BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,276,219	T→A	10.3%	intergenic (+48/‑172)	PP_2002 → / → PP_t31	oxidoreductase/tRNA‑Val

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,276,219	0	T	A	10.3%	760.4 / 11.3	305	intergenic (+48/‑172)	PP_2002/PP_t31	oxidoreductase/tRNA‑Val
Reads supporting (aligned to +/- strand): ref base T (119/134); new base A (36/4); total (166/139)
Fisher's exact test for biased strand distribution p-value = 1.18e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 309 total aligned reads displayed.

GCGGCCATGGTTGCCTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGC  >  NC_002947/2276070‑2276367

gcgGCCATGGTTGCCTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCt                                                                                                                                                       <  2:5316253/150‑1 (MQ=255)

     cATGGTTGCCTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACATGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAAACCCCACCaaca‑ac                                                                                                                                                 >  1:4601162/1‑150 (MQ=255)

      aTGGTTGCCTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACg                                                                                                                                                <  1:709500/150‑1 (MQ=255)

      aTGGTTGCCTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACg                                                                                                                                                <  2:8053760/150‑1 (MQ=255)

         gTTGCCTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGtt                                                                                                                                             <  2:1317440/150‑1 (MQ=255)

         gTTGCCTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCGCGTCGCGGCAAAAACCCCACCGACa‑aacggt                                                                                                                                             >  1:2311386/1‑145 (MQ=255)

           tGCCTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTaa                                                                                                                                           <  1:5958821/150‑1 (MQ=255)

            gCCTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAAt                                                                                                                                          <  1:7199253/150‑1 (MQ=255)

            gCCTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAAt                                                                                                                                          >  2:7816247/1‑150 (MQ=255)

              cTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCGCGTACCCGCTAAACCCGCCCCAACA‑ACCGTTAATGt                                                                                                                                        >  1:8503277/1‑150 (MQ=255)

               tGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTc                                                                                                                                       <  1:8215936/150‑1 (MQ=255)

               tGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTc                                                                                                                                       <  2:1489553/150‑1 (MQ=255)

               tGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTc                                                                                                                                       <  2:5991502/150‑1 (MQ=255)

               tGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAAACCGCTCCTACA‑ACGGTTAATGTc                                                                                                                                       >  2:3569634/1‑150 (MQ=255)

                ggTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTcc                                                                                                                                      <  2:5766073/150‑1 (MQ=255)

                    gCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCGCTTCGCGGCTAAACACCCGCCGACA‑ACGGTTAATGTGCgccg                                                                                                                                  >  1:1662103/1‑147 (MQ=255)

                      tGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGt                                                                                                                                <  2:6962831/150‑1 (MQ=255)

                      tGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCCCTCCTACA‑ACGGTTAATGTCCGACTGt                                                                                                                                >  1:1391169/1‑150 (MQ=255)

                      tGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCAAAACCCGCACCAACA‑ACGGTTAATGTCCGACGGt                                                                                                                                >  2:1151301/1‑150 (MQ=255)

                      tGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCGTCGCGGCTAAACCCCCTCCAACA‑ACGGTTAATGTCCGACGGt                                                                                                                                >  1:6906242/1‑150 (MQ=255)

                        tCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACGGTAg                                                                                                                              >  2:8740757/1‑150 (MQ=255)

                        tCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCATCGCGGCTAAAACCCCTCCGACA‑ACGGTTAATGTCCGACGGTAg                                                                                                                              >  1:4705763/1‑150 (MQ=255)

                        tCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCGCATCGCGGCGAAAACCCCGCCAAAA‑AACGGTAATTTACGACTGTAg                                                                                                                              >  1:191885/1‑150 (MQ=255)

                          aCGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCCCTCCTAAA‑ACGGTTAATTTCCGACTGTAGGa                                                                                                                            >  1:8782179/1‑150 (MQ=255)

                            gCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGc                                                                                                                          >  2:7405750/1‑150 (MQ=255)

                            gCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCCCTCCTACA‑ACGGGTAATGTCCGTCGGTAGGAGc                                                                                                                          >  1:6423609/1‑150 (MQ=255)

                              cAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCgg                                                                                                                        <  1:4499764/150‑1 (MQ=255)

                              cAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCACATCGCGGCTAAAACCCCACCAACA‑ACGGTTAATGTCCGACAGTAGGAGCgg                                                                                                                        >  1:2871845/1‑150 (MQ=255)

                               aGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCggg                                                                                                                       <  2:3538238/150‑1 (MQ=255)

                                 gcggcATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTAGCGGCTAAACCCCCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCggggt                                                                                                                     >  2:3402975/1‑148 (MQ=255)

                                  cggcATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAAACCGCTCCTACA‑ACCGTTAATTTCCGACTGTAGGAGCGGGttt                                                                                                                    >  2:4538929/1‑150 (MQ=255)

                                          gTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCg                                                                                                                         <  2:2223969/137‑1 (MQ=255)

                                           tCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGTCGGACATTAACCG‑TTGTAGGAGCGGGTTTAGCCGCGaa                                                                                                           <  1:6712575/150‑1 (MQ=18)

                                           tCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGTCGGACATTAACCG‑TTGTAGGAGCGGGTTTAGCCGCGaa                                                                                                           <  1:2979647/150‑1 (MQ=18)

                                           tCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGaa                                                                                                           <  1:6193155/150‑1 (MQ=255)

                                           tCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGaa                                                                                                           <  1:6672765/150‑1 (MQ=255)

                                           tCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGaa                                                                                                           >  1:7312271/1‑150 (MQ=255)

                                           tCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCACTTAGCGGCAAAACCCCCGCCTACA‑ACGGGTAATTTACGACGGTAGGAGCGGGGTTAAACGCGaa                                                                                                           >  1:1237092/1‑150 (MQ=255)

                                           tCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCACATGGCGGCGAAAACCCCACCAAAA‑ACCGTTAATTTCCGACAGTAGGAGCGGGGTTTccccccac                                                                                                           >  1:3807276/1‑145 (MQ=255)

                                             aCCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAaga                                                                                                         >  2:6498330/1‑150 (MQ=255)

                                             aCCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAaga                                                                                                         <  2:7379841/150‑1 (MQ=255)

                                               cGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAAACCGCTCCTACA‑ACGGTTAATGTCAGACTGTAGGAGCGGGTTTACCCGCGAAGAgg                                                                                                       >  2:1812909/1‑150 (MQ=255)

                                                ggCCAGGAGTTTGTGGTCGTTGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACGTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                                      <  1:244893/150‑1 (MQ=255)

                                                 gCCCGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACGGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTCGGAGCGGGTTTACCCGCGAAGAGGcc                                                                                                     <  1:2535742/150‑1 (MQ=255)

                                                   cAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCATCGCGGCTAAACCCGCTCCAACA‑ACCGTTAATGTCCGACAGTAGGAGCGGGTTTACCCCCGAACAGGcccg                                                                                                   >  2:6218677/1‑148 (MQ=255)

                                                         tttGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACC‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCACAgg                                                                                             >  2:5176945/1‑150 (MQ=255)

                                                         tttGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAAACCGCTCCAACA‑AAGGTTAATGTCCGACAGTAGGAGCGGGTTTAACCGCGAAGATGCCGGcatggc                                                                                             >  1:7014720/1‑146 (MQ=255)

                                                         tttGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCGCGTAGCGGCTTAACCCGCTCCGACA‑AACGGTAATGTGCGACTGTAGGAGCGGGTTTTAACGCGACGAGGCCGGcacacg                                                                                             >  1:5585884/1‑148 (MQ=255)

                                                                tCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTATTGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAatcac                                                                                      <  2:6680119/150‑1 (MQ=255)

                                                                   aTGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCCGGTAAAACCCCACCAACA‑ACGGTTAATTTGCGACGGTATGAGCGGGTTTTCCCCCGCAGAGGGCGGCACACGCaaaaaaaaa                                                                                   >  1:4050339/1‑143 (MQ=255)

                                                                        ggcATGACCCGCAAGATGATCTATACCTGAGCACGTTGTTTAACCGGCGCCGGCCTCTTCGCGGCTAAACCCGCGCCTACA‑ACGGTTAATGACCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGtt                                                                              <  2:2550636/150‑1 (MQ=38)

                                                                           aTGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑CCGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGcc                                                                           <  2:1299865/150‑1 (MQ=255)

                                                                               cccGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCtttt                                                                       <  2:6402528/150‑1 (MQ=255)

                                                                                ccGCAAGATTATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCttttt                                                                      <  1:8055789/150‑1 (MQ=255)

                                                                                ccGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCttttt                                                                      >  2:8578149/1‑150 (MQ=255)

                                                                                ccGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTAGCGGCTAAAACCCCTCCAACA‑ACGGTTAAAGTAAGACAGTAGGAGCCGGTATAACCGCCAAGACGCCGGCACAGGCAAACAAAACACGAAGCCatttt                                                                      >  2:2341868/1‑150 (MQ=255)

                                                                                ccGCAAGATGATATATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGTTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCttttt                                                                      <  1:8616245/150‑1 (MQ=255)

                                                                                  gCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAAACCGCTCCTAAA‑ACGGTTAAAGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAAAACATCACGTTGCCTTTTTGa                                                                    >  2:4699304/1‑150 (MQ=38)

                                                                                   cAAGATGATCTATACCTGAGCACCTTTTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTATTGTCCGACTGTAGGAGGGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGaa                                                                   <  2:4056100/150‑1 (MQ=255)

                                                                                   cAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTTAAACCGCTCCTACA‑TCGGTTAATGTCCGACTGGAGGAGCGGGTTTACCGGCGAAGAGGCCGGCACAGGCAATGACATCACGGTGCCTTTTTGaa                                                                   >  2:6581250/1‑150 (MQ=38)

                                                                                   cAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGaa                                                                   <  1:8002836/150‑1 (MQ=255)

                                                                                   cAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCGACA‑ACGGTTAATGTCCGACGGTAGGAGCGGGTTTAACCCCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCGTTTTGaa                                                                   >  2:8353146/1‑150 (MQ=38)

                                                                                    aaGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCCCCCCTACA‑ACGGTTAATGTCCGACGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCATTTTGaaa                                                                  >  2:789965/1‑150 (MQ=255)

                                                                                      gatgatCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAAACCGCACCTACA‑ACGGTTAAAGTCCGACAGTAGGAGCGGGTTTAACCGCGAAGAGGCCGGCACAGGCAAACACAACACGTTGCCGTTTTTaaaaa                                                                >  2:193094/1‑150 (MQ=38)

                                                                                        tgatCTATACCTGAGCACCTTGTTTAACCGGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGTTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGaaaaaaa                                                              <  1:3605682/150‑1 (MQ=255)

                                                                                          atCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACACGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTAACCGCGAAGAGGCCGGCACAGGCAATCACAACACGTTTCCTTTTTGAAAAAAAtt                                                            >  2:4607142/1‑150 (MQ=255)

                                                                                             tataCCTGCGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGATAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTCGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCaa                                                         <  2:2985169/150‑1 (MQ=255)

                                                                                              ataCCTGACCACCTTTTTTAAACTGCGCCGGCCTCTTCGCGGATAAACCGGCTCCTACA‑ACGTTTAATGTCCGACTTTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAAt                                                        <  2:3189407/150‑1 (MQ=38)

                                                                                                  cTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAACCCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATgggg                                                    <  2:1616670/150‑1 (MQ=255)

                                                                                                  cTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCTGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATgggg                                                    <  2:2830154/150‑1 (MQ=255)

                                                                                                  cTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGGTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATgggg                                                    >  2:2151387/1‑150 (MQ=255)

                                                                                                          cTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAAACCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACAAAACGGTGCCTTTTTGAAAAAAAATAAATGGGGCAATTGAc                                            >  2:4201972/1‑150 (MQ=38)

                                                                                                           ttGTTTAAACTGCGCCGGCCTCTTCGCGGCTAACCCCGCGCCTACA‑ACGGTTACTGTCCGACTGTCGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACt                                           <  2:8390753/150‑1 (MQ=255)

                                                                                                           ttGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACAACACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACt                                           >  2:5029858/1‑150 (MQ=255)

                                                                                                             gTTTAAACTGCGCCGGCCTCTGCGCGGATAAACCCGCTCCTACA‑CCGTTTAATGTCCGACTGTAGGCGCGGGTTTACCCGCGACGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTa                                         <  2:3353620/150‑1 (MQ=39)

                                                                                                                   aCTGCGCCGGCCTCTTCGCGGCTAAAACCGCTCCAACA‑AAGGTTAATGTCCGACTGTAGGAGCGGGTTTAACCGCGAAGAGGCCGGCACAGGCAATCACAACACGTTGCCATTTTGAAAAAAAATAAATGGGGCTATATACTTAGCTTcc                                   >  2:7068642/1‑149 (MQ=37)

                                                                                                                    cTGCGCCGGCCTCTGCGCGGCTAACCCCGCTCCTACC‑CCGGTTACTGGCCGACTGGAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGc                                  <  2:5226565/150‑1 (MQ=38)

                                                                                                                     tGCGCCGGCCGCGTCGCGGCGAAACCCCCTCCTACA‑ACGGGTAATGTCCGCCGGTTGGGTCGGGTTTACCCCCGAAGAGGCCCGCCCACGCAAACACAACACGTTGCCGTTTTGAAAAAAATTCAATGGGGCGAATTACATAGCGTCggc                                 >  2:4656917/1‑148 (MQ=255)

                                                                                                                          cGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTg                            >  2:4001822/1‑150 (MQ=255)

                                                                                                                               tctTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTaa                       >  1:760545/1‑150 (MQ=255)

                                                                                                                               tctTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTaa                       >  1:4990582/1‑150 (MQ=255)

                                                                                                                               tctTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTaa                       <  2:7656723/150‑1 (MQ=255)

                                                                                                                                 ttCGCGGCTAAACCCGCTCCTACA‑CCGGTTAATGTCCGACTGTCGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAAt                     <  2:6738360/150‑1 (MQ=255)

                                                                                                                                 ttCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTCAGCTTCGCCACCTGCGTAAAt                     <  2:4872724/150‑1 (MQ=255)

                                                                                                                                 ttCGCGGCTAAACCCGCTCCTACA‑ACGGGTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAAt                     >  1:7405006/1‑150 (MQ=255)

                                                                                                                                    gcgGGTAAACCCGCTCCTACAGTCGGACATTAACCG‑TTGTAGGAGCGGGTTTAGCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTc                  >  2:5458290/1‑150 (MQ=18)

                                                                                                                                      ggCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTcgc                >  2:1001324/1‑150 (MQ=255)

                                                                                                                                        cTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCgg              >  1:5239281/1‑150 (MQ=255)

                                                                                                                                           aaCCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCt           >  1:1108405/1‑150 (MQ=255)

                                                                                                                                             ccggCTCCTCCA‑CCGTTTATTGTCCGACTGTTGGAGCGGTTTTACCGGCCACGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCa         <  1:4442280/147‑1 (MQ=255)

                                                                                                                                             cccGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCa         >  1:7775217/1‑150 (MQ=255)

                                                                                                                                             cccGCCCATACA‑CCGTTGAAGGCCCGACTGTAGCAGCGGTTTTACCCGCTAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCa         <  1:1745275/150‑1 (MQ=255)

                                                                                                                                             cccGATCCTACA‑ACGGTTATTGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCa         <  1:3569634/150‑1 (MQ=255)

                                                                                                                                              ccGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGGGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAg        >  1:5726806/1‑150 (MQ=255)

                                                                                                                                                  tCCTACA‑ACGGTTAATGTCCGACTTTAGGAGCGGTTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGaa    <  2:7374048/150‑1 (MQ=255)

                                                                                                                                                  tCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCCGCGaa    >  2:4276603/1‑150 (MQ=255)

                                                                                                                                                  tCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGaa    <  2:7040636/150‑1 (MQ=255)

                                                                                                                                                  tCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGaa    >  2:701267/1‑150 (MQ=255)

                                                                                                                                                  tCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGaa    <  1:3495764/150‑1 (MQ=255)

                                                                                                                                                   ccTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAg   >  1:3207684/1‑150 (MQ=255)

GCGGCCATGGTTGCCTGGTTGCTGTCACGCCAGGCGGCATTTGTCACCGGCCAGGAGTTTGTGGTCGATGGCGGCATGACCCGCAAGATGATCTATACCTGAGCACCTTGTTTAAACTGCGCCGGCCTCTTCGCGGCTAAACCCGCTCCTACA‑ACGGTTAATGTCCGACTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATCACATCACGTTGCCTTTTTGAAAAAAATTCAATGGGGCTATTGACTTAGCTTCGCCACCTGCGTAAATTTCGCGGCCTCAGCGAAGC  >  NC_002947/2276070‑2276367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`