Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,100,181 G→C 6.9% intergenic (‑240/+77) htpX ← / ← alaA protease HtpX/glutamate‑pyruvate aminotransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,100,1810GC 6.9% 866.9 / 40.2 261intergenic (‑240/+77)htpX/alaAprotease HtpX/glutamate‑pyruvate aminotransferase
Reads supporting (aligned to +/- strand):  ref base G (115/128);  new base C (5/13);  total (120/141)
Fisher's exact test for biased strand distribution p-value = 1.42e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01

Only 100 of 287 total aligned reads displayed.

AACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAG  >  NC_002947/2100032‑2100330
                                                                                                                                                     |                                                                                                                                                       
aaCTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCcgcg                                                                                                                                                         >  2:7545584/1‑150 (MQ=255)
  cTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCcgcgcg                                                                                                                                                       >  1:2622002/1‑150 (MQ=255)
  cTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCcgcgcg                                                                                                                                                       >  1:2622815/1‑150 (MQ=255)
     tgtACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCgcgggc                                                                                                                                                    >  2:8777616/1‑150 (MQ=255)
      gtACGGCGGAGTCTGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGAGGTAAGACACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCgcgggcg                                                                                                                                                   <  2:7961631/150‑1 (MQ=255)
      gtACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGGGGCGC‑‑‑‑‑AGATCGAGCGCCGCCCGCGCGGCGCt                                                                                                                                              <  1:4486392/150‑1 (MQ=38)
      gtACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGGGGCGC‑‑‑‑‑AGATCGAGCGCCGCCCGCGCGGCGCt                                                                                                                                              <  2:3066670/150‑1 (MQ=38)
        aCGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGggcggc                                                                                                                                                 <  2:4907358/150‑1 (MQ=255)
        aCGGCGGAGTATGGCAGAGGATGGCGTGGGGGCGGTGGGATAGAGCGTTGCAGGATGTAAGATACCTTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGggcggc                                                                                                                                                 <  2:5470130/150‑1 (MQ=255)
          ggcggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGgcgc                                                                                                                                               >  1:4031561/1‑150 (MQ=255)
           gcggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCt                                                                                                                                              <  2:8560856/150‑1 (MQ=255)
            cggAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTc                                                                                                                                             >  2:396491/1‑150 (MQ=255)
              gAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGa                                                                                                                                           <  1:2778644/150‑1 (MQ=255)
              gAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGa                                                                                                                                           <  1:8584261/150‑1 (MQ=255)
              gAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGa                                                                                                                                           <  2:5283022/150‑1 (MQ=255)
                 tATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGATGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCt                                                                                                                                        <  2:6515931/150‑1 (MQ=255)
                     gCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑gc‑gc                                                                                                                                  <  2:2991999/150‑1 (MQ=255)
                      cAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑Gcc                                                                                                                                 >  2:1403828/1‑150 (MQ=255)
                         agGATGGGGTGGGGGCTGTGGGATAGAGCGTTGCTGTTTGTAAGAAACTTTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCATGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCcca                                                                                                                              <  1:4539204/150‑1 (MQ=38)
                         agGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCcca                                                                                                                              >  1:7006437/1‑150 (MQ=255)
                         agGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCcca                                                                                                                              >  1:6256814/1‑150 (MQ=255)
                            aTGGCGTGGGGGCTGTGGGATAGCGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCccacca                                                                                                                           <  1:6016241/150‑1 (MQ=255)
                             tGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCccaccac                                                                                                                          <  1:3410987/150‑1 (MQ=255)
                                    ggggCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCAccccc                                                                                                                   >  1:1374471/1‑150 (MQ=255)
                                    ggggCGGGGGGATAGAGCGTTGCAGGATGTAAGCAACAGTCGGCTTGGGGGCTGCGTCCAGGCCGCTGGGTGTTTGCCGCACGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCAccccc                                                                                                                   <  2:5663455/150‑1 (MQ=38)
                                          gtgGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCCCCACCACCCCCgcggcg                                                                                                             >  1:8393195/1‑150 (MQ=255)
                                           tgGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCGCCACCACCACCCCCGCGTCGa                                                                                                            >  1:3410216/1‑150 (MQ=255)
                                           tgGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGa                                                                                                            >  2:4924188/1‑150 (MQ=255)
                                            gggATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGaa                                                                                                           <  2:7749695/150‑1 (MQ=255)
                                                  gagCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCtctc                                                                                                     <  2:7476020/150‑1 (MQ=255)
                                                      gTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCCCCGCGAACCTCTCGTAg                                                                                                 >  2:3645297/1‑150 (MQ=255)
                                                           aGGTTGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGTGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCACGTAGccccc                                                                                            >  1:3160569/1‑150 (MQ=255)
                                                              aTGTAATAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGgc                                                                                         <  1:5500523/150‑1 (MQ=255)
                                                                   aGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGTACCTCTGGTAGCCCCCGGGGcccc                                                                                    >  2:4673423/1‑150 (MQ=255)
                                                                   aGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGcccc                                                                                    >  2:5038207/1‑150 (MQ=255)
                                                                   aGAAACATTCCGCTTCGGGGCAGAGACAAGGCCGCTGGGTCATTGCCGCAAGTGCTCTGGGGACTGTCAGATCGAGCGCCGCGCGGGCCGCGCTCGATCT‑GC‑CCCCCACCACCAACCCCGCCTCCAACCACTAGAATCCCCCCgcccacc                                                                                    >  2:7173485/1‑145 (MQ=255)
                                                                    gAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGccccc                                                                                   >  1:5553124/1‑150 (MQ=255)
                                                                       aCATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTc                                                                                <  1:7871011/150‑1 (MQ=255)
                                                                          ttCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGCACCTCTCGTAGCCCCCGGCGCCCCCGTCGaa                                                                             >  2:6785485/1‑150 (MQ=255)
                                                                          ttCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGaa                                                                             <  2:3287570/150‑1 (MQ=255)
                                                                          ttCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGaa                                                                             >  2:1200193/1‑150 (MQ=255)
                                                                           tCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAAc                                                                            <  1:5192889/150‑1 (MQ=255)
                                                                              gCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCt                                                                         >  2:625657/1‑150 (MQ=255)
                                                                              gCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCt                                                                         <  2:293908/150‑1 (MQ=255)
                                                                                ttGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTAc                                                                       >  2:2008698/1‑150 (MQ=255)
                                                                                 tGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACt                                                                      <  2:1607076/150‑1 (MQ=255)
                                                                                    gggCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCg                                                                   >  2:6407650/1‑150 (MQ=255)
                                                                                        tGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCAACAACCCCGCGTCGAAACGATCGTAGCCCCCGGCGCCCCCGTCGTACCCGACAGCGAATa                                                               >  1:2988216/1‑150 (MQ=38)
                                                                                           gTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAAcc                                                            <  1:2887156/150‑1 (MQ=255)
                                                                                            tCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCAACTGCGAATAAccc                                                           >  2:2495714/1‑150 (MQ=255)
                                                                                            tCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCACTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACAGCGAATAAccc                                                           >  2:3496954/1‑150 (MQ=255)
                                                                                               aGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTc                                                        <  1:650883/150‑1 (MQ=255)
                                                                                                ggCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCa                                                       <  2:1506811/150‑1 (MQ=255)
                                                                                                ggCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCa                                                       <  1:7138351/150‑1 (MQ=255)
                                                                                                ggCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCa                                                       <  2:1970909/150‑1 (MQ=255)
                                                                                                ggCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCa                                                       <  1:8765120/150‑1 (MQ=255)
                                                                                                ggCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCCCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCa                                                       >  1:851857/1‑150 (MQ=255)
                                                                                                ggCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCACGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCa                                                       <  1:1529954/150‑1 (MQ=255)
                                                                                                 gCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCCCGGCGCACCACACCGAGCCCCCCGCCCCCCCCGCCCACCCCACAGCGCAAAACCCATccc                                                      >  1:7533482/1‑148 (MQ=21)
                                                                                                   cGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGCACCCGACGGCGAAAAACCCTTCACGa                                                    >  2:321244/1‑150 (MQ=39)
                                                                                                     cTGGGTGTTTTCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGaaa                                                  <  2:2434225/150‑1 (MQ=255)
                                                                                                        ggTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTg                                               <  2:6681074/150‑1 (MQ=255)
                                                                                                         gtgtTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGc                                              <  2:1912232/150‑1 (MQ=255)
                                                                                                         gtgtTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGc                                              <  2:7086915/150‑1 (MQ=255)
                                                                                                         gtgtTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGc                                              <  2:1017582/150‑1 (MQ=255)
                                                                                                          tgtTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCCCCACCCCCCCCTCGGACCACACGTAGCCCCCCGCGCCCCCCGCCAACCCCACAGCGCAAAACCCATCAGGAAAATGcc                                             >  1:536031/1‑150 (MQ=25)
                                                                                                            tttGCCGCAAGTGGTGTGGTGCCTGTGATATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCAACCCCGCCTCGAACCTCTCGTAGCCCCCGCCGCCCCCGTCGAACCCTACTGCGAATAACCCATCAGGAAATTGACGa                                           >  2:6719230/1‑150 (MQ=39)
                                                                                                            tttGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCGCTCGTAGCCCCCCGCGCCCCCGTCGAACCCGACAGCGAAAAACCCTTCAGGAAATTGCCGa                                           >  1:5065819/1‑150 (MQ=39)
                                                                                                              tGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATc                                         <  2:1869161/150‑1 (MQ=255)
                                                                                                                ccGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGTCGCCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCg                                       <  1:3707232/150‑1 (MQ=255)
                                                                                                                ccGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCCGCGCCCCCGTCGAACCCGACTGCGAATAACCCTTCAGGAAATTGCCGATCCg                                       >  1:3243629/1‑150 (MQ=255)
                                                                                                                 cGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCCTCGAACCCGACTGCGAATAAACCATCAGGAAAATGCCGATCCgg                                      >  1:2440059/1‑150 (MQ=39)
                                                                                                                  gCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAAAAACCCATCAGGAAATTGCCGATCCGGc                                     >  1:5861424/1‑150 (MQ=255)
                                                                                                                   cAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑CCCCCACCACCCCCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGcc                                    >  2:2345836/1‑150 (MQ=255)
                                                                                                                         gtgtggtgCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGc                              <  1:1744515/150‑1 (MQ=255)
                                                                                                                         gtgtggtgCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGc                              <  1:7148382/150‑1 (MQ=255)
                                                                                                                         gtgtggtgCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGc                              <  2:6164377/150‑1 (MQ=255)
                                                                                                                            tggtgCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGc                           <  1:396513/150‑1 (MQ=255)
                                                                                                                                gCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTcc                       <  2:5582041/150‑1 (MQ=255)
                                                                                                                                gCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACAGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTcc                       >  2:6344529/1‑150 (MQ=255)
                                                                                                                                 ccTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCa                      <  1:1234270/150‑1 (MQ=255)
                                                                                                                                  cTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAg                     <  1:6294107/150‑1 (MQ=255)
                                                                                                                                   tgtgAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAgg                    <  1:2653190/150‑1 (MQ=255)
                                                                                                                                   tgtgAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCACTCGTAGCCCCCGGCGCCCCCGTCGAACCCAACTGCGAATAACCCGTCAGGAAAATGCCGATCCGGCCAAATGCCGCTTCCAgg                    >  2:4362691/1‑150 (MQ=39)
                                                                                                                                     tgAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCATCAGGAAAATGCCGATCCGGCCAAATGCCGCTTCCAGGTc                  >  2:6964088/1‑150 (MQ=255)
                                                                                                                                      gagaTCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCCCCCCCCCGGCGAACCGCGCGTAGCCCCCGGCGCCCCCCTCGAACCCTACGGCGCATAAACCATCAGGAAAATGCCGATCCCGCCAAAAGCCGCGTCCACGTcc                 >  1:5330840/1‑149 (MQ=255)
                                                                                                                                       agaTCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCAt                <  2:8371185/150‑1 (MQ=255)
                                                                                                                                       agaTCGAGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCACCACACCACTCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTc                  >  1:4935829/1‑150 (MQ=25)
                                                                                                                                        gaTCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATc               <  2:5977591/150‑1 (MQ=255)
                                                                                                                                        gaTCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATc               <  1:7336256/150‑1 (MQ=255)
                                                                                                                                          ttgAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCa             >  2:2122962/3‑150 (MQ=255)
                                                                                                                                          tCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCCCCCCCCTCCAACCCAACTGCGCAAAAACCATAAGGAAAATGCCGATACCGCCAAATTCCGCGTCCAGGTCaaaca             >  1:8227431/1‑146 (MQ=255)
                                                                                                                                          tCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGGCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGCACCCGACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCa             >  1:817476/1‑150 (MQ=255)
                                                                                                                                           cGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCAc            <  1:6676936/150‑1 (MQ=255)
                                                                                                                                             aGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGGCGGACCTCTGGTAGCCCCCGGCGCCCCCCTCGAACCCAACAGCGAATAAACCATCAGGAAAATTCCGAAACCGCCAAATTCCGCGTCCAGGTCAACCAccc          >  2:4228610/1‑150 (MQ=255)
                                                                                                                                             aGCGCCGCCCGCGCGGCGCTCGATCTCACAGGCACCACACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCAc            >  1:2223733/1‑150 (MQ=37)
                                                                                                                                             aGCGCCGCCCGCGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCACTCCTACCCCCCCGCGCCCCCCTCGAACCCAACACCCAAAAACCCGACAGGAAAATGCCGATCCGGCCAATTGCCCCGTCCAGGTCAACCAccc          >  1:1851293/1‑150 (MQ=255)
                                                                                                                                              gcgcCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCGTCAGGCAAATGCCGATCCGGCCAATTGCCGCTTCCCGGTCATCCACCcg         >  2:8275884/1‑150 (MQ=255)
                                                                                                                                              gcgcCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGGCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGCACCCGACTGCGAATAACCCGTCAGGCAATTGCCGATCCGGCCCATTGCCGCGTCCAGGTCATCCACCcg         >  1:540271/1‑150 (MQ=255)
                                                                                                                                                gccgcGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCcgcg       >  2:8203932/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                       
AACTGTGTACGGCGGAGTATGGCAGAGGATGGCGTGGGGGCTGTGGGATAGAGCGTTGCAGGATGTAAGAAACATTCGGCTTGGGGGCTGCGTCAAGGCCGCTGGGTGTTTGCCGCAAGTGGTGTGGTGCCTGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCT‑GC‑GCCCCACCACCACCCCCGCGTCGAACCTCTCGTAGCCCCCGGCGCCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAG  >  NC_002947/2100032‑2100330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑