| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,952,837 | C→A | 5.3% | intergenic (‑106/+64) | PP_1748 ← / ← PP_1749 | hypothetical protein/acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,952,837 | 0 | C | A | 5.3% | 639.5 / 13.8 | 197 | intergenic (‑106/+64) | PP_1748/PP_1749 | hypothetical protein/acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (115/69); new base A (5/8); total (120/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 204 total aligned reads displayed.
GTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCA > NC_002947/1952689‑1952985 | gTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCATGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGAcc < 2:6962005/150‑1 (MQ=255) gaTAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAggg > 1:7644010/1‑150 (MQ=255) gTCGAGATGGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGGGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGgcgc < 1:5104951/150‑1 (MQ=255) gTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGGCGTTTTTAGCCCAAAGGCCCCAAACAGGCCCCCGCAAAAACCGCCCCGCAGCCGAGCACCCAGGGgccc > 2:5248064/1‑148 (MQ=255) cGAGATCGGGTTCGGGGAGTCGTTCGGACAGGTCCAGGCCTCCGGTCGGGTTAAATTTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCtt < 2:4549146/150‑1 (MQ=255) gtgaTGGGGTTGGGGGTGTGTTTCGTACTTGCCCCGGCCTGGGGTGGTTTTAAATTTGTGCCGTGTTGGGGGCGCGGCGTTGTGTGGCGAAGGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 1:980501/148‑1 (MQ=255) gctgggtgatctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggctctgtgggtGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 2:4420503‑M2/80‑1 (MQ=255) gctgggtgatctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggctctgtgggaGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 2:81452‑M2/80‑1 (MQ=255) aTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGACTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTAGCCAAAGGGCCCCAAAGCCGCCCCCGCAAAAACCGCCCCCAAGCTGAGACCCAAGTGGCGCGTAGCa > 2:5738005/1‑150 (MQ=255) tCGGGTTCGGGGAGTCGTTCGGACTTGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAc < 2:583735/150‑1 (MQ=255) tCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAc < 2:5603930/150‑1 (MQ=255) ggggTTGGGGGTGTCTTTGGGACTTTTCCAGGCCTCGGGGGGGTTTAAAATTTTGCTGTGTTGTGGGCGGGGCGGTGTGGCGCTAATGGGCCGAAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAcc < 1:1213616/149‑1 (MQ=255) gggtgatctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggttctgtgggtGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAgcc < 1:2275511‑M2/83‑1 (MQ=255) tgcggGGCGTCGTTCGGACCTGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAt > 2:5503560‑M2/3‑149 (MQ=255) atctactggtgccgttgcggcagaagcatcgcagttgaaaggccaacgcgggctctgtgggtGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTc < 1:2242040‑M2/88‑1 (MQ=255) ggggAGTCGTTCGGCCATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGGGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcg > 2:7632397‑M2/1‑146 (MQ=255) gggAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCATTTGTCGCGAAATGGCCGCCAAGCGGCCCCCGCAAAATCGGCACCGCAGCTGAGACCCTACGGGCGCGTCGcccccccatagc > 2:6448925/1‑144 (MQ=255) gggAGTCGTTCGGACATGTCCAGGCCGCCGGTCGGGTTAAAATTTTGCAGTCTGGTGGGCGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgc > 2:3260627‑M2/1‑145 (MQ=255) gtgtcGTTCGGACATGTCCCGGCCTCGGGTCGGTTTAAAATTTGGCCGTCTTGTGGGCGCGGCCTTGGGCCGCGAAAGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcga > 1:1175304‑M2/3‑143 (MQ=255) gAGTCGTTCGGACTTGTCCCGGCCTCCGGTCGGTTTAAAATTTGGCAGTCTTGTGGGAGGGGCCGTGTGTCGCTAACGGGCCGAAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcga > 1:3042035‑M2/1‑143 (MQ=255) gtccGGACAGGCCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCGTGTGGGAGCGGCCGTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACaa < 1:5739095/147‑1 (MQ=37) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGGCGTGTGTCGCGCAATGGCCCCCAAGCCGCCCCGCCAAAATAGGCCCCGAAGCGGAGACCCCACGGGCGCGTCGCACCCCCAGCGCGACACAAg > 2:6218078/1‑150 (MQ=255) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTAGCGAAAGGGCCGCAAAACGGCCCCGGCAAAAAACTCAGCGAAGCTGAGACCCAAAGGGCGCTTCGCAACCCAatcgcgacacaag < 2:1821475‑M2/150‑14 (MQ=255) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGTGTGGCGGAAGGGCCGCAAAGCCGCCCCCGCCAGAAAGGCAGCCAACCAGAGAACCGAGGGGCGCGTCGCACCCCAAACGCGACCCaac > 1:7147348/1‑149 (MQ=255) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGTGTCGCGCAAGGGCCCCAAACCGGCCCCCGCAAAATCGGCAGCCAAGCTGAGACCCGAGGGGCGCGTCGCACCCCAaaagcgacccaag < 2:8502845‑M2/150‑14 (MQ=255) tCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaagg > 2:2666423‑M2/1‑136 (MQ=255) ggACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggcc > 2:6773399‑M2/1‑134 (MQ=255) gACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGCGCGGCCGTGTGTCGCGGAAGGGGCGCAAACCGGCCCCCGCCAAAAAGGCAGCGCACCGGAGACCCAACGGGCCCGTCGCACCCCAATAGCGACACaaacccc > 2:7695495/1‑145 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTTTGTAGCGAAAGGGCCCCAAAACGGCCCCCGCAAAATCGGCAGCGCAGCTGTGACCCAAGGGGCGCTTAGCACCCCAttcgcgacccaaggccgctccca < 2:8725668‑M2/150‑24 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAAAATCGGCAGCGAAGCTGAGACCCTAGGGGGGCTTCGCACCCCAatcgcgacacaagcccgctccca < 2:7063148‑M2/150‑24 (MQ=255) cAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTTTGTGGCGCAAAGGCCCCAAAACCGCCCCCGCAAAAAAGGCAGCCAAGCAGAGAACCAAAGGGGGCGTCGCACCCCCAACGCGAAACAAAGCCGcaaccaaa > 2:4100172/1‑143 (MQ=255) tCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGATCGGCCGTGTGTCGCGAAAGGGCCCCAAAACGGCCCCCGCCAAAAACGCACCCAAAAATAGACCCAAGGGGCCCGTACCACCCCCTACCCCACACAACGCCGCACCCACaaaaaac > 2:2752619/1‑148 (MQ=255) cgggTCGGTTTAAATTTTTGCTGTGTTGTGGGTGCGGCATTTTGTCGCGAATGGGCCGCAACGGGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCTCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGcc < 2:2022449/148‑1 (MQ=21) ggTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGGCATGTGTGGCCCAAGGGCCCCCAACCCGCCCCCGCAAAATAGGCCGCGCAGCTGAGACCCCAGGGGCGCGTCGCACCCCAAGCGCGCCACAAAGCCCCGCCCACAAAAAAcccc > 2:6850641/1‑148 (MQ=255) gTCGGTTTAAATTTTTGCTGTCTGGTGGTAGCGGCCTTGTGTCGCGAACGGGCCGAAACGCGGCCCCGGAAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAg < 2:3526183/150‑1 (MQ=25) gTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGTGTAGCGAAATGGCCGCAAAGCCGCCCCCGCAAAATAGGCAGCCCAGCAGAGACCCAAGGGGCGCGTCGCACCCCAAAAGCGACACAAAGCCGCACCCACAAAAAACCGac > 2:1416735/1‑149 (MQ=255) tCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCGTGTTTCGCGCAAAGGCCGCAAAACGGCCCCGGCAAAAAAGGCAGCGCAGCGGGGGCCCGAGGGGCGCGTGGCCCCCCCGTCGCGCCACAACGCCCCACCCCCAAAAATCCgcgc > 2:8164955/1‑150 (MQ=255) gggtatAAAATTTTGCCGCCTTGTGGGAGCGGCCTTGGGCCGCGAACGGGCCGCAAAGCGCCCCGGGCATTAGCGGCCGCTACGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCa < 2:6294138/145‑1 (MQ=21) ggTTAAATTTTTGCTGTCTTGTGGGAGCGGCCTTGTGTCGCTAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGt < 2:4361135/150‑1 (MQ=255) aaaTTTTGCCGTGTTGGGGGAGCGGCCTGGTGTCGCGAACGGGCCGCAAAGGGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCa < 2:1439362/150‑1 (MQ=25) attttgGCAGTCTTGTGGTTGGGGCCTTTTGTGGCGAAGGGGCCGAATTCGGGCCCGGGCAATATCGGCAGCGAAGCTGAGACCCTTGGGGCGCTTCGCACCCCATTCGCGACACATGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAg < 2:8415971/148‑1 (MQ=255) aaTTTTGCAGTCTTGTGGGTGCGGGCGTGTGTGGCGGGAGGGCCGCCAAGCGGCCCCGGCCCGTTCGGCAGCGGGGCGGGGGCCCGAGGGGCGCTTGGCCCCCCCGGGGCGGCACCAGGCCGGGGCCCCCGAAAGCCGGGCGGTTGtggg > 2:2458201/1‑147 (MQ=255) ttttGCTGTCTTGTGGGAGCGGCGGTGTGTCGCGAACGGGCCGAAACGGGGCCCCGGCAATATCGGAAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGc < 2:4898779/150‑1 (MQ=25) ttGTGGGCGGGGCCTGGGGGCGCGAAGGGGCCGCAACGCGCCCCCGGAAATATCGGCAGCGACGCTGAGCCCCTCGGGGCGCTTCGCCCCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAAcggccgg < 2:4433055/150‑1 (MQ=25) gcgCGGCCTGGGGCGGCGAACGGGCCGCACCGCGCCCCCGGCAATAGCGGCCGCGACGCTGAGACCCTCGGGGCGCTGCGCCCCCCTTTCGCGACACACGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATgg < 2:4514748/148‑1 (MQ=255) cgcggcgTGGTGTCGCGACTGGGCCGAAACGGGGCCCCGGCAATATGGGCAGCGAAGCTGCGACCCTGGGGGGGCTTCGCACCCCATCCGCGACACACGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATggg < 2:507563/149‑1 (MQ=255) cgCGTCCTTGGTTCGCGAACGGGCCGCTTCGCGGCCCCGGCATTATCGGCTGCGAAGCTGCGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAATAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATggg < 2:8557108/149‑1 (MQ=25) aGCGGCCTTGGGTCGCGAACGGGCCGCAACGCGCCCCCGGCAATATCGGCAGCGAAGCTGACACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATggg < 2:2624496/150‑1 (MQ=37) cGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtc < 1:1698727‑M2/150‑67 (MQ=255) ccTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAc > 1:6713619/1‑150 (MQ=255) cTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAca > 2:8515670/1‑150 (MQ=255) gtgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacga < 1:7522639‑M2/150‑74 (MQ=255) gtgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagca > 1:5582737/1‑150 (MQ=255) tgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACAGAAGGCCGCTCCCACCAAAAGCCGAGCAGTTGTCAGGCCGACGGCCGGCTATGGGGAAAcagcag > 1:5926286/1‑150 (MQ=255) gggcgcgAATGGGCGGCACCGGGGCCCCGCAAATATCGGCAGCGCAGCTGTGACCCTTGGGGCGCTTCGCACCCCATGCGCGACACTGGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagcag < 2:7584320/147‑1 (MQ=255) gtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAgg > 1:4258250/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 2:1114946/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:1905819/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:2309369/1‑150 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:325311/1‑150 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactccc < 2:1829762‑M2/150‑79 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCg > 1:4156084/1‑150 (MQ=255) gAAAGGGCCGCAACGCGGCCCCGGAAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGAt < 2:6388007/150‑1 (MQ=255) gAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactccccg < 1:3868102‑M2/150‑81 (MQ=255) ccggggCCGCTTTGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATa > 1:1417468/4‑150 (MQ=255) ggggCCGCTTTGCGGCCCCGGCAATATCGGCAGCGAAGCAGAGACCCTAGGGGCGCTTCGCACCCCAATCGCGACACAAGGCCGCACCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGCAACAGCAGGTCGATaaa > 1:8534201/2‑150 (MQ=38) ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGc > 2:4931929/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGc > 1:3402663/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGGTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGc > 1:2125771/1‑150 (MQ=255) cGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCt > 2:8234123/1‑150 (MQ=255) cGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCt > 2:1024216/1‑150 (MQ=255) gCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTc > 1:7024601/1‑150 (MQ=255) cAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTcg > 1:2894228/1‑150 (MQ=255) aacgCGGCCCCGGCAATATCGGCAGCGATGCTGCGACCCTCGGGGCGCTTCGCACCCCTTGCGCGACACAAGCCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTcgg < 2:8345954/147‑1 (MQ=255) aaaGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTcgg > 2:3935946/1‑150 (MQ=255) cgggcccccGGCAATATCGGCCGCGACGCTGAGCCCCTGGGGGCGCTGCGCACCCCATGCGCCACACACGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTcggcg < 2:878549/145‑1 (MQ=255) aGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTcggcg > 2:7897155/1‑150 (MQ=255) gCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTcggcgg > 2:6581925/1‑150 (MQ=255) ccccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactccccgaacccgatctcgactatc > 1:1829762‑M2/1‑52 (MQ=255) ccccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaaaactgcaaaattttaacccgaccggcggcctggacatgtccgaacgactccccgaacccgatctcgccgatc < 2:8334541‑M2/150‑99 (MQ=255) cccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGc > 1:8202159/1‑150 (MQ=255) ccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCaa > 2:3017116/1‑100 (MQ=255) ccGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCt > 2:5436818/1‑150 (MQ=255) cGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTg > 2:1774881/1‑150 (MQ=255) ggCAATATCGGCCGCGAAGCTGAGACCCTCGGGGCGCTCCGCACCCCATCCGCGACACGCGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGc < 1:3798288/150‑1 (MQ=255) ggCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTCTGGGGACACAGCAGGTCGATAAACCGCGCGGCGGTGGGCTGc > 2:8315800/1‑150 (MQ=255) ggCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGc > 2:2542463/1‑150 (MQ=255) aaTATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGt > 2:3175399/1‑150 (MQ=255) aaTATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGt > 1:3449446/1‑150 (MQ=255) tatCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAACACGCTCGGCGGTGGGCTGCGGTTc > 1:7372302/1‑150 (MQ=255) tCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCAt > 2:8053775/1‑150 (MQ=255) gcGGCAGCGAAGCTGAGACCCTCGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCAt < 2:2815348/149‑1 (MQ=255) cGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATg > 2:775374/1‑150 (MQ=255) ggCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATgg > 1:6104020/1‑150 (MQ=255) ggCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATgg > 1:4793352/1‑150 (MQ=255) gAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTggcc > 1:454988/1‑150 (MQ=255) gAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTggcc > 2:4730146/1‑150 (MQ=255) tGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTggccaggcc > 1:2674939/1‑150 (MQ=255) gacccccTGGGGGCGCTCCCCCCCCCCTGCGCCACACACGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTggccaggcca < 2:36342/146‑1 (MQ=255) aCCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactccccgaacccgatctcgactatctcaaacgcgtgctgctggaaatgctcgc < 1:1072392‑M2/150‑127 (MQ=255) | GTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGCTCGGCGGTGGGCTGCGGTTCATGGTTGGCCAGGCCAGCA > NC_002947/1952689‑1952985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |