| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,246,295 | G→A | 11.3% | intergenic (+50/‑231) | gltX → / → PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,246,295 | 0 | G | A | 11.3% | 349.8 / 29.5 | 134 | intergenic (+50/‑231) | gltX/PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Reads supporting (aligned to +/- strand): ref base G (40/76); new base A (10/5); total (51/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.28e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.76e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
CCTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAAC > NC_002947/2246146‑2246443 | ccTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATg < 2:5302757/150‑1 (MQ=255)ccTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATg < 2:267560/150‑1 (MQ=255)ccTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATg < 1:4644175/150‑1 (MQ=255) cTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATgg < 1:5592723/150‑1 (MQ=255) cTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATgg < 1:4761335/150‑1 (MQ=255) tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCaa < 2:7634130/150‑1 (MQ=255) tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCaa < 2:7330318/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 1:1149913/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:817179/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:3637870/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:3467168/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:3203501/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:1335885/150‑1 (MQ=255) cTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGc < 2:1222102/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTc < 2:5314199/150‑1 (MQ=25) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTc < 1:8556138/150‑1 (MQ=37) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc > 2:5731691/1‑150 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc < 1:8551493/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc < 1:8201185/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc < 1:275617/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 1:4975595/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:8765493/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:8765384/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:1769547/150‑1 (MQ=255) tGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACg < 2:7080017/150‑1 (MQ=21) ggACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCG‑AATGGAAAGGTAAAATAAAAATAGCAATAGCCGGCACGc > 1:3486989/1‑150 (MQ=255) gACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGcc < 2:6398007/150‑1 (MQ=25) gACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AAAGCAATGGTAAAATAAATATCGCATTCGCCGGCACGcc > 2:7207253/1‑150 (MQ=255) ctgctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCaa < 1:8073696/126‑1 (MQ=255) tgggtgggGTGTCTAATAAATAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCAATCGCCTTTTTCTGCTTTGCACATAACCAGTGGGTGGGGGGGTGCCCGCT‑AATGCATTGTTAATTTCAATATCGCATTCGCGGGCACGCCCGCTccc < 1:6627296/150‑1 (MQ=255) gggtggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAAAGGGAAATTCAAAAAAGCATTCGGCCGCACGcccccaaccc > 2:6326336/1‑143 (MQ=255) ggtggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAACGCTGTTGGCTTCCATCGCCTTATTCAGCTTGGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATCCAATATCGCATTCGCCGGCACGCCCGCTCCcac < 1:3431001/150‑1 (MQ=255) tgggtttTCGAAGAAAGAAAACAAAGTGTGGTAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAg < 2:7474616/150‑1 (MQ=38) tggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AACGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAg < 2:1472535/150‑1 (MQ=255) tttctaagaaagaAAACAAAGAGTGGGAAAAGCTTTTGGCTTCCATCGCCTGATTCAGGTTTGCACCTAACCCGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATACCGCATTCGCGGGAACGCCCGCTCCCACAGGCCaa < 2:3258839/145‑1 (MQ=255) gtCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATCTCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAc < 2:7248081/150‑1 (MQ=255) tCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑t < 2:5836986/150‑1 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGGGGGCCCGCG‑AATGCCATGGTGAAATCAAAATAGCAATGGCCCGCCCCCCCCCCCCCCCAGGCCCAC‑aaac > 2:3141211/1‑149 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 1:2686369/112‑1 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc > 2:2686369/1‑112 (MQ=255) aaGAGTGGGAAAAGGTGTTGGCTTCCATCGCCTGTTTCTGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCATTATCGCTTTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAACAACCg < 2:4975763/150‑1 (MQ=38) aaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCg < 2:7263828/150‑1 (MQ=255) agagTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCC‑CAAGCCCAGGTAAAATAAAAAAAGCAATCGCCGGCACCCCCCCGCCCCCACGCCCACAAAACCCCCAAAAAACCg > 2:5472200/1‑150 (MQ=255) gagTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCggg < 2:8223791/150‑1 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑CATGCAATGGTAAAATGAATATAGCAATCGCCGGCCCCCCCGCACCCACAGGCCAAC‑AAAACCCCCAAAAAACCGGGTAgg > 2:6741821/1‑150 (MQ=255) aaatGCTGTTGGCTTCCATCGCCTTATTCTGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGAAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGc < 2:48017/150‑1 (MQ=39) aaaaGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGGGCGGGCGGGGCCCCC‑CAAGCAAAGGTAAAATAAATAAAGCAATAGCCGGCCCCCCCCCGCCCCCCAGCCAAC‑AAAGACCCAAAAAAACCGGGTAGGGc > 2:3079852/1‑150 (MQ=255) aatggtGTTGGCTTCCTTCGCCTTTTTAAGCTTTGCACCTAACCAGTGGGTGGGGGCGTGCCCGCT‑ATTGAAATGTTAAATTCAATATCGCATTCGCCGGCCCGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCg < 1:3360465/145‑1 (MQ=255) aaaGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCg < 2:5543643/150‑1 (MQ=255) gggCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGCGCGGGGGGGCCCGCG‑ACTGCAAGGTTAAAGTCACCACCCCAGTCGCCGGCCCCCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGa < 1:1137421/149‑1 (MQ=255) gCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAtt < 2:2234871/150‑1 (MQ=255) ttCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCGCAATG‑AATGGTAAAATGCATATAGCATTAGCCCGCCCCCCCGCACCCACACGCCAAA‑AAAGCCCCCCAAAAACCGGGTAGGGCGGGAACTGGTTGt > 1:8714811/1‑150 (MQ=255) ttCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCGCG‑CCAGCCACGGGAAAATCAAAATCGCCGTCGCCCGCCCCCCCCCGCCCACCCGCCCAC‑CAAGCCCCCAAAAACCCGGGGAGGGCGGGAACTGATTGt > 2:4258253/1‑150 (MQ=255) tCCATCGCCGTTTTCAGGTTTGCCCCTACCCCGTGGGCGGGGGGGTGCCCGCT‑ATTGCTATGTTAAATCCAATATCGCCTTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGtt < 1:2668280/150‑1 (MQ=255) cATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGAAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTAt < 2:1627917/150‑1 (MQ=255) ccTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCCTGCCCCCC‑AATGCAATGGTAAAATCAAAATCGCATAAGCCCGCACGCCCGCACCCACAGGCCAAC‑AAAGCCCCAAAAAAACCGGGTAGGGCGGTAAGTGATTGTTATCtttg > 2:4922583/1‑150 (MQ=255) aGCTTTGCACCTAACCAGTGGGAGCGGGCGTGTCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAtt > 2:8205183/1‑150 (MQ=255) tttGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGACACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttttt < 1:6587550/150‑1 (MQ=255) ccccgggggCGCGGGGGTGCCCGCT‑AATGCAAGGGTAAACTCAATCTCGCCTGCGCCGCCCCGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 1:7411686/144‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 2:1332026/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 2:2760546/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 2:1507583/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 2:6077239/150‑1 (MQ=255) aCCAGTGGGAGCCGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCCCATTCGCCGCCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 2:1696752/150‑1 (MQ=255) gTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGaaa < 2:4004047/150‑1 (MQ=255) gAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTa < 1:5731691/150‑1 (MQ=255) gCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTTGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGt < 1:136059/150‑1 (MQ=255) gCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTTGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGt < 1:2694920/150‑1 (MQ=255) cGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGtt > 2:2680942/1‑150 (MQ=255) cGGGCGTGCCCGCG‑AATGCAATGGTAAAGTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGtt < 2:7985562/150‑1 (MQ=255) cGGGCGTCCCCGCT‑AATGAAAGGGTAAATTCAATACCGCATCCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGtt < 1:1833721/150‑1 (MQ=255) gggcgggcCCGCG‑AATGAAAGGTTAAATACAATATCCCATGCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGttt < 1:3941684/150‑1 (MQ=255) gggCGTGCCCGCG‑ACTGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGttt > 1:6190828/1‑150 (MQ=255) gggCGTGCCCGCG‑AATGCAATTTTAACTAAAATACCGCAGACGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGttt < 1:5531971/150‑1 (MQ=255) ggCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTg > 1:1321595/1‑150 (MQ=255) ggCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTg > 1:3767309/1‑150 (MQ=255) gcacgCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCgg > 1:5890658/5‑86 (MQ=255) gcacgCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCgg < 2:5890658/82‑1 (MQ=255) gCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGa > 1:3210559/1‑150 (MQ=255) gTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACa > 2:3825597/1‑150 (MQ=21) gTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACa > 2:3825583/1‑150 (MQ=21) tGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAg > 2:642290/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCACTATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc < 2:7825491/150‑1 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:5700664/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:6239501/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 2:454658/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:7342344/1‑150 (MQ=255) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:949702/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:950325/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:5164844/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:2750865/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:2099561/3‑150 (MQ=25) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:5640490/1‑150 (MQ=255) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:3114880/1‑150 (MQ=255) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:8287648/1‑150 (MQ=255) gcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 2:3632551/1‑150 (MQ=37) gcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 2:6315727/1‑150 (MQ=255) gctaaTGCATTGTAAAATACAATATCGCAGCCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg < 1:321691/147‑1 (MQ=255) tGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATc > 1:4469898/1‑150 (MQ=255) tGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAAc < 2:1146536/150‑1 (MQ=255) | CCTGACGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAAC > NC_002947/2246146‑2246443 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |