| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,952,820 | C→A | 12.9% | intergenic (‑89/+81) | PP_1748 ← / ← PP_1749 | hypothetical protein/acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,952,820 | 0 | C | A | 12.9% | 490.8 / 27.4 | 195 | intergenic (‑89/+81) | PP_1748/PP_1749 | hypothetical protein/acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (97/66); new base A (20/10); total (117/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 200 total aligned reads displayed.
TTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATG > NC_002947/1952674‑1952969 | tttCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTTGGTGGCGGAAGGGCCGCAAAGCCGCCCCCGCCAAATAGGc > 1:2832333/1‑150 (MQ=255)tttCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGTGTCGCGATAGGGCCGCAAACCGCCCCCGGGCATATAggg > 2:6792062/1‑149 (MQ=255) ttCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCCGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCa < 2:1011942/150‑1 (MQ=255) gcaCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCt < 2:1268490/150‑1 (MQ=255) aCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTTTAGCGAAAGGGCCGCAAAGCCGCCCCCGCAATATAGGCAGCCAAGCTgt > 2:2130213/1‑149 (MQ=255) aCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTga < 2:5036097/150‑1 (MQ=255) tttGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTTGGAGCGGCCGTTTGTGGCCAAAGGGCCGCCAAACGGCCCCCGCCAAATAGGCCGCGAAGCAGAGAccc > 2:5568073/1‑150 (MQ=255) aTAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAgggg > 1:1281126/1‑150 (MQ=255) tCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCCTTTTTCGCCAAAGGGCCCCCAAGCCGCCCCCGCAAAATACGCAGCGAACGTGTGAACCGAGGGgcgcg > 2:6607773/1‑149 (MQ=255) cGAGATCGGGTTCGGGGAGTCGTTCGGACAGGTCCAGGCCTCCGGTCGGGTTAAATTTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCtt < 2:4549146/150‑1 (MQ=255) gtgaTGGGGTTGGGGGTGTGTTTCGTACTTGCCCCGGCCTGGGGTGGTTTTAAATTTGTGCCGTGTTGGGGGCGCGGCGTTGTGTGGCGAAGGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 1:980501/148‑1 (MQ=255) gctaTCGGGTTCGGGGAGTCGTTCGCACTTGTCCAGGCCTCGGGGGGGGTTAAAATTTGGCAGTCTTGTGGGAGCGGCCTTGTGGCGCGAATGGGCCCCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 1:2652067/147‑1 (MQ=255) gagaTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCTGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 2:5138823/150‑1 (MQ=255) gctgggtgatctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggctctgtgggtGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 2:4420503‑M2/80‑1 (MQ=255) gctgggtgatctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggctctgtgggtGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 2:6337774‑M2/80‑1 (MQ=255) gctgggtgatctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggctctgtgggaGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 1:4339924‑M2/80‑1 (MQ=255) aTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGACTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTAGCCAAAGGGCCCCAAAGCCGCCCCCGCAAAAACCGCCCCCAAGCTGAGACCCAAGTGGCGCGTAGCa > 2:5738005/1‑150 (MQ=255) tCGGGTTCGGGGAGTCGTTCGGACTTGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAc < 2:583735/150‑1 (MQ=255) ggTTCGGGGAGTCGTTCGGACATGTCCAGGCCGCCGGTCGGTTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAcccc < 2:3763104/150‑1 (MQ=255) gTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCATGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATACGCCGCGAACCAGAGACCCAAAGGGCGCGTCGCACCCCa > 2:8029161/1‑150 (MQ=37) ttCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAt > 2:5503541‑M2/1‑149 (MQ=255) ggggAGTCGTTCGGCCATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcg > 2:7632397‑M2/1‑146 (MQ=255) gggAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTT‑AAATTTTGCAGTCTTGTGGGCGCGGCCATGTGTGGCGAAAGGGCCCCAAAACCGCCCCCGCAAAAACGGCACCCAAACATGGACCCAAGGGGCGCGTAGCACCCCaaaaccg > 2:1443300/1‑144 (MQ=255) gggAGTCGTTCGGACATGTCCAGGCCGCCGGTCGGGTTAAAATTTTGCAGTCTGGTGGGCGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgc > 2:3260627‑M2/1‑145 (MQ=255) gtgtcGTTCGGACATGTCCCGGCCTCGGGTCGGTTTAAAATTTGGCCGTCTTGTGGGCGCGGCCTTGGGCCGCGAAAGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcga > 1:1175304‑M2/3‑143 (MQ=255) gAGTCGTTCGGACCTGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCCGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcga > 2:4737338‑M2/1‑143 (MQ=255) gTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaa > 2:640698‑M2/1‑138 (MQ=255) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGGCGTGTGTCGCGCAATGGCCCCCAAGCCGCCCCGCCAAAATAGGCCCCGAAGCGGAGACCCCACGGGCGCGTCGCACCCCCAGCGCGACACAAg > 2:6218078/1‑150 (MQ=255) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGTGTGGCGGAAGGGCCGCAAAGCCGCCCCCGCCAGAAAGGCAGCCAACCAGAGAACCGAGGGGCGCGTCGCACCCCAAACGCGACCCaac > 1:7147348/1‑149 (MQ=255) tCGGACTTGTCCTGGCCTCCGGTGGGTTTAAAATTTTGCTGTGTTGTGGGCGCGGCCTGGTGTCGCGAACGGGCCCCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaagg > 1:2244025‑M2/1‑136 (MQ=255) tCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaagg > 2:2666423‑M2/1‑136 (MQ=255) ggACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGTGGCGCGCAAGGGCCGCAAAGCGGCCCCCGCCACATCGGCAGCCCACCGGAGACCCGCCGGGCGCGGCGCCCCCCCATCGCGACACCAGGcc > 2:6964384/1‑150 (MQ=255) ccAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacac > 1:6471673‑M2/1‑126 (MQ=255) ccAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacac < 2:6471673‑M2/136‑11 (MQ=255) cTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTTTGTCGCGCAATGGCCGCCAAGCGGCCCCCGCAAAAAAGGCCCCGCCACTGTGACCCTAGGGGCGCGACGCCCCCCCCCCGCGACCCAAAGCCGCACCCACaaaaaa > 2:7662012/1‑149 (MQ=255) tCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGATCGGCCGTGTGTCGCGAAAGGGCCCCAAAACGGCCCCCGCCAAAAACGCACCCAAAAATAGACCCAAGGGGCCCGTACCACCCCCTACCCCACACAACGCCGCACCCACaaaaaac > 2:2752619/1‑148 (MQ=255) ccGGTCGGTTTAAATTTTTGCTGTGTTGTGGGTGGGGCCGGGTGGCGCGACCGGGCCGAAACGCGGCCCCGGCAATATCGGCAGCGACGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGcc < 2:8555355/150‑1 (MQ=25) gTCGGTTTAAATTTTTGCTGTCTGGTGGTAGCGGCCTTGTGTCGCGAACGGGCCGAAACGCGGCCCCGGAAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAg < 2:3526183/150‑1 (MQ=25) gTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGTGTAGCGAAATGGCCGCAAAGCCGCCCCCGCAAAATAGGCAGCCCAGCAGAGACCCAAGGGGCGCGTCGCACCCCAAAAGCGACACAAAGCCGCACCCACAAAAAACCGac > 2:1416735/1‑149 (MQ=255) gggtatAAAATTTTGCCGCCTTGTGGGAGCGGCCTTGGGCCGCGAACGGGCCGCAAAGCGCCCCGGGCATTAGCGGCCGCTACGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCa < 2:6294138/145‑1 (MQ=21) ggTTAAATTTTTGCTGTCTTGTGGGAGCGGCCTTGTGTCGCTAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGt < 2:4361135/150‑1 (MQ=255) ttAAAATTTTGCAGTCTTGTGGGAGCCGCCGTGTGTCGCCAAAGGGCCGCAAAGCGGCCCCCCCCCTATAGGCAGCGAAGCAGCGACCCAAGGGGCCCGTCGCACCCCATAAGCGACACCACGCCGCACCCACAAAAAGCCCAGCacatg > 2:8476127/1‑146 (MQ=255) aaaTTTTGCCGTGTTGGGGGAGCGGCCTGGTGTCGCGAACGGGCCGCAAAGGGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCa < 2:1439362/150‑1 (MQ=25) aaTTTTGCAGTCTTGTGGGTGCGGGCGTGTGTGGCGGGAGGGCCGCCAAGCGGCCCCGGCCCGTTCGGCAGCGGGGCGGGGGCCCGAGGGGCGCTTGGCCCCCCCGGGGCGGCACCAGGCCGGGGCCCCCGAAAGCCGGGCGGTTGtggg > 2:2458201/1‑147 (MQ=255) aaTTTTCCCGTCTTGTGGGAGCGGCATTGGGACGCCACCGGCCCCCACCGCGCCCCCGGCAATATCGGCAGCCAAGCTGAGACCCTCGGGGCGCTTCCCACCCAATCCGCCACAAAAGCCCGCTCCCACAAAAAGCCGAGCAGTTGTCAg < 2:8164234/150‑1 (MQ=255) ttttGCTGTCTTGTGGGAGCGGCGGTGTGTCGCGAACGGGCCGAAACGGGGCCCCGGCAATATCGGAAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGc < 2:4898779/150‑1 (MQ=25) cAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAATGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAAcg < 2:8718376/150‑1 (MQ=255) gcgCGGCCTGGGGCGGCGAACGGGCCGCACCGCGCCCCCGGCAATAGCGGCCGCGACGCTGAGACCCTCGGGGCGCTGCGCCCCCCTTTCGCGACACACGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATgg < 2:4514748/148‑1 (MQ=255) aGCGGCCTTGGGTCGCGAACGGGCCGCAACGCGCCCCCGGCAATATCGGCAGCGAAGCTGACACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATggg < 2:2624496/150‑1 (MQ=37) cGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtc < 1:1698727‑M2/150‑67 (MQ=255) ggCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagattgcaaaattttaacccgaccggaggcctggacatgtcc < 2:4355599‑M2/150‑68 (MQ=255) cTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAca > 2:8515646/1‑150 (MQ=255) ttGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcag > 2:8342954/1‑150 (MQ=255) ttGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcag > 2:6879205/1‑150 (MQ=255) gtgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacga < 1:7522639‑M2/150‑74 (MQ=255) gtgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagca > 1:5582737/1‑150 (MQ=255) tgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACAGAAGGCCGCTCCCACCAAAAGCCGAGCAGTTGTCAGGCCGACGGCCGGCTATGGGGAAAcagcag > 1:5926286/1‑150 (MQ=255) gggcgcgAATGGGCGGCACCGGGGCCCCGCAAATATCGGCAGCGCAGCTGTGACCCTTGGGGCGCTTCGCACCCCATGCGCGACACTGGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagcag < 2:7584320/147‑1 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactc < 1:3538432‑M2/150‑77 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 2:1114466/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:1905819/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:5769593/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:2309228/1‑150 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCg > 1:7548247/1‑150 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGAGAAGCTGAGACACTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaaaccgaccggaggcctggacatgtccgaacgactccc < 1:4795801‑M2/150‑79 (MQ=255) cgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGa > 2:4041536/1‑150 (MQ=255) cgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGa > 2:2844786/1‑150 (MQ=255) gAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGAt > 1:4023612/1‑150 (MQ=255) ggggCCGCTTTGCGGCCCCGGCAATATCGGCAGCGAAGCAGAGACCCTAGGGGCGCTTCGCACCCCAATCGCGACACAAGGCCGCACCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGCAACAGCAGGTCGATaaa > 1:8534201/2‑150 (MQ=38) gCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACg > 1:4189120/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGc > 2:4931929/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGGTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGc > 1:2125771/1‑150 (MQ=255) cGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCt > 2:8234123/1‑150 (MQ=255) gCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTc > 2:5673958/1‑150 (MQ=255) gCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTc > 1:5652004/1‑150 (MQ=255) gCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTc > 1:3390479/1‑150 (MQ=255) gCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTc > 2:5393570/1‑150 (MQ=255) gCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTc > 1:7024601/1‑150 (MQ=255) aaaGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTcgg > 2:3935946/1‑150 (MQ=255) aGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTCTGGGGAAACAGCAGGTCGATAAAACGCTcggcg > 2:7897146/1‑150 (MQ=255) cGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGt < 2:1948403/150‑1 (MQ=255) ccccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactccccgaacccgatctcgactatc > 1:1829762‑M2/1‑52 (MQ=255) cccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGc > 1:8202159/1‑150 (MQ=255) ccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCaa < 1:3017116/100‑1 (MQ=255) cGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTg > 2:1775460/1‑150 (MQ=255) cGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTg > 2:8128125/1‑150 (MQ=255) ggCATTATCGGCAGCGAAGCTGAGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACGAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGc < 1:3798394/150‑1 (MQ=255) ggCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAACCAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGc > 2:8315885/1‑150 (MQ=255) ggCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGc > 2:2542463/1‑150 (MQ=255) gCATTATCGGCAGCGAAGCTGAGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCg < 2:8762336/150‑1 (MQ=255) gCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCg > 2:967691/1‑150 (MQ=255) aaTCTCGGCAGCGACGCTGACCCCCTCGGGGCGCTTCCCCCCCCATGCGCGACACACGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGt < 2:1826326/150‑1 (MQ=255) aaTATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGt > 2:3175399/1‑150 (MQ=255) tatCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAACACGCTCGGCGGTGGGCTGCGGTTc > 1:7372302/1‑150 (MQ=255) tCGGCCGCGAAGCTGAGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCAt < 2:2815115/150‑1 (MQ=255) tCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCAt > 1:3422094/1‑150 (MQ=255) tCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCAt > 1:3105507/1‑150 (MQ=255) cGGCAGCTACGCTGCGACCCTCGGGGCGCTTCGCACCCCATGCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATg < 2:8357060/150‑1 (MQ=255) cGGCAGCGAAGCTGAGCCCCTCGGGGCGCTCCGCACCCCATCCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATg < 2:8181460/150‑1 (MQ=255) cGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATg > 2:775238/1‑150 (MQ=255) | TTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATG > NC_002947/1952674‑1952969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |