| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,246,298 | A→G | 11.6% | intergenic (+53/‑228) | gltX → / → PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,246,298 | 0 | A | G | 11.6% | 387.6 / 29.7 | 140 | intergenic (+53/‑228) | gltX/PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Reads supporting (aligned to +/- strand): ref base A (47/76); new base G (11/5); total (59/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.94e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01 | |||||||||||
Only 100 of 145 total aligned reads displayed.
CGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAA > NC_002947/2246151‑2246447 | cgcgCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTaaa < 2:7455680/150‑1 (MQ=255)cgcgCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAAAAAAGAGTGGGAAAATCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGAGTGCCCGCGAATGC‑AATTGTaaa < 2:6389045/150‑1 (MQ=255) ccccgccgGCGCCAGGCTCTGGACCTGCTGGGGGGGGTGTCGCACCAAGAAAACACAGCGGGGGAACAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATACat < 2:7634134/148‑2 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATc < 1:1149913/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATc < 1:6628549/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATc < 2:1335885/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATc < 2:3203501/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATc < 2:3467168/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATc < 2:3637870/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATc < 2:817179/150‑1 (MQ=255) tGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCa < 1:4402039/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCGAATGC‑GATATTGAATTTACCATTGCATTc < 1:8556138/150‑1 (MQ=37) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTc < 1:275617/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTc < 1:8201135/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTc < 1:8551493/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTc < 2:8367453/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCg < 2:8765493/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCg < 2:1769547/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCg < 2:8765384/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCg < 1:4975595/150‑1 (MQ=255) tGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCGGCGAATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACg < 2:7080017/150‑1 (MQ=21) ggACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGc < 1:2727222/150‑1 (MQ=255) ggACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCGAATGG‑AAAGGTAAAATAAAAATAGCAATAGCCGGCACGc > 1:3486989/1‑150 (MQ=255) gACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAAAGC‑AATGGTAAAATAAATATCGCATTCGCCGGCACGcc > 2:7207253/1‑150 (MQ=255) ctgctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCaa < 1:8073696/126‑1 (MQ=255) tgggtgggGTGTCTAATAAATAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCAATCGCCTTTTTCTGCTTTGCACATAACCAGTGGGTGGGGGGGTGCCCGCTAATGC‑ATTGTTAATTTCAATATCGCATTCGCGGGCACGCCCGCTccc < 1:6627296/150‑1 (MQ=255) gggtggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AAAGGGAAATTCAAAAAAGCATTCGGCCGCACGcccccaaccc > 2:6326336/1‑143 (MQ=255) ggtggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAACGCTGTTGGCTTCCATCGCCTTATTCAGCTTGGCACCTAACCTGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATCCAATATCGCATTCGCCGGCACGCCCGCTCCcac < 1:3431001/150‑1 (MQ=255) tgggtttTCGAAGAAAGAAAACAAAGTGTGGTAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAg < 2:7474616/150‑1 (MQ=38) gtCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATCTCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAc < 2:7248081/150‑1 (MQ=255) tCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑t < 2:5836986/150‑1 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATc > 2:2686369/1‑112 (MQ=255) ataaaaCAAAGTGTGGGAAAAGCTGTTGGCTTCCATCGCCTAATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCa < 2:6819672/148‑1 (MQ=255) aaGAGTGGGAAAAGGTGTTGGCTTCCATCGCCTGTTTCTGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCATTATCGCTTTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAACAACCg < 2:4975763/150‑1 (MQ=38) aaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCg < 2:7263828/150‑1 (MQ=255) aaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCg < 2:1323216/150‑1 (MQ=255) agagTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCCCAAGC‑CCAGGTAAAATAAAAAAAGCAATCGCCGGCACCCCCCCGCCCCCACGCCCACAAAACCCCCAAAAAACCg > 2:5472200/1‑150 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGCATGC‑AATGGTAAAATGAATATAGCAATCGCCGGCCCCCCCGCACCCACAGGCCAAC‑AAAACCCCCAAAAAACCGGGTAgg > 2:6741821/1‑150 (MQ=255) aaatGCTGTTGGCTTCCATCGCCTTATTCTGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCGAATGA‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGc < 2:48017/150‑1 (MQ=39) aaaGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCg < 2:5543643/150‑1 (MQ=255) gggCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGCGCGGGGGGGCCCGCGACTGC‑AAGGTTAAAGTCACCACCCCAGTCGCCGGCCCCCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGa < 1:1137421/149‑1 (MQ=255) gCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAtt < 2:2234871/150‑1 (MQ=255) ttCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCGCGCCAGC‑CACGGGAAAATCAAAATCGCCGTCGCCCGCCCCCCCCCGCCCACCCGCCCAC‑CAAGCCCCCAAAAACCCGGGGAGGGCGGGAACTGATTGt > 2:4258253/1‑150 (MQ=255) tCCATCGCCGTTTTCAGGTTTGCCCCTACCCCGTGGGCGGGGGGGTGCCCGCTATTGC‑TATGTTAAATCCAATATCGCCTTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGtt < 1:2668280/150‑1 (MQ=255) cATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGA‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTAt < 2:1627917/150‑1 (MQ=255) aTCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCAGTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATc < 2:1097886/150‑1 (MQ=255) ccTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGGCCCCGCATGCGAATGTTAAA‑TGAAAATAGCAATAGCCGGCCCGCCCCCGCCCCCACGCCAAC‑GAATCCCCCAAAAAACCGGGTGGGGCGGGGAGTGATTGTTATcattt > 2:6226451/1‑146 (MQ=255) aGCTTTGCACCTAACCAGTGGGAGCGGGCGTGTCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAAtt > 2:8205183/1‑150 (MQ=255) aGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGGAAATTCAATATCGCATTAGCCGGCCCGCCCGCTCCCACAGGCCCAC‑AAAGCCCCCAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATATGTG‑AAAAAAtt > 2:5837684/1‑150 (MQ=255) tGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGa < 2:4772741/150‑1 (MQ=255) cTAACCAGTGGGAGCGGGCGTTCCCCCGCAATC‑CATTGTTAATTAAAAAAAGCAATAGCCGGCCCCCCCCCCCCCAAAAGCCAAC‑GAAGGCCCAAAAAAAAGGGGTGGGGCGGTAAGTGGTTGTTTTGTTTGTAAAAAAtttttataatt > 2:5361266/1‑144 (MQ=255) aCCCGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCACTATCGCCTTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 1:5656824/150‑1 (MQ=255) aCCAGTGGGAGGGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATACCGCATGCGCCGGCCCGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 1:5472200/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:1507583/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:1332026/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:2760546/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:6077239/150‑1 (MQ=255) aCCAGTGGGAGCCGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCCCATTCGCCGCCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:1696752/150‑1 (MQ=255) cAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGa < 2:309262/150‑1 (MQ=255) gTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGaaa < 2:4004047/150‑1 (MQ=255) tgCGGGCGTGCCCGCGATTGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAg < 2:3783732/149‑1 (MQ=255) gCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTTGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGt < 1:2694920/150‑1 (MQ=255) gCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTTGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGt < 1:136059/150‑1 (MQ=255) cGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGtt > 2:2680942/1‑150 (MQ=255) cGGGCGTGCCCGCGAATGC‑AATGGTAAAGTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGtt < 2:7985562/150‑1 (MQ=255) cGGGCGTCCCCGCTAATGA‑AAGGGTAAATTCAATACCGCATCCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGtt < 1:1833721/150‑1 (MQ=255) ggCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTg > 1:1321595/1‑150 (MQ=255) ggCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTg > 1:3767309/1‑150 (MQ=255) gcacgCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCgg > 1:5890658/5‑86 (MQ=255) gCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCAGTCGCCGCCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGa < 2:3212414/150‑1 (MQ=255) gTGCCGGCGAATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACa > 2:3825597/1‑150 (MQ=21) tGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAg > 2:642290/1‑150 (MQ=255) cccGCGAATGC‑AATGGTAAATTCACTATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc < 2:7825491/150‑1 (MQ=255) cccGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 2:454658/1‑150 (MQ=255) cccGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:5700664/1‑150 (MQ=255) cccGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:6239501/1‑150 (MQ=255) cccGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:7342344/1‑150 (MQ=255) cggcgAATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:2916018/3‑150 (MQ=25) cggcgAATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:949702/3‑150 (MQ=25) cggcgAATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:950325/3‑150 (MQ=25) cggcgAATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:2099561/3‑150 (MQ=25) cggcgAATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:5164844/3‑150 (MQ=25) ccGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:8287648/1‑150 (MQ=255) ccGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:3114880/1‑150 (MQ=255) ccGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:5640490/1‑150 (MQ=255) gctaaTGC‑ATTGTAAAATACAATATCGCAGCCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg < 1:321691/147‑1 (MQ=255) gcgAATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 1:6267911/1‑150 (MQ=37) tGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATc > 1:4469898/1‑150 (MQ=255) c‑AATGGTAAATTCAATATCGCTTTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCACAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCg < 2:3615943/150‑1 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:3358547/1‑150 (MQ=255) aaTGGTAAATTCAAGATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:6149710/1‑150 (MQ=255) tGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAAc < 2:1146536/150‑1 (MQ=255) tGGTAAATTCAATAGCGCATTCGCCGGCCCGCCCGCTCCCACAGGCCCAC‑TACGCCCCAAAACACCGGGGTAGGGCGGTAAGTGATTGTGATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAAc < 2:5213192/150‑1 (MQ=255) gTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 1:1856654/1‑150 (MQ=255) gTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 1:3620335/1‑150 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAAtttt > 2:8347055/1‑104 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAAtttt < 1:8347055/104‑1 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTa > 2:4106029/1‑150 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTa > 1:30167/1‑150 (MQ=255) aaaTTCAATATCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTaa < 2:5656165/150‑1 (MQ=255) | CGCGCTACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAA > NC_002947/2246151‑2246447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |