| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,092,832 | A→G | 6.9% | intergenic (+653/+265) | PP_1865 → / ← aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,092,832 | 0 | A | G | 6.9% | 793.0 / 35.7 | 289 | intergenic (+653/+265) | PP_1865/aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Reads supporting (aligned to +/- strand): ref base A (181/86); new base G (14/6); total (195/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.90e-01 | |||||||||||
Only 100 of 303 total aligned reads displayed.
TGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTTCTGAT > NC_002947/2092683‑2092981 | tGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGTTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGa < 2:29410/150‑1 (MQ=21) gggCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCaa > 1:5699358/1‑150 (MQ=34) gggCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTGTTGGTTACTTTGGCCACGACCaa > 2:4658540/1‑150 (MQ=21) gCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGATCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGTCGTGGCCAAAg < 1:1421603/150‑1 (MQ=11) gCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAg > 1:7120391/1‑150 (MQ=34) tGGATGCCCGTCACGCGCGGGGCCCCTGGTTGGGGCCTGCCGCGCGGTCCTCCCGGGAGCAAGCCGGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTaa < 1:3038372/150‑1 (MQ=11) tGGAGGCCCGTCAAGCGCTGGGCCCCTGGATGGGGCCTGCTGCGCGGTCCTCCCGGGTGCAAGCCGGGTGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTaa < 1:2526567/150‑1 (MQ=11) ggATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAAc > 2:2170711/1‑150 (MQ=34) gCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccgc > 1:2612120/1‑150 (MQ=34) cccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccgcc > 2:3783255/1‑150 (MQ=34) ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg > 2:1840633/1‑150 (MQ=34) ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg > 1:5499282/1‑150 (MQ=34) ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACccgccg > 2:6262536/1‑150 (MQ=34) cGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCgg > 1:8716507/1‑150 (MQ=34) gTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGa > 2:5123772/1‑150 (MQ=34) tCACGCGCTGGGCCCCTGGATGGGGCCTGCAGGGGGGTCCTCCGGGGAGCACGCCCGGTGTGTGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGTTGGTAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGaa < 2:4241246/150‑1 (MQ=11) aaGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAgg > 2:7846581/1‑150 (MQ=34) gcgcTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGc > 1:2360568/1‑150 (MQ=34) gcgcTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGc > 2:4142099/1‑150 (MQ=34) gcgcTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGc > 2:2103846/1‑150 (MQ=34) gggCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGaaa > 2:1875384/1‑150 (MQ=34) cccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTg > 1:4872824/1‑150 (MQ=34) cccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTg > 2:8423752/1‑150 (MQ=34) ccAGGATGGGGCCTGCAGCGCGGTCCTCCGGGTAGCATGCCTGGAGTGAGGGTACCCGGGAGGTTAGGGTAGGGGCGGTTTGATGGTAGCCGACGGTTTTGTTTACTTTGGCCAGGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGa < 2:5726522/150‑1 (MQ=11) cggtgggggCCTGCCGGGGGGGCCGCCCGGGAGCATGCCGGTAGGGCGGGGACCCGGGAGGGTAGCGTAGGGGCCGGATTCTGGGAGCCGCGGGTTTTGGTTACTTGGGCCACGACCAAATTAACCCGCCGGAAGGGCGGAAAGGTGAAt < 2:4890494/145‑1 (MQ=2) aGGTTGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGTGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAAt < 2:5807852/150‑1 (MQ=21) tccgggCCTGCAGCGCTGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAgg > 1:2790438/4‑150 (MQ=21) tccgggCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAgg > 1:6427359/4‑150 (MQ=21) tGGGGCCTGCTGCGGGGTCCTCCGGGGAGCACGCCGGGTGTGCGGGTACCCGGGTGCTTTGGGTTGGGGGGGTATTTTGGTAGCCTAGGGTTTTGTTTAGTTGGGCCACGACCAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGgc < 2:8469100/150‑1 (MQ=2) gggggCCTGCAGCGCGGGCCTCCGGGGAGCACGCCGGGTGTGTGGGGACCCGGGAGCGTCGGGTCGGGGCGGGATGATGGGAGCCGCCGGTTTTGGTTACTTTGGCCACGACCAAAGTACCCCGCCGGAAGGGCGGAAAGGTGAATAGgc < 2:6739918/149‑1 (MQ=11) gCCTGCTGCGGGGTCCGCCGGGTTGCAAGCCGGGTGTGTGGGGACCCCGGTGGGTTGCGTTGGGGCGGGTTGTTGGGAGCCGAGGGTTTTGGTTAGTTTGGCCACGACCAATGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCt < 2:5244573/150‑1 (MQ=11) gCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCt > 1:4690169/1‑150 (MQ=34) gCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCt > 2:8110572/1‑150 (MQ=34) gCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCt > 2:1547461/1‑150 (MQ=34) tGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACa > 2:44622/1‑150 (MQ=37) tGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACa > 2:8577882/1‑150 (MQ=37) gCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACAt > 1:8118937/1‑150 (MQ=37) aGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCg > 1:401286/1‑150 (MQ=37) gcgGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGACGGGCGGAAAGGTGAATAGGCGCCTACATCGtga > 1:5018277/1‑150 (MQ=37) cgGTCCTCCGGGGAGCAAGCCCGGTGTGTGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGtgaa < 2:5018277/150‑1 (MQ=255) cgGTCCTCCCGGGAGCAAGCCGGGAGTGGGGGGACCCGGGCGCGTAGGGTTGGGGCGGGTTGAGGGGAGCCGAGGGTTTTGGTTACTTGGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGtgaa < 2:5376247/150‑1 (MQ=11) cgGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATCGGCGCCTACATCGtgaa > 2:8502822/1‑150 (MQ=37) tccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGaatgaatg > 1:1110761/1‑150 (MQ=37) tccCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGaatgaatg > 2:1404055/1‑150 (MQ=37) ccGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTc > 2:8392976/1‑150 (MQ=37) ccGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTc > 2:2355254/1‑150 (MQ=37) aGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACtt > 2:7649545/1‑150 (MQ=37) catgcccGGTGTGTGGGGACCCGGGTGCGTTGCTTTGGGGCCGGATGTTGGGAGCCGAGGGTTTTGGTTACTTGGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGa < 2:7008686‑M2/143‑1 (MQ=255) aagcccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGAt > 2:3867072‑M2/7‑150 (MQ=255) agcccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATg > 1:8569683‑M2/6‑150 (MQ=255) gcccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGc > 1:3555805‑M2/5‑150 (MQ=255) ccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGa > 1:6623026‑M2/3‑150 (MQ=255) ccGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGa > 1:3257759‑M2/3‑150 (MQ=255) ggtgtgtGGGGACCCGGGCGGGTTGCTTGGGGGCCGTTTGTTGGGAGCCGAGGTTTTTGTTTACTTTGGCAACGACCAAATTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGaaa < 2:2498574/147‑1 (MQ=14) ggAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGaaa < 2:6507957/150‑1 (MQ=39) ccGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaa > 1:7866865/1‑150 (MQ=39) cGGGGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaa > 1:2496685/1‑150 (MQ=255) cGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaa > 2:7477726/1‑150 (MQ=40) gtagcgtagGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaa > 1:925806/1‑150 (MQ=255) tgcgttgGGGCGGGATGTTGGGAGCCGACGTTTTGGGTTACTTTGGCCACGACCAATTTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaa < 1:6480118/149‑1 (MQ=14) gtagGGGCCGTATTTTGGTAGCCGACGTTTTTGTTTAATTTGGCCACGACAAAATTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcc < 2:8337218/150‑1 (MQ=14) gggCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaa > 2:5965478/1‑150 (MQ=255) tttgGGTGCCGACGTTTTTGGTTACTTTGCCCACGACAAATTAAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaa < 2:3982101/148‑1 (MQ=14) gatgGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaa > 1:705780/1‑150 (MQ=255) gggAGCCTAGTGTTTTGGTTACTTGGGCAACTACAAATTTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcc < 2:230381/150‑1 (MQ=17) gggAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcc > 2:1734503/1‑150 (MQ=255) gggAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcc > 2:6378839/1‑150 (MQ=255) gCCGAGGGTTTGGTTTACTTTGGCAACGACAAAATTAACCCGCCGGAAGGGCGGAAAGGTGAATCGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaa < 2:773768/150‑1 (MQ=17) gCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaa < 2:8210960/150‑1 (MQ=255) gCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaa > 1:194942/1‑150 (MQ=255) ccgtgggTTTTGGTTACTTTGGCCACGACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaaa < 2:3521389/145‑1 (MQ=255) ctaggtttttGTTTATTTTGGCAACCACAAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaaag < 1:6900034/144‑1 (MQ=17) cGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAAcccaaaagcccaaaagcccaaaagcccaaaagcccaaaag > 1:632848/1‑150 (MQ=255) gACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACccaaaagcccaaaagcccaaaagcccaaaagcccaaaagc > 1:5330703/1‑150 (MQ=255) gACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACccaaaagcccaaaagcccaaaagcccaaaagcccaaaagc > 2:4451690/1‑150 (MQ=255) gtttttGTTTTCTTTGCCCCCTACAAATTTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAaaagcccaaaagcccaaaagcccaaaagcccaaaagccca < 1:8138097/148‑1 (MQ=17) ggTTTTCGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAaaagcccaaaagcccaaaagcccaaaagcccaaaagccca > 2:3328102/1‑150 (MQ=255) ttttGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGACGGGCGGAAAGGTGACTAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAagcccaaaagcccaaaagcccaaaagcccaaaagcccaaa > 2:7127001/1‑150 (MQ=255) ttttGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAagcccaaaagcccaaaagcccaaaagcccaaaagcccaaa > 2:2340510/1‑150 (MQ=255) ttttGGTTACTTTGGCCACGAAAAATTTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAagcccaaaagcccaaaagcccaaaagcccaaaagcccaaa < 1:1608281/150‑1 (MQ=255) tGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCt < 2:8072038/150‑1 (MQ=255) gTTACTTTGGTCGTGGCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCttt > 2:3091362/1‑150 (MQ=255) gTTACTTTGGTCGTGGCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCttt > 1:7388361/1‑150 (MQ=255) gTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCttt > 1:136752/1‑150 (MQ=255) gTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCttt > 2:2597587/1‑150 (MQ=255) gTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCttt > 1:7534073/1‑150 (MQ=255) ttACTTTGGTCGTGGCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 2:3503569/1‑150 (MQ=255) ttACTTTGGTCGTGGCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa > 1:64476/1‑150 (MQ=255) ttACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAACAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa < 2:123106/150‑1 (MQ=255) ttACTTTGGCCACCACAAAATTACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa < 1:771869/150‑1 (MQ=255) ttACTTTGCCCACGACAAAATAACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTa < 1:2171123/150‑1 (MQ=18) cTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAgcg > 2:7324243/1‑150 (MQ=255) tGGCCACTACAAAATAACCCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCg < 1:3721294/150‑1 (MQ=18) tGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCg < 2:896703/150‑1 (MQ=255) gCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGt > 2:6054662/1‑150 (MQ=255) cACGACCGAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTTc > 2:6801990/1‑150 (MQ=255) cACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTTc < 2:5842873/150‑1 (MQ=255) cACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAAGGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTTc < 2:8716507/150‑1 (MQ=255) aCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTTCTGAt < 2:2845417/150‑1 (MQ=255) aCCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTTCTGAt > 1:4185356/1‑150 (MQ=255) | TGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGTGAGGGGACCCCGGAGCGTAGCGTAGGGGCCGGATGATGGGAGCCGACGGTTTTGGTTACTTTGGCCACGACCAAAGTAACCCGCCGGAAGGGCGGAAAGGTGAATAGGCGCCTACATCGTGAATGAATGTCTACTTGATGCGAAAGCGCACAACCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAAGCCCAAAGCTTTAGCGCCGGTTCTGAT > NC_002947/2092683‑2092981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |