| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,246,303 | C→T | 11.2% | intergenic (+58/‑223) | gltX → / → PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,246,303 | 0 | C | T | 11.2% | 374.0 / 29.6 | 149 | intergenic (+58/‑223) | gltX/PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Reads supporting (aligned to +/- strand): ref base C (48/76); new base T (10/5); total (67/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.20e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.68e-01 | |||||||||||
Only 100 of 150 total aligned reads displayed.
TACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGC > NC_002947/2246156‑2246452 | tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCaa < 2:2026499/150‑1 (MQ=255)tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCaa < 2:7634130/150‑1 (MQ=255)tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCaa < 2:7330318/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 1:1149913/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 1:6628549/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:1335885/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:3203501/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:3467168/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:3637870/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:817179/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc > 1:1335885/1‑150 (MQ=255) cTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGc < 2:1222102/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc < 1:8201185/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc < 1:8551493/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc > 2:5731691/1‑150 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc < 2:8367453/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:8765384/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:1769547/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:8765493/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTCTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 1:4975328/150‑1 (MQ=255) tGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACg < 2:7080017/150‑1 (MQ=21) ggACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGc < 1:2727222/150‑1 (MQ=255) ggACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCG‑AATGGAAAGGTAAAATAAAAATAGCAATAGCCGGCACGc > 1:3486989/1‑150 (MQ=255) gACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGcc < 2:255268/150‑1 (MQ=25) gACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATAAAGCATTCGCCGGCACGcc > 2:7207315/1‑150 (MQ=255) ctgctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCaa < 1:8073696/126‑1 (MQ=255) gggtggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAAAGGGAAATTCAAAAAAGCATTCGGCCGCACGcccccaaccc > 2:6326336/1‑143 (MQ=255) ggtggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAACGCTGTTGGCTTCCATCGCCTTATTCAGCTTGGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATCCAATATCGCATTCGCCGGCACGCCCGCTCCcac < 1:3431001/150‑1 (MQ=255) tggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AACGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAg < 2:1472535/150‑1 (MQ=255) tCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑t < 2:5836986/150‑1 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc > 2:2686369/1‑112 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 1:2686369/112‑1 (MQ=255) ataaaaCAAAGTGTGGGAAAAGCTGTTGGCTTCCATCGCCTAATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCa < 2:6819672/148‑1 (MQ=255) aaGAGTGGGAAAAGGTGTTGGCTTCCATCGCCTGTTTCTGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCATTATCGCTTTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAACAACCg < 2:4975763/150‑1 (MQ=38) aaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCg < 2:7263828/150‑1 (MQ=255) aaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCg < 2:1323216/150‑1 (MQ=255) agagTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCC‑CAAGCCCAGGTAAAATAAAAAAAGCAATCGCCGGCACCCCCCCGCCCCCACGCCCACAAAACCCCCAAAAAACCg > 2:5472200/1‑150 (MQ=255) tgTGGTAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCgggg < 2:1628609/149‑1 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑CATGCAATGGTAAAATGAATATAGCAATCGCCGGCCCCCCCGCACCCACAGGCCAAC‑AAAACCCCCAAAAAACCGGGTAgg > 2:6741821/1‑150 (MQ=255) aaatGCTGTTGGCTTCCATCGCCTTATTCTGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGAAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGc < 2:48017/150‑1 (MQ=39) gggCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGCGCGGGGGGGCCCGCG‑ACTGCAAGGTTAAAGTCACCACCCCAGTCGCCGGCCCCCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGa < 1:1137421/149‑1 (MQ=255) gCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAtt < 2:2234871/150‑1 (MQ=255) ttCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCGCAATG‑AATGGTAAAATGCATATAGCATTAGCCCGCCCCCCCGCACCCACACGCCAAA‑AAAGCCCCCCAAAAACCGGGTAGGGCGGGAACTGGTTGt > 1:8714811/1‑150 (MQ=255) ttCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCGCG‑CCAGCCACGGGAAAATCAAAATCGCCGTCGCCCGCCCCCCCCCGCCCACCCGCCCAC‑CAAGCCCCCAAAAACCCGGGGAGGGCGGGAACTGATTGt > 2:4258253/1‑150 (MQ=255) tCCATCGCCGTTTTCAGGTTTGCCCCTACCCCGTGGGCGGGGGGGTGCCCGCT‑ATTGCTATGTTAAATCCAATATCGCCTTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGtt < 1:2668280/150‑1 (MQ=255) cATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGAAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTAt < 2:1627917/150‑1 (MQ=255) aTCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCAGTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATc < 2:1097886/150‑1 (MQ=255) aGCTTTGCACCTAACCAGTGGGAGCGGGCGTGTCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAAtt > 2:8205183/1‑150 (MQ=255) tttGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGACACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAAttttt < 1:6587550/150‑1 (MQ=255) tGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGa < 2:4772741/150‑1 (MQ=255) cTAACCAGTGGGAGCGGGCGTTCCCCCG‑CAATCCATTGTTAATTAAAAAAAGCAATAGCCGGCCCCCCCCCCCCCAAAAGCCAAC‑GAAGGCCCAAAAAAAAGGGGTGGGGCGGTAAGTGGTTGTTTTGTTTGTAAAAAAtttttataatt > 2:5361266/1‑144 (MQ=255) aCCCGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCACTATCGCCTTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 1:5656824/150‑1 (MQ=255) aCCAGTGGGAGGGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATACCGCATGCGCCGGCCCGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 1:5472200/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:2760546/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:6077239/150‑1 (MQ=255) cAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGa < 2:309262/150‑1 (MQ=255) gTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGaaa < 2:4004047/150‑1 (MQ=255) cGGGCGTGCCCGCG‑AATGCAATGGTAAAGTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGtt < 2:7985562/150‑1 (MQ=255) cGGGCGTCCCCGCT‑AATGAAAGGGTAAATTCAATACCGCATCCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGtt < 1:1833721/150‑1 (MQ=255) gggcgggcCCGCG‑AATGAAAGGTTAAATACAATATCCCATGCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGttt < 1:3941684/150‑1 (MQ=255) gggCGTGCCCGCG‑ACTGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGttt > 1:6190828/1‑150 (MQ=255) ggCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTg > 1:3767309/1‑150 (MQ=255) ggCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTg > 1:1321595/1‑150 (MQ=255) gcacgCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCgg > 1:5890658/5‑86 (MQ=255) gcacgCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCgg < 2:5890658/82‑1 (MQ=255) gCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCAGTCGCCGCCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGa < 2:3212414/150‑1 (MQ=255) gTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACa > 2:3825583/1‑150 (MQ=21) gTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACa > 2:3825597/1‑150 (MQ=21) tGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAg > 2:642290/1‑150 (MQ=255) tGCCCGCG‑AATGCAATGGTAAATTCAATATAGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAg > 2:5635754/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCACTATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc < 2:7825491/150‑1 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 2:454658/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:5700664/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:7342344/1‑150 (MQ=255) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:2916018/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:2750865/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:950325/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:949702/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:5164844/3‑150 (MQ=25) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:5640490/1‑150 (MQ=255) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:8287648/1‑150 (MQ=255) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:3114880/1‑150 (MQ=255) gcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 1:6267911/1‑150 (MQ=37) gcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 2:6315727/1‑150 (MQ=255) gctaaTGCATTGTAAAATACAATATCGCAGCCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg < 1:321691/147‑1 (MQ=255) tGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATc > 1:4469898/1‑150 (MQ=255) cAATGGTAAATTCAATATCGCTTTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCACAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCg < 2:3615943/150‑1 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:8501028/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:3358547/1‑150 (MQ=255) aaTGGTAAATTCAAGATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:6149710/1‑150 (MQ=255) tGGTAAATTCAATAGCGCATTCGCCGGCCCGCCCGCTCCCACAGGCCCAC‑TACGCCCCAAAACACCGGGGTAGGGCGGTAAGTGATTGTGATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAAc < 2:5213192/150‑1 (MQ=255) gTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 1:1856379/1‑150 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAAtttt > 2:8347055/1‑104 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTa > 2:4106029/1‑150 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTa > 1:30167/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:3715859/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:7614451/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:7208498/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 1:5954720/1‑150 (MQ=255) cAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATgc < 1:7923332/150‑1 (MQ=255) | TACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGC > NC_002947/2246156‑2246452 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |