggggcccttgcgcgacacacggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaa < 2:8502845‑M1/150‑138 (MQ=255) ttGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaac > 2:640698‑M1/1‑12 (MQ=255) gtgtCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctgg > 1:6471673‑M1/1‑10 (MQ=255) gggcgcgAATGGGCGGCACCGGGGCCCCGCAAATATCGGCAGCGCAGCTGTGACCCTTGGGGCGCTTCGCACCCCATGCGCGACACTGGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagcag < 2:7584320/147‑1 (MQ=255) tCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacacggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactc > 2:4907238‑M1/1‑7 (MQ=255) tCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagacggcaaaattttaacccgaccggaggcctggacaggtccgaacgactc > 2:4737338‑M1/1‑7 (MQ=255) tCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgcgtttcggcccgttagcgacacacggcccctcccacaagactgccaaattttaaaccgaccggaggccgggacaagtccgaacgactc > 1:3042035‑M1/1‑7 (MQ=255) tCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgcgttgcggccctttcgcggcccaaggccgcgcccacaagacggccaaattttaaaccgacccgaggccgggacatgtccgaacgacac > 1:1175304‑M1/1‑7 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactc < 1:3538432‑M2/150‑77 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:2309228/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:1905819/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:325311/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:5769593/1‑150 (MQ=255) | TGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGT > NC_002947/1952638‑1952935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |