| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,952,812 | G→C | 16.9% | intergenic (‑81/+89) | PP_1748 ← / ← PP_1749 | hypothetical protein/acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,952,812 | 0 | G | C | 16.9% | 491.7 / 35.1 | 186 | intergenic (‑81/+89) | PP_1748/PP_1749 | hypothetical protein/acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (83/69); new base C (31/3); total (114/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.23e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 193 total aligned reads displayed.
TGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGC > NC_002947/1952665‑1952961 | gAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGTGCGGCCGTGTGTGGGGGAGGGGCCGCAAAGCCGCCCCCGCCata > 1:2815348/1‑150 (MQ=255) gAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGGCGTGTGGGGCGGAAGGGCCGCCAAACGGCCCCCGCacaa > 2:3834294/1‑147 (MQ=255) gAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGGCCTGTGTGGGGGAAGGGCCGCCAAACGGCCCCCGCaaaa > 2:945172/1‑148 (MQ=255) tttCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTTTGTGGCGGAAGGGCCGCAAAGCGGCCCCCGCaaaaaaggc > 2:3871002/1‑143 (MQ=255) tttCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCATGTGTCGCAAAAGGGCCGCAAAGCGGCCCCGGCAAAATCGGc > 2:1439694/1‑150 (MQ=255) ttCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCCGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCa < 2:1011942/150‑1 (MQ=255) agcagcACGCGTTTGAGATTGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTGGTGGGAGCGGCCTGGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGa < 2:2476560/150‑1 (MQ=255) agcagcACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTTTTTGGCCACAGGGCCGCCAAACCGCCCCCGCCAAAAAGGCAGcca > 2:3978627/1‑148 (MQ=255) gcaCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCt < 2:1268490/150‑1 (MQ=255) gcaCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCCGGCGTGTGTCCAGAAAGGGGCCCAAAACCGCCCCCGCAATATCGGAAAAGAAGCt > 2:8188603/1‑150 (MQ=255) aCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTTTAGCGAAAGGGCCGCAAAGCCGCCCCCGCAATATAGGCAGCCAAGCTgt > 2:2130213/1‑149 (MQ=255) aCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTga < 2:5036097/150‑1 (MQ=255) gTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGTGCGGCCGTGTGGGGGGGAATGGCCGCAAATAGGGCCCCCCAAAAAAGGCAGGGAATCAGAGAcc > 1:2772317/1‑150 (MQ=255) gTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCATGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGAcc < 2:6962005/150‑1 (MQ=255) tttGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTTGGAGCGGCCGTTTGTGGCCAAAGGGCCGCCAAACGGCCCCCGCCAAATAGGCCGCGAAGCAGAGAccc > 2:5568073/1‑150 (MQ=255) gaTAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAggg > 1:7644010/1‑150 (MQ=255) cgtgaTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCtt < 2:4549134/147‑1 (MQ=255) gtgaTGGGGTTGGGGGTGTGTTTCGTACTTGCCCCGGCCTGGGGTGGTTTTAAAT‑TTGTGCCGTGTTGGGGGCGCGGCGTTGTGTGGCGAAGGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 1:980501/148‑1 (MQ=255) gagttggggttggggttgTCTTTCGTACTTGTCCCGGCCTCGGGTGGGTTTAAAT‑TTTGGCAGTCTTGTGGGCGCGGCGTTGTGGCGCTAACGGGCCGAAAAGCGCCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 1:194952/144‑1 (MQ=255) gagaTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCTGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 2:5138823/150‑1 (MQ=255) ctcgcGGTTTCGGGGCGTGGTTCGGCCATGACCCGGCC‑CCGGGTGGGTTAAAATTTTTGACGTCTTGTGGGCGCGGCCTTGTGTCGCGAACGGGCCGAAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCg < 1:182045/146‑1 (MQ=255) aTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGACTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTAGCCAAAGGGCCCCAAAGCCGCCCCCGCAAAAACCGCCCCCAAGCTGAGACCCAAGTGGCGCGTAGCa > 2:5738005/1‑150 (MQ=255) gctgggtgatctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggctctgtgggtGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 2:4420503‑M2/80‑1 (MQ=255) gctgggtgatctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggctctgtgggaGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 1:4339924‑M2/80‑1 (MQ=255) ggggTTGGGGGTGTCTTTGGGACTTTTCCAGGCCTCGGGGGGGTTTAAAA‑TTTTGCTGTGTTGTGGGCGGGGCGGTGTGGCGCTAATGGGCCGAAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAcc < 1:1213616/149‑1 (MQ=255) gggtgatctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggttctgtgggtGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAgcc < 1:2275511‑M2/83‑1 (MQ=255) ggTTCGGGGAGTCGTTCGGACATGTCCAGGCCGCCGGTCGGTTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAcccc < 2:3763104/150‑1 (MQ=255) ttCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAt > 2:5503541‑M2/1‑149 (MQ=255) ggggAGTCGTTCGGCCATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcg > 2:7632397‑M2/1‑146 (MQ=255) atctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggctctgtgggtGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTc < 1:2242040‑M2/88‑1 (MQ=255) gggAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCATTTGTCGCGAAATGGCCGCCAAGCGGCCCCCGCAAAATCGGCACCGCAGCTGAGACCCTACGGGCGCGTCGcccccccatagc > 2:6448925/1‑144 (MQ=255) gggAGTCGTTCGGACATGTCCAGGCCGCCGGTCGGGTTAAAA‑TTTTGCAGTCTGGTGGGCGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgc > 2:3260627‑M2/1‑145 (MQ=255) gtgtcGTTCGGACATGTCCCGGCCTCGGGTCGGTTTAAAA‑TTTGGCCGTCTTGTGGGCGCGGCCTTGGGCCGCGAAAGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcga > 1:1175304‑M2/3‑143 (MQ=255) gAGTCGTTCGGACTTGTCCCGGCCTCCGGTCGGTTTAAAA‑TTTGGCAGTCTTGTGGGAGGGGCCGTGTGTCGCTAACGGGCCGAAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcga > 1:3042035‑M2/1‑143 (MQ=255) gAGTCGTTCGGACCTGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCCGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcga > 2:4737338‑M2/1‑143 (MQ=255) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTAGCGAAAGGGCCGCAAAACGGCCCCGGCAAAAAACTCAGCGAAGCTGAGACCCAAAGGGCGCTTCGCAACCCAatcgcgacacaag < 2:1821475‑M2/150‑14 (MQ=255) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTGTGTGGCGGAAGGGCCGCAAAGCCGCCCCCGCCAGAAAGGCAGCCAACCAGAGAACCGAGGGGCGCGTCGCACCCCAAACGCGACCCaac > 1:7147348/1‑149 (MQ=255) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTGTGTCGCGCAAGGGCCCCAAACCGGCCCCCGCAAAATCGGCAGCCAAGCTGAGACCCGAGGGGCGCGTCGCACCCCAaaagcgacccaag < 2:8502845‑M2/150‑14 (MQ=255) tCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaagg > 2:608219‑M2/1‑136 (MQ=255) ggACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggcc > 2:6773399‑M2/1‑134 (MQ=255) gACTTGTCCCGGCCTCGGGTGGGTTTAAAT‑TTTTGCAGTGTTGTGGGAGCGGCGTTGTGTGGCGAATGGGCCGAAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccg > 1:1839898‑M2/1‑133 (MQ=255) gACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGCGCGGCCGTGTGTCGCGGAAGGGGCGCAAACCGGCCCCCGCCAAAAAGGCAGCGCACCGGAGACCCAACGGGCCCGTCGCACCCCAATAGCGACACaaacccc > 2:7695495/1‑145 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTTTGTAGCGAAAGGGCCCCAAAACGGCCCCCGCAAAATCGGCAGCGCAGCTGTGACCCAAGGGGCGCTTAGCACCCCAttcgcgacccaaggccgctccca < 2:8725668‑M2/150‑24 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAAAATCGGCAGCGAAGCTGAGACCCTAGGGGGGCTTCGCACCCCAatcgcgacacaagcccgctccca < 2:7063148‑M2/150‑24 (MQ=255) ccAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacac > 1:6471673‑M2/1‑126 (MQ=255) cAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTTTGTGGCGCAAAGGCCCCAAAACCGCCCCCGCAAAAAAGGCAGCCAAGCAGAGAACCAAAGGGGGCGTCGCACCCCCAACGCGAAACAAAGCCGcaaccaaa > 2:4100172/1‑143 (MQ=255) cTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTTTGTCGCGCAATGGCCGCCAAGCGGCCCCCGCAAAAAAGGCCCCGCCACTGTGACCCTAGGGGCGCGACGCCCCCCCCCCGCGACCCAAAGCCGCACCCACaaaaaa > 2:7662012/1‑149 (MQ=255) tCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTTTTTAGCGCAAGGGCCGCAAAGCCGCCCCCGCAAAATAGGCACCCAACCAGAGACCCAAGGGGCGCGTCGCACCCCAAAACCCACACAAAGCCCCACCCAaaaaaaac > 2:2752555/1‑148 (MQ=255) ggTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGGCATGTGTGGCCCAAGGGCCCCCAACCCGCCCCCGCAAAATAGGCCGCGCAGCTGAGACCCCAGGGGCGCGTCGCACCCCAAGCGCGCCACAAAGCCCCGCCCACAAAAAAcccc > 2:6850641/1‑148 (MQ=255) gTCGGTTTAAAT‑TTTTGCTGTCTGGTGGTAGCGGCCTTGTGTCGCGAACGGGCCGAAACGCGGCCCCGGAAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAg < 2:3526183/150‑1 (MQ=25) gTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCGTGTGTAGCGAAATGGCCGCAAAGCCGCCCCCGCAAAATAGGCAGCCCAGCAGAGACCCAAGGGGCGCGTCGCACCCCAAAAGCGACACAAAGCCGCACCCACAAAAAACCGac > 2:1416735/1‑149 (MQ=255) ggggATAAAT‑TTGTGCAGGCGTGGGGCCGCGGCCTTGGGGCGCGACGGGGCCCCAACCCGCCCCCGCCAATCTCGGCAGCGACGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCa < 2:6294467/149‑1 (MQ=19) ggTTAAAT‑TTTTGCTGTCTTGTGGGAGCGGCCTTGTGTCGCTAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGt < 2:4361135/150‑1 (MQ=255) aa‑TTTTCCCGTCTTGTGGGAGCGGCATTGGGACGCCACCGGCCCCCACCGCGCCCCCGGCAATATCGGCAGCCAAGCTGAGACCCTCGGGGCGCTTCCCACCCAATCCGCCACAAAAGCCCGCTCCCACAAAAAGCCGAGCAGTTGTCAg < 2:8164234/150‑1 (MQ=255) attttgGCAGTCTTGTGGTTGGGGCCTTTTGTGGCGAAGGGGCCGAATTCGGGCCCGGGCAATATCGGCAGCGAAGCTGAGACCCTTGGGGCGCTTCGCACCCCATTCGCGACACATGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAg < 2:8415971/148‑1 (MQ=255) ttttGCTGTCTTGTGGGAGCGGCGGTGTGTCGCGAACGGGCCGAAACGGGGCCCCGGCAATATCGGAAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGc < 2:4898779/150‑1 (MQ=25) gtgGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAGTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAAcggccggcg > 2:5746506/1‑149 (MQ=255) ggAGCGGCCTTGTGTCGCGAAATGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCGTCGCACCCCAATCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACCGCCGGCGATg > 2:6237428/1‑150 (MQ=37) cgCGTCCTTGGTTCGCGAACGGGCCGCTTCGCGGCCCCGGCATTATCGGCTGCGAAGCTGCGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAATAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATggg < 2:8557108/149‑1 (MQ=25) aGCGGCGTTGTGTCGCTAACGGCCCGAAATGCGGCCCCGGAAATATCGGCAGCGAAGCTGAGACCATCGGGGCGCTACGCACCCATTTCGCGACACATGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATggg < 2:2624594/150‑1 (MQ=255) ggCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagattgcaaaattttaacccgaccggaggcctggacatgtcc < 2:4355599‑M2/150‑68 (MQ=255) ccTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAc > 2:2789325/1‑150 (MQ=255) cTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAca > 2:8515670/1‑150 (MQ=255) ttGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcag > 2:8342954/1‑150 (MQ=255) gtgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacga < 1:7522639‑M2/150‑74 (MQ=255) gtgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagca > 1:5582737/1‑150 (MQ=255) tgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACAGAAGGCCGCTCCCACCAAAAGCCGAGCAGTTGTCAGGCCGACGGCCGGCTATGGGGAAAcagcag > 1:5926286/1‑150 (MQ=255) gggcgcgAATGGGCGGCACCGGGGCCCCGCAAATATCGGCAGCGCAGCTGTGACCCTTGGGGCGCTTCGCACCCCATGCGCGACACTGGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagcag < 2:7584320/147‑1 (MQ=255) gtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAgg > 1:4258250/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactc < 1:3538432‑M2/150‑77 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 2:1114466/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:5769593/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:2309369/1‑150 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCg > 1:4156084/1‑150 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGAGAAGCTGAGACACTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaaaccgaccggaggcctggacatgtccgaacgactccc < 1:4795801‑M2/150‑79 (MQ=255) gAAAGGGCCGCAACGCGGCCCCGGAAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGAt < 2:6388007/150‑1 (MQ=255) gAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactccccg < 1:3868102‑M2/150‑81 (MQ=255) gAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGAt > 2:2563734/1‑150 (MQ=255) gAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGAt > 1:7436640/1‑150 (MQ=255) ccggggCCGCTTTGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATa > 1:1417468/4‑150 (MQ=255) ggggCCGCTTTGCGGCCCCGGCAATATCGGCAGCGAAGCAGAGACCCTAGGGGCGCTTCGCACCCCAATCGCGACACAAGGCCGCACCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGCAACAGCAGGTCGATaaa > 1:8534201/2‑150 (MQ=38) ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGc > 2:4931929/1‑150 (MQ=255) cGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCt > 2:8234123/1‑150 (MQ=255) gCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTc > 1:7024601/1‑150 (MQ=255) gCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTc > 2:5673958/1‑150 (MQ=255) gCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTc > 2:5393570/1‑150 (MQ=255) gCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTc > 1:3390479/1‑150 (MQ=255) gCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTc > 1:5652004/1‑150 (MQ=255) cAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTcg > 1:2894228/1‑150 (MQ=255) aGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTcggcg > 2:7897155/1‑150 (MQ=255) gCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTcggcgg > 2:6581925/1‑150 (MQ=255) cGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGt < 2:1948403/150‑1 (MQ=255) ccccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGGTGTCAGGCCCACGGCCGGCTATGGGGAAACAGCAGGTCGATCAAACGCTCGGCGGTggg > 2:217874/1‑150 (MQ=255) cccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGc > 1:8202159/1‑150 (MQ=255) ccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCaa > 2:3017116/1‑100 (MQ=255) cGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTg > 2:8128125/1‑150 (MQ=255) cGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTg > 2:1774881/1‑150 (MQ=255) ggCAATATCGGCCGCGAAGCTGAGACCCTCGGGGCGCTCCGCACCCCATCCGCGACACGCGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGc < 1:3798288/150‑1 (MQ=255) ggCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAACCAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGc > 2:8315885/1‑150 (MQ=255) ggCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGc > 2:4484963/1‑150 (MQ=255) | TGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAA‑TTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGC > NC_002947/1952665‑1952961 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |