| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,246,305 | A→C | 12.2% | intergenic (+60/‑221) | gltX → / → PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,246,305 | 0 | A | C | 12.2% | 379.9 / 36.6 | 143 | intergenic (+60/‑221) | gltX/PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Reads supporting (aligned to +/- strand): ref base A (56/68); new base C (10/8); total (66/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.80e-01 | |||||||||||
Only 100 of 153 total aligned reads displayed.
TACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGC > NC_002947/2246156‑2246454 | tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCaa < 2:7330318/150‑1 (MQ=255)tACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCaa < 2:7634130/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATc < 1:1149913/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATc < 2:3467168/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATc < 2:3637870/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATc < 2:3203501/150‑1 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATc > 1:1335885/1‑150 (MQ=255) gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATc < 2:1335885/150‑1 (MQ=255) cTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGc < 2:1222102/150‑1 (MQ=255) tGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCa < 1:4402039/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCGGCG‑AATGC‑GATATTGAATTTACCATTGCATTc < 2:5314199/150‑1 (MQ=25) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGC‑GATATTGAATTTACCATTGCATTc < 1:8556138/150‑1 (MQ=37) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTc < 1:8201185/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTc < 2:8367453/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTc < 1:275617/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCg < 1:4975595/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCg < 2:1769547/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCg < 2:8765493/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTCTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCg < 1:4975328/150‑1 (MQ=255) tGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCGGCG‑AATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACg < 2:7080017/150‑1 (MQ=21) ggACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGc < 1:2727222/150‑1 (MQ=255) gACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGcc < 2:6398007/150‑1 (MQ=25) gACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATAAAGCATTCGCCGGCACGcc > 2:7207315/1‑150 (MQ=255) ctgctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCaa < 1:8073696/126‑1 (MQ=255) ctgctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCaa > 2:8073696/1‑126 (MQ=255) tgggtgggGTGTCTAATAAATAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCAATCGCCTTTTTCTGCTTTGCACATAACCAGTGGGTGGGGGGGTGCCCGCT‑AATGC‑ATTGTTAATTTCAATATCGCATTCGCGGGCACGCCCGCTccc < 1:6627296/150‑1 (MQ=255) gggtggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AAAGGGAAATTCAAAAAAGCATTCGGCCGCACGcccccaaccc > 2:6326336/1‑143 (MQ=255) ggtggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAACGCTGTTGGCTTCCATCGCCTTATTCAGCTTGGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATCCAATATCGCATTCGCCGGCACGCCCGCTCCcac < 1:3431001/150‑1 (MQ=255) tCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑t < 2:5836986/150‑1 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGGGGGCCCGCG‑AATGC‑CATGGTGAAATCAAAATAGCAATGGCCCGCCCCCCCCCCCCCCCAGGCCCAC‑aaac > 2:3141211/1‑149 (MQ=255) ataaaaCAAAGTGTGGGAAAAGCTGTTGGCTTCCATCGCCTAATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCa < 2:6819672/148‑1 (MQ=255) aaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCg < 2:7263828/150‑1 (MQ=255) agagTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCC‑CAAGC‑CCAGGTAAAATAAAAAAAGCAATCGCCGGCACCCCCCCGCCCCCACGCCCACAAAACCCCCAAAAAACCg > 2:5472200/1‑150 (MQ=255) gagTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCggg < 2:8223791/150‑1 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGGCCCCG‑AATGA‑AAAGGTAAATTAAATATACCATTCGCCCGCAAGCCACCGCCCACAGGCCAAA‑AAAGCCCCAAAAAACCCGGGTAgg > 2:8769717/1‑150 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑CATGC‑AATGGTAAAATGAATATAGCAATCGCCGGCCCCCCCGCACCCACAGGCCAAC‑AAAACCCCCAAAAAACCGGGTAgg > 2:6741821/1‑150 (MQ=255) aaatGCTGTTGGCTTCCATCGCCTTATTCTGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGA‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGc < 2:48017/150‑1 (MQ=39) aaaaGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGGGCGGGCGGGGCCCCC‑CAAGC‑AAAGGTAAAATAAATAAAGCAATAGCCGGCCCCCCCCCGCCCCCCAGCCAAC‑AAAGACCCAAAAAAACCGGGTAGGGc > 2:3079852/1‑150 (MQ=255) aatggtGTTGGCTTCCTTCGCCTTTTTAAGCTTTGCACCTAACCAGTGGGTGGGGGCGTGCCCGCT‑ATTGA‑AATGTTAAATTCAATATCGCATTCGCCGGCCCGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCg < 1:3360465/145‑1 (MQ=255) aaaGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCg < 2:5543643/150‑1 (MQ=255) gggCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGCGCGGGGGGGCCCGCG‑ACTGC‑AAGGTTAAAGTCACCACCCCAGTCGCCGGCCCCCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGa < 1:1137421/149‑1 (MQ=255) gCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGAtt < 2:2234871/150‑1 (MQ=255) ttCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCGCAATG‑‑AATGGTAAAATGCATATAGCATTAGCCCGCCCCCCCGCACCCACACGCCAAA‑AAAGCCCCCCAAAAACCGGGTAGGGCGGGAACTGGTTGt > 1:8714811/1‑150 (MQ=255) ttCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCGCG‑CCAGC‑CACGGGAAAATCAAAATCGCCGTCGCCCGCCCCCCCCCGCCCACCCGCCCAC‑CAAGCCCCCAAAAACCCGGGGAGGGCGGGAACTGATTGt > 2:4258253/1‑150 (MQ=255) tCCATCGCCGTTTTCAGGTTTGCCCCTACCCCGTGGGCGGGGGGGTGCCCGCT‑ATTGC‑TATGTTAAATCCAATATCGCCTTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGtt < 1:2668280/150‑1 (MQ=255) cATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGA‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTAt < 2:1627917/150‑1 (MQ=255) ccTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGGCCCCG‑CATGCGAATGTTAAA‑TGAAAATAGCAATAGCCGGCCCGCCCCCGCCCCCACGCCAAC‑GAATCCCCCAAAAAACCGGGTGGGGCGGGGAGTGATTGTTATcattt > 2:6226451/1‑146 (MQ=255) ccTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCCTGCCCCCC‑AATGC‑AATGGTAAAATCAAAATCGCATAAGCCCGCACGCCCGCACCCACAGGCCAAC‑AAAGCCCCAAAAAAACCGGGTAGGGCGGTAAGTGATTGTTATCtttg > 2:4922583/1‑150 (MQ=255) aGCTTTGCACCTAACCAGTGGGAGCGGGCGTGTCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAtt > 2:8205183/1‑150 (MQ=255) aGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGGAAATTCAATATCGCATTAGCCGGCCCGCCCGCTCCCACAGGCCCAC‑AAAGCCCCCAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATATGTGAAAAAAtt > 2:5837684/1‑150 (MQ=255) tttGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGACACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttttt < 1:6587550/150‑1 (MQ=255) ccccgggggCGCGGGGGTGCCCGCT‑AATGC‑AAGGGTAAACTCAATCTCGCCTGCGCCGCCCCGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 1:7411686/144‑1 (MQ=255) aCCAGTGGGAGGGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATACCGCATGCGCCGGCCCGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 1:5472200/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 2:1507583/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 2:1332026/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 2:2760546/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 2:6077239/150‑1 (MQ=255) aCCAGTGGGAGCCGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCCCATTCGCCGCCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 2:1696752/150‑1 (MQ=255) gTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGaaa < 2:4004047/150‑1 (MQ=255) gAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTa < 1:5731691/150‑1 (MQ=255) gCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTTGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGt < 1:2694920/150‑1 (MQ=255) cGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGtt > 2:2680942/1‑150 (MQ=255) cGGGCGTGCCCGCG‑AATGC‑AATGGTAAAGTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGtt < 2:7985562/150‑1 (MQ=255) cGGGCGTCCCCGCT‑AATGA‑AAGGGTAAATTCAATACCGCATCCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGtt < 1:1833721/150‑1 (MQ=255) gggcgggcCCGCG‑AATGA‑AAGGTTAAATACAATATCCCATGCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGttt < 1:3941684/150‑1 (MQ=255) gggCGTGCCCGCG‑ACTGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGttt > 1:6190828/1‑150 (MQ=255) gggCGTGCCCGCG‑AATGC‑AATTTTAACTAAAATACCGCAGACGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGttt < 1:5531971/150‑1 (MQ=255) ggCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTg > 1:1321595/1‑150 (MQ=255) gCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGa > 1:3210559/1‑150 (MQ=255) gCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCAGTCGCCGCCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGa < 2:3212414/150‑1 (MQ=255) gTGCCGGCG‑AATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACa > 2:3825583/1‑150 (MQ=21) gTGCCGGCG‑AATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACa > 2:3825597/1‑150 (MQ=21) cccGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:5700664/1‑150 (MQ=255) cccGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:6239501/1‑150 (MQ=255) cccGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:7342344/1‑150 (MQ=255) cggcg‑AATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:2099561/3‑150 (MQ=25) cggcg‑AATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:950325/3‑150 (MQ=25) cggcg‑AATGC‑GATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:2916018/3‑150 (MQ=25) ccGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:3114880/1‑150 (MQ=255) ccGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:5640490/1‑150 (MQ=255) gctaaTGC‑ATTGTAAAATACAATATCGCAGCCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg < 1:321691/147‑1 (MQ=255) c‑AATGGTAAATTCAATATCGCTTTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCACAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCg < 2:3615943/150‑1 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:8501028/1‑150 (MQ=255) tGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAAc < 2:1146536/150‑1 (MQ=255) tGGTAAATTCAATAGCGCATTCGCCGGCCCGCCCGCTCCCACAGGCCCAC‑TACGCCCCAAAACACCGGGGTAGGGCGGTAAGTGATTGTGATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAAc < 2:5213192/150‑1 (MQ=255) gTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 1:1856379/1‑150 (MQ=255) gTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 1:3620335/1‑150 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAtttt < 1:8347055/104‑1 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTa > 2:4593135/1‑150 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTa > 2:4106029/1‑150 (MQ=255) aaaTTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTaa > 2:8711702/1‑150 (MQ=255) aaaTTCAATATCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTaa < 2:5656165/150‑1 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:7614451/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:7208498/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:3715859/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 1:5954720/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 1:6142538/1‑150 (MQ=255) atatCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATgcgc > 2:4530460/1‑150 (MQ=255) atatCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATgcgc > 1:1999012/1‑150 (MQ=255) atatCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATgcgc < 1:8234337/150‑1 (MQ=255) | TACCGCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGC‑AATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAC‑TAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGC > NC_002947/2246156‑2246454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |