| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,171,636 | T→A | 6.0% | intergenic (‑488/‑293) | PP_5483 ← / → PP_1921 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,171,636 | 0 | T | A | 6.0% | 1251.0 / 42.3 | 380 | intergenic (‑488/‑293) | PP_5483/PP_1921 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (142/214); new base A (11/12); total (153/227) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 386 total aligned reads displayed.
GCACTTTTTTCCCCGGGTGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAG > NC_002947/2171487‑2171785 | gCACTTTTTTCCCCGGGGGAGCATTCAGTTTTTAGCTGGCATTGGCGGGTGATTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCTGAGGGTTTAAGGATGGCCGTTGGCCATTATGTGAAACGACCCGCTCCt < 1:3691009/150‑1 (MQ=255) cACTTTTTTCCCCGGGTGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGGTGGCCATTATGTGAAACGACCCGCTCCTg > 2:5744357/1‑150 (MQ=255) aCTTTTTTCCCCGGGTGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTgg > 1:7152166/1‑150 (MQ=255) aCTTTTTTCCCCGGGTGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTgg > 2:4932781/1‑150 (MQ=255) ttCCCCGGGTGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCggg < 2:4281636/150‑1 (MQ=255) tCCCCGGGTGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGga < 2:7247351/150‑1 (MQ=255) ccccGGGTGAGTATGCAGTGATTAGCGGGCACTGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGAGCGCCGTTGGCCATTATGTGAAACGACCCGCTCCAGGAGCgggtc < 1:1647831/150‑3 (MQ=255) ccccGGGTGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGgat < 2:731226/150‑1 (MQ=255) ccccGGGTGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCAGGAGCgggtc < 2:2417063/150‑3 (MQ=255) ccGGGTGAGCATTCAGTGATTAGCTGGCATTGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACGCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCAGGAGCgggtcgt < 1:1482775/150‑5 (MQ=255) ccGGGTGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGgatga > 2:6411135/1‑150 (MQ=255) cGGGTGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCAGGAGCgggtcgtt < 2:1697354/150‑6 (MQ=255) gggTGAGCATTCAGTGATTAGCTGGAAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGTTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATc < 2:896554/150‑1 (MQ=255) tGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGACACGACCCGCTCCTGGAGCGGGATGATCCGa < 2:1436346/150‑1 (MQ=255) gAGCATTCAGTGATTAGCTGTCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAg < 2:1193186/150‑1 (MQ=255) aGCATTCAGTGTTTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAgg < 1:1300181/150‑1 (MQ=255) aGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAgg < 1:2556881/150‑1 (MQ=255) aGCATTAAGTTATTAGCTGGCATTGGCGGGTTAGTTGACGTAATCTCCCGCGATCAGAAAGTTACTCTCAGCAACATATTGCAGAGGGTTTAAGTATCGCCGTTGGCATTTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAgg < 1:7354058/150‑1 (MQ=255) cAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGtt > 2:5925986/1‑150 (MQ=255) cAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGtt < 2:3759533/150‑1 (MQ=255) gTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTgg < 1:496193/150‑1 (MQ=255) tGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTggg < 1:2121072/150‑1 (MQ=255) aTTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGgt > 1:3276988/1‑150 (MQ=255) ttAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGgtg > 1:6522674/1‑150 (MQ=255) aGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTCTTGCAGAGGGTTTAAGGATCGCCGGTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTc > 2:5291741/1‑150 (MQ=255) aGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTc < 1:4157810/150‑1 (MQ=255) gCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTc > 2:3701332/1‑149 (MQ=255) cTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGc > 2:3892919/1‑150 (MQ=255) cTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGc < 2:1900231/150‑1 (MQ=255) aaTGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGtt < 2:1591478/150‑1 (MQ=255) aaTGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGtt < 1:5100627/150‑1 (MQ=255) tGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGTTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGa < 1:3654823/150‑1 (MQ=255) tGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGa < 2:7641777/150‑1 (MQ=255) tGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGa < 2:4351118/150‑1 (MQ=255) cggCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGa < 2:8510373/149‑1 (MQ=255) gCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGt < 1:1008018/150‑1 (MQ=255) tGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGc > 2:6515411/1‑150 (MQ=255) gTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTCTTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCGTGGCGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCtca > 1:35957/1‑150 (MQ=255) ttGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGAAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCtcaa > 1:8328975/1‑150 (MQ=255) gTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAAc < 2:5360434/150‑1 (MQ=255) cTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTggaagcc < 1:6380829/150‑6 (MQ=255) tCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCa > 2:449610/1‑150 (MQ=255) cGATCAGAAAGTTACTCGCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAg < 1:797037/150‑1 (MQ=255) tCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAATCGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGtt > 1:1863026/1‑150 (MQ=255) tCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGtt < 1:8077395/150‑1 (MQ=255) cAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTg < 2:7514144/150‑1 (MQ=255) cAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTg > 2:3993620/1‑150 (MQ=255) gAACGTTACCCTCCGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCa < 1:4407716/150‑1 (MQ=255) gAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCa < 2:3525755/150‑1 (MQ=255) aGTGACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGAAGCCAGGTTgattga < 2:7859444/150‑6 (MQ=255) tctcAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagg < 1:6131095/150‑1 (MQ=255) tctcAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagg > 1:6662749/1‑150 (MQ=255) tctcAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCAGTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagg < 2:8411653/150‑1 (MQ=255) tcAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtaggga < 2:8157535/150‑1 (MQ=255) tcAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtaggga > 2:6987980/1‑150 (MQ=255) tcAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtaggga > 1:1530757/1‑150 (MQ=255) tcAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTGGGGGTGTCGCTGGTTGAGTGAAGCTCAATCACCCTGGCTTCCAGGTTGCAGGTCgtaggga > 2:7386036/1‑150 (MQ=255) aGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTggg < 1:3004197/90‑1 (MQ=255) aGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTggg > 2:3004197/1‑90 (MQ=255) cAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagggagtag < 1:1126404/150‑1 (MQ=255) ccTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagggagtaggga > 1:3883526/1‑150 (MQ=255) cTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagggagtagggag > 2:4768381/1‑150 (MQ=255) ggCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagggagtagggagtagg < 1:7587905/149‑1 (MQ=255) cAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagggagtagggagtaggga > 2:2862672/1‑150 (MQ=255) agGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagggagtagggagtagggagta < 1:69747/150‑1 (MQ=255) gggTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagggagtagggagtagggagtag < 1:576003/150‑1 (MQ=255) gttttAAGGTTCGCCTTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGATTCCAGGTTGCAGGTCgtagggagtagggagtagggagtatg < 1:5676534/148‑3 (MQ=255) ggTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagggagtagggagtagggagtagg < 2:6206779/150‑1 (MQ=255) ggTTTAAGGATCGCCGTTGGCCATTAAGTGACACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagggagtagggagtagggagtagg < 1:3807928/150‑1 (MQ=255) tttAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCgtagggagtagggagtagggagtaggga > 1:8432720/1‑150 (MQ=255) gATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGagtagggagtagggagtagggagtaggg > 1:8720427/1‑150 (MQ=255) ccGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAgg > 2:3170413/1‑150 (MQ=255) ccGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAgg < 1:3731628/150‑1 (MQ=255) ccGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAgg > 1:7734856/1‑150 (MQ=255) gTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGga < 1:2891564/150‑1 (MQ=255) gTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGga < 2:8644458/150‑1 (MQ=255) tGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGgaga < 2:2051695/150‑1 (MQ=255) tGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGgaga < 1:4616574/150‑1 (MQ=255) gggCCAGTATGTGAAACGACCCGCTCCGGGAGCGGGAGGCTCCGAGGGCTGGGGGGGTGGCGCTGGTTGAGTGACGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGgaga < 2:7074018/149‑1 (MQ=255) gCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGt > 2:7710718/1‑150 (MQ=255) gCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGt > 2:3268491/1‑150 (MQ=255) cATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTGGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTCGGGAGTAGGGAGTAGGGCGTAGGGGCAGGGAGAGTCg > 2:5158231/1‑150 (MQ=255) ttATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGgc > 2:2129536/1‑150 (MQ=255) gtgAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCgg < 1:57983/150‑1 (MQ=255) gAAACGACCCGCTCCTGGAGCGGGATGATCGGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGt > 1:2243885/1‑150 (MQ=255) aaaCGACCCGCTCCTGGAGCGGGTTGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTg > 1:2757762/1‑150 (MQ=255) aaCGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGc > 1:5900643/1‑150 (MQ=255) aaCGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGc < 1:3305795/150‑1 (MQ=255) catcccGCTCCAGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAATCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAg > 2:2608240/4‑150 (MQ=255) catcccGCTCCAGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGGGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAg > 1:6316163/4‑150 (MQ=255) tcccGCTCCAGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGAt > 1:4786535/2‑150 (MQ=255) tcccGCTCCAGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGAt > 1:5009301/2‑150 (MQ=255) aCCCGCTCCTGGAGCGGGATGATCCGAGGGCGGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGGAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGAt > 2:2303600/1‑150 (MQ=255) cccGCTCCAGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGGAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGAtt > 1:5524179/1‑150 (MQ=255) ccGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTc < 1:4520168/150‑1 (MQ=255) tCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTc < 1:978005/150‑1 (MQ=255) cTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGa < 2:6637694/150‑1 (MQ=255) cTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGa < 1:3439934/150‑1 (MQ=255) cTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGa < 2:3302263/150‑1 (MQ=255) tGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAg < 1:178187/150‑1 (MQ=255) | GCACTTTTTTCCCCGGGTGAGCATTCAGTGATTAGCTGGCAATGGCGGGTGAGTTGACGTCATCTCCCTCGATCAGAAAGTTACTCTCAGCAACCTATTGCAGAGGGTTTAAGGATCGCCGTTGGCCATTATGTGAAACGACCCGCTCCTGGAGCGGGATGATCCGAGGGCTGTTGGGGTGTCGCTGGTTGAGTGAAGCTCAATCAACCTGGCTTCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAG > NC_002947/2171487‑2171785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |