| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,092,827 | C→T | 7.3% | intergenic (+648/+270) | PP_1865 → / ← aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,092,827 | 0 | C | T | 7.3% | 777.1 / 38.3 | 289 | intergenic (+648/+270) | PP_1865/aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Reads supporting (aligned to +/- strand): ref base C (183/83); new base T (15/6); total (198/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Only 100 of 295 total aligned reads displayed.
GGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTT > NC_002947/2092678‑2092976 | ggaggTGACGGGCTTGGATGCCCGTCAAGCGCTGGGCCCCT‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGc < 2:2534418/150‑1 (MQ=21) ttGACGGGCATCCATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACg > 1:7846573/2‑150 (MQ=21) gTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACg > 1:1316770/1‑150 (MQ=34) tGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGa > 2:507514/1‑150 (MQ=34) tGACGGGCATCCATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGGGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGa > 1:6916416/1‑150 (MQ=255) tGACGGGCATCCATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGa > 2:3721294/1‑150 (MQ=21) aCGGGCATGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGAcc > 1:2524313/1‑150 (MQ=34) gggCATGGTTGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCaa < 2:3947131/150‑1 (MQ=21) gggCATGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCaa > 1:5699358/1‑150 (MQ=34) gggCATGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTGTTGGTTACTTTGGCCACGACCaa > 2:4658540/1‑150 (MQ=21) gggCATCCATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCaa > 1:4350218/1‑150 (MQ=21) cgcgctgcaggccccatcctggggcccagcgcttgacgggcatccatgcccgtcacctccctccgcaagcccAGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCa > 1:7216665‑M2/73‑150 (MQ=255) gCATGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGATCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAg < 1:1421603/150‑1 (MQ=11) gCATGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAg > 2:5268407/1‑150 (MQ=34) cATGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCGGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGt < 2:71664/150‑1 (MQ=11) cATGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGt > 1:4795099/1‑150 (MQ=34) tGGATGCCCGTCACGCGCGGGGCCCCT‑GGTTGGGGCCTGCCGCGCGGTCCTCCCGGGAGCAAGCCGGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTaa < 1:3038372/150‑1 (MQ=11) tGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAGTaa < 1:7949714/150‑1 (MQ=255) ggATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAAc > 2:625674/1‑150 (MQ=34) ggATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAAc > 2:2171237/1‑150 (MQ=34) gCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccgc > 1:2612120/1‑150 (MQ=34) ccGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg > 1:5499971/1‑150 (MQ=34) tCACGCGCTGGGCCCCT‑GGATGGGGCCTGCAGGGGGGTCCTCCGGGGAGCACGCCCGGTGTGTGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGTTGGTAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGaa < 2:4241246/150‑1 (MQ=11) gcgcTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGc > 2:4142099/1‑150 (MQ=34) cgcTGGGCCCCT‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGCGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCg < 2:5809015/150‑1 (MQ=21) tgaggCCCCATGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCgg > 2:6744098/4‑150 (MQ=255) aggCCCCA‑TCCTGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGaaa > 2:5454460/2‑150 (MQ=255) ggCCCCT‑GGTGGGGGCATGCCGGGGGGTCCGCCGGGTAGCACCCCGGTTGTGCGGGGCCCCCGGCGCTTTGCGTTGGGGCGGTTTGTTGGGAGCCGAGGTTTTTGGTTACTTTGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAg < 2:2347527/150‑1 (MQ=2) cccA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGACGGGCGGACAGGTg > 2:8423632/1‑150 (MQ=21) cccA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTg > 1:5234361/1‑150 (MQ=34) cccA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTg > 1:492280/1‑150 (MQ=34) cccA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTg > 2:3508041/1‑150 (MQ=34) cA‑GGCTGGGGCCTGCAGCGGGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCTACGGTTTTGGTTACTTTGGCCACGACAAAATTAACCCGCCGGAAGGGCGGAAAGGTGaa < 2:4947476/150‑1 (MQ=11) cA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGaa > 2:8369213/1‑150 (MQ=34) cA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGaa > 2:897050/1‑150 (MQ=34) gtgggggCCTGCCGCGGGGTCCTCCGGGGTGCACGCCGGGTGTGCGGGGACCCGGGCGCGTCGGGTGGGGGCGGTTTGTTGGGCGCCGAGGGTTTTGGTTAGTTGGGCCACGACAAATTTAACCCGCCGGAAGGGCGGAAAGGTGAATAg < 2:3374679/147‑1 (MQ=2) tccgggCCTGCAGCGCTGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAgg > 1:2790438/4‑150 (MQ=21) tGGGGCCCGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGgc > 2:163609/1‑150 (MQ=21) gggCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGgcgc > 1:2257532/1‑150 (MQ=34) ctgctgCGGGGTCCTCCGGTTACCACGCCCGTTGTGCGGGTCCCCGGGCGCGTAGGGTTGGGGCCGTATTATGGGTGCCGCCGGTTTTTGTTACTTTGGCAACGACAAATTAAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTAc < 2:8199100/150‑1 (MQ=2) tGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGACAGGTGAATAGGCGCCTACa > 2:8577819/1‑150 (MQ=37) tGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACa > 2:44622/1‑150 (MQ=37) gCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACAt > 1:8119352/1‑150 (MQ=37) aGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCg > 1:401286/1‑150 (MQ=37) gcgGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGtga > 1:7710580/1‑150 (MQ=37) tcctccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGtgaatga > 2:1910518/1‑150 (MQ=37) ctccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTgaatgaat > 1:8794132/1‑150 (MQ=37) tccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGaatgaatg > 1:843266/1‑150 (MQ=37) tccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGaatgaatg > 1:1110761/1‑150 (MQ=37) ccGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGACGGGCGGACAGGTGAATAGGCGCCTACATCGTGACTGAATGTc > 2:8077703/1‑150 (MQ=255) ccGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTc > 2:3032261/1‑150 (MQ=37) ccGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTc > 1:6556914/1‑150 (MQ=37) ggtaGCACGCCGGGGGTGTGGGGACCCGGGCGCGTTGCGTTGGGGCCGGTTGTTGGGAGCCGCCGGTTTTGGTTACTTTGGCCACGACCAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTa < 2:824879/147‑1 (MQ=11) gttgCACGCCGGGCGTGGGGGGACCCCGGAGCGTTGGTTTGGGGCGGTATGTTGGGAGCGGACGTTTTTGGTTACTTTGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTAc < 2:5953621/147‑1 (MQ=11) gAGCAAGCCGGGAGTGCGGGGCCCCCGGAGCGTTGGGTAGGGGCCGTATGTTGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACt < 2:7802691/150‑1 (MQ=11) aagcccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGAt > 2:2370393‑M2/7‑150 (MQ=255) aagcccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGAt > 2:6325591‑M2/7‑150 (MQ=255) aagcccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGAt > 1:6441853‑M2/7‑150 (MQ=255) gccgGGTGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGTTGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGc < 2:1377759‑M2/146‑1 (MQ=255) gcccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGc > 1:3555805‑M2/5‑150 (MQ=255) ccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGa > 1:3257759‑M2/3‑150 (MQ=255) ggtgggcggggACCCGGGCGCGTCGGGTGGGGGCGGTATGTTGGGCGCCTCGGTTTTTGGTTACTTTGGCCACGACAAACGTACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGaaa < 2:1132434/143‑1 (MQ=14) ggAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGaaa < 2:6492622/150‑1 (MQ=39) aGTGCGGGGACCCCTCAGCTTAGCTTTGGGCCCGTTTTTTGGTAGCCCACGGTTTTGTTTAATTTCCAAACCAAAAAACTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAgc < 2:1848819/150‑1 (MQ=9) aGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAgc > 2:6626556/1‑150 (MQ=39) gTGAGGGGACCCCGGTGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAgcg < 2:5726577/150‑1 (MQ=255) gTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAgcg > 2:3846313/1‑150 (MQ=39) gtggggACCCCGGCGCGTCGCGTAGGGGCCGGATGATGGGAGCCGCGGGTTTGGGTTACTTGGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGca < 2:6023907/148‑1 (MQ=14) gggACCCCGGTGCGTAGGTTTGGGGCCGTTTGTTGGGAGCCGAGGTTTTTGGTTACTTTGGCCACGCCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACaa < 2:8459873/150‑1 (MQ=14) gACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcc > 1:8581198/1‑150 (MQ=39) cccGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaa > 1:6664212/1‑150 (MQ=39) cccGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaa > 1:7764878/1‑150 (MQ=39) gCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaag > 1:2426080/1‑150 (MQ=255) ggATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAAGCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATTCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagccc > 2:1496224/1‑150 (MQ=255) tttgGGTGCCGACGTTTTTGGTTACTTTGCCCACGACAAATTAAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaa < 2:3982101/148‑1 (MQ=14) gatgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaa > 1:7521308/1‑150 (MQ=255) gatgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaa > 2:7590355/1‑150 (MQ=255) atgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaacg > 2:7457241/1‑148 (MQ=255) gAGCCGAGGTTTTTGGTTAGTTTGGCCACGACAAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagccca < 2:8492594/150‑1 (MQ=17) aGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaa > 2:3151011/1‑150 (MQ=255) ccGACGGTTTTGGTTACTTTGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaaa < 1:6470550/150‑1 (MQ=255) cGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaaag > 1:632848/1‑150 (MQ=255) gttgtttttTGTTTCTTTGTCCACTACCAATTTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATAGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACccaaaagcccaaaagcccaaaagcccaaaagcccaaaagc < 2:5166381/145‑1 (MQ=17) gACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACccaaaagcccaaaagcccaaaagcccaaaagcccaaaagc > 2:4451690/1‑150 (MQ=255) gACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACccaaaagcccaaaagcccaaaagcccaaaagcccaaaagc > 2:2312471/1‑150 (MQ=255) gTTTTGGTTATTTGGGCCTCGACAATTTTATCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGTATGTCTACTTGATGCGAAAGCGCACAACCCAAaagcccaaaagcccaaaagcccaaaagcccaaaagcccaa < 2:7710580/150‑1 (MQ=17) ttttGTTTAGTTTGGCCACGACAAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAagcccaaaagcccaaaagcccaaaagcccaaaagcccaaa < 2:4795099/150‑1 (MQ=255) ggTTACTTTGGTCGTGGCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCtt > 2:797639/1‑150 (MQ=255) gTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCttt > 2:2597587/1‑150 (MQ=255) ttccTTTGGCAACTACAAATGTACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa < 1:7093092/147‑1 (MQ=18) ttACTTTGGTCGTGGCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 1:5395054/1‑150 (MQ=255) ttACTTTGGTCGTGGCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 1:1679039/1‑150 (MQ=255) ttACTTTGGTCGTGGCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 2:2146195/1‑150 (MQ=255) ttACTTTGGTCGTGGCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 2:8708797/1‑150 (MQ=255) ttACTTTGGCAACTACCAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa < 2:2918109/150‑1 (MQ=255) tttGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAATCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcgc < 2:7116621/150‑1 (MQ=255) tGGCCACTACAAAATAACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCg < 1:3721294/150‑1 (MQ=18) tGGCCACGACCAAATTACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCg < 2:6916416/150‑1 (MQ=255) gCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGt > 1:2119674/1‑150 (MQ=255) ccACGACAAAATTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGtt < 2:1783148/150‑1 (MQ=255) | GGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTT > NC_002947/2092678‑2092976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |