| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,246,309 | C→T | 10.8% | intergenic (+64/‑217) | gltX → / → PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,246,309 | 0 | C | T | 10.8% | 371.6 / 27.9 | 147 | intergenic (+64/‑217) | gltX/PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Reads supporting (aligned to +/- strand): ref base C (54/66); new base T (10/5); total (76/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.31e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
GCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCG > NC_002947/2246160‑2246458 | gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:817179/150‑1 (MQ=255)gCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 2:3203501/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTc < 2:5314199/150‑1 (MQ=25) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTc < 1:8556138/150‑1 (MQ=37) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc < 1:8201135/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc < 2:8367453/150‑1 (MQ=255) gcCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTc > 2:5731691/1‑150 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:8765493/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:1769547/150‑1 (MQ=255) ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTCTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCg < 1:4975328/150‑1 (MQ=255) ggACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGc < 1:2727222/150‑1 (MQ=255) ggACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCG‑AATGGAAAGGTAAAATAAAAATAGCAATAGCCGGCACGc > 1:3486989/1‑150 (MQ=255) gACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGcc < 2:255268/150‑1 (MQ=25) gACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AAAGCAATGGTAAAATAAATATCGCATTCGCCGGCACGcc > 2:7207253/1‑150 (MQ=255) tgggtgggGTGTCTAATAAATAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCAATCGCCTTTTTCTGCTTTGCACATAACCAGTGGGTGGGGGGGTGCCCGCT‑AATGCATTGTTAATTTCAATATCGCATTCGCGGGCACGCCCGCTccc < 1:6627296/150‑1 (MQ=255) tgggtttTCGAAGAAAGAAAACAAAGTGTGGTAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAg < 2:7474616/150‑1 (MQ=38) tggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AACGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAg < 2:1472535/150‑1 (MQ=255) tttctaagaaagaAAACAAAGAGTGGGAAAAGCTTTTGGCTTCCATCGCCTGATTCAGGTTTGCACCTAACCCGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATACCGCATTCGCGGGAACGCCCGCTCCCACAGGCCaa < 2:3258839/145‑1 (MQ=255) gtCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATCTCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAAc < 2:7248081/150‑1 (MQ=255) tCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACt < 2:5836986/150‑1 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc < 1:2686369/112‑1 (MQ=255) aagaaagaAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATc > 2:2686369/1‑112 (MQ=255) aaGAGTGGGAAAAGGTGTTGGCTTCCATCGCCTGTTTCTGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCATTATCGCTTTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAACAACCg < 2:4975763/150‑1 (MQ=38) aaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCg < 2:1323216/150‑1 (MQ=255) gagTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCggg < 2:8223791/150‑1 (MQ=255) tgTGGTAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCgggg < 2:1628609/149‑1 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGGCCCCG‑AATGAAAAGGTAAATTAAATATACCATTCGCCCGCAAGCCACCGCCCACAGGCCAAAAAAGCCCCAAAAAACCCGGGTAgg > 2:8769717/1‑150 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑CATGCAATGGTAAAATGAATATAGCAATCGCCGGCCCCCCCGCACCCACAGGCCAACAAAACCCCCAAAAAACCGGGTAgg > 2:6741821/1‑150 (MQ=255) aaatGCTGTTGGCTTCCATCGCCTTATTCTGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCG‑AATGAAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGc < 2:48017/150‑1 (MQ=39) aatggtGTTGGCTTCCTTCGCCTTTTTAAGCTTTGCACCTAACCAGTGGGTGGGGGCGTGCCCGCT‑ATTGAAATGTTAAATTCAATATCGCATTCGCCGGCCCGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCg < 1:3360465/145‑1 (MQ=255) aaaGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCg < 2:5543643/150‑1 (MQ=255) gggCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGCGCGGGGGGGCCCGCG‑ACTGCAAGGTTAAAGTCACCACCCCAGTCGCCGGCCCCCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGa < 1:1137421/149‑1 (MQ=255) ttCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCGCAATG‑AATGGTAAAATGCATATAGCATTAGCCCGCCCCCCCGCACCCACACGCCAAAAAAGCCCCCCAAAAACCGGGTAGGGCGGGAACTGGTTGt > 1:8714811/1‑150 (MQ=255) ttCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCGCG‑CCAGCCACGGGAAAATCAAAATCGCCGTCGCCCGCCCCCCCCCGCCCACCCGCCCACCAAGCCCCCAAAAACCCGGGGAGGGCGGGAACTGATTGt > 2:4258253/1‑150 (MQ=255) tCCATCGCCGTTTTCAGGTTTGCCCCTACCCCGTGGGCGGGGGGGTGCCCGCT‑ATTGCTATGTTAAATCCAATATCGCCTTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGtt < 1:2668280/150‑1 (MQ=255) cATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGAAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTAt < 2:1627917/150‑1 (MQ=255) ccTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCCTGCCCCCC‑AATGCAATGGTAAAATCAAAATCGCATAAGCCCGCACGCCCGCACCCACAGGCCAACAAAGCCCCAAAAAAACCGGGTAGGGCGGTAAGTGATTGTTATCtttg > 2:4922583/1‑150 (MQ=255) tttGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGACACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAAttttt < 1:6587550/150‑1 (MQ=255) cTAACCAGTGGGAGCGGGCGTTCCCCCG‑CAATCCATTGTTAATTAAAAAAAGCAATAGCCGGCCCCCCCCCCCCCAAAAGCCAACGAAGGCCCAAAAAAAAGGGGTGGGGCGGTAAGTGGTTGTTTTGTTTGTAAAAAAtttttataatt > 2:5361266/1‑144 (MQ=255) aCCCGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCACTATCGCCTTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 1:5656824/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:6077239/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:2760546/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATAttttt < 2:1332026/150‑1 (MQ=255) cAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGa < 2:309262/150‑1 (MQ=255) gTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGaaa < 2:4004047/150‑1 (MQ=255) gAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTa < 1:5731691/150‑1 (MQ=255) tgCGGGCGTGCCCGCG‑ATTGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAg < 2:3783732/149‑1 (MQ=255) gCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTTGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGt < 1:136059/150‑1 (MQ=255) cGGGCGTGCCCGCG‑AATGCAATGGTAAAGTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGtt < 2:7985562/150‑1 (MQ=255) cGGGCGTCCCCGCT‑AATGAAAGGGTAAATTCAATACCGCATCCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGtt < 1:1833721/150‑1 (MQ=255) gggcgggcCCGCG‑AATGAAAGGTTAAATACAATATCCCATGCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGttt < 1:3941684/150‑1 (MQ=255) gggCGTGCCCGCG‑ACTGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGttt > 1:6190828/1‑150 (MQ=255) gggCGTGCCCGCG‑AATGCAATTTTAACTAAAATACCGCAGACGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGttt < 1:5531971/150‑1 (MQ=255) ggCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTg > 1:1321595/1‑150 (MQ=255) gcacgCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCgg < 2:5890658/82‑1 (MQ=255) gCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGa > 1:3210559/1‑150 (MQ=255) gTGCCGGCG‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACa > 2:3825597/1‑150 (MQ=21) tGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAg > 2:642290/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 2:454658/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:6239501/1‑150 (MQ=255) cccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:7342344/1‑150 (MQ=255) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:950325/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:2916018/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:2750865/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:2099561/3‑150 (MQ=25) cggcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:5164844/3‑150 (MQ=25) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:3114880/1‑150 (MQ=255) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:8287648/1‑150 (MQ=255) ccGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 2:5640490/1‑150 (MQ=255) gcg‑AATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 2:3632551/1‑150 (MQ=37) gcg‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 2:6315727/1‑150 (MQ=255) tGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATc > 1:4469898/1‑150 (MQ=255) cAATGGTAAATTCAATATCGCTTTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCACAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCg < 2:3615943/150‑1 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:3358547/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:8501028/1‑150 (MQ=255) tGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAAc < 2:1146536/150‑1 (MQ=255) gTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 1:3620335/1‑150 (MQ=255) gTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 1:1856654/1‑150 (MQ=255) gTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 2:69108/1‑150 (MQ=255) tAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTa > 2:4593135/1‑150 (MQ=255) aaaTTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTaa > 2:8711702/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 1:1303257/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:7614451/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:3715859/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 1:5954720/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:7208498/1‑150 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 1:6142538/1‑150 (MQ=255) cAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATgc < 1:7923332/150‑1 (MQ=255) atatCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATgcgc < 1:8234337/150‑1 (MQ=255) atatCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATgcgc < 2:3150108/150‑1 (MQ=255) tatCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcc > 2:6992860/1‑150 (MQ=255) tatCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcc > 2:1192288/1‑150 (MQ=255) tatCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcc > 1:2944301/1‑150 (MQ=255) tatCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcc > 1:1015595/1‑150 (MQ=255) tatCGCATTCGCCGGCACGCCCGCTCCCACACGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGAACGTGATTGTTATCTGTG‑AAAAAAGTTGTGAATATGTTTGAAACGTAGTTTGACAGCCCTGCAATCCGAACTTAAAATGCGcc > 2:4459821/1‑150 (MQ=255) tCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcccc > 2:6231041/1‑150 (MQ=255) tCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcccc > 2:5575522/1‑150 (MQ=255) tCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcccc > 1:5019153/1‑150 (MQ=255) tCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcccc > 2:3994388/1‑150 (MQ=255) cGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTTACAGCCCTGCAATCCGAACTTAATATGCGCCCCg > 2:6377640/1‑150 (MQ=255) | GCCTGCGCCAGGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCG‑AATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAGCCCCAAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTG‑AAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCG > NC_002947/2246160‑2246458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |