BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,317,833	C→A	6.3%	R5S (AGG→AGT) ‡	PP_2034 ←	membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,317,833	0	C	A	6.3%	1323.7 / 46.8	395	R5S (AGG→AGT) ‡	PP_2034	membrane protein
Reads supporting (aligned to +/- strand): ref base C (165/204); new base A (13/13); total (178/217)
Fisher's exact test for biased strand distribution p-value = 6.85e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 405 total aligned reads displayed.

AAGCCTACGCCCAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGC  >  NC_002947/2317684‑2317981

  gCCTACGCCCAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCt                                                                                                                                                    <  1:6880622/150‑1 (MQ=255)

   ccTACGCCCAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTg                                                                                                                                                   >  2:670611/1‑150 (MQ=255)

     tACGCCCAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGgc                                                                                                                                                 >  1:6576930/1‑150 (MQ=255)

         cccAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGTCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCAc                                                                                                                                             <  1:8402689/150‑1 (MQ=255)

         cccAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCAc                                                                                                                                             >  2:4821312/1‑150 (MQ=255)

         cccAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCAGGGGCGCAc                                                                                                                                             <  2:4377287/150‑1 (MQ=255)

          ccAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACg                                                                                                                                            >  2:6450106/1‑150 (MQ=255)

          ccAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCAGGGGCGCACg                                                                                                                                            <  2:541522/150‑1 (MQ=255)

           cagcagGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACgg                                                                                                                                           >  2:4283001/1‑150 (MQ=255)

            agcagGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACgct                                                                                                                                          <  2:2303588/150‑3 (MQ=255)

             gcagGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCAGGGGCGCACgctg                                                                                                                                         <  2:7871993/150‑4 (MQ=255)

                  ccGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAggtg                                                                                                                                    <  2:3694311/150‑1 (MQ=255)

                   cGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAggtgg                                                                                                                                   <  2:2657842/150‑1 (MQ=255)

                   cGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAggtgg                                                                                                                                   >  1:6234610/1‑150 (MQ=255)

                     ggCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACTTGGCTTACGATGTGCAGGGCTGCATTTTGGGTCAGCTGCTTGGGGCCAGGGTGGGGCTTGTCGATACCTGTTGAACAGCGTGCGCCCGTGGCGCACGGCAAGgtggtg                                                                                                                                 <  1:2466698/150‑1 (MQ=255)

                     ggCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGgtggtg                                                                                                                                 <  1:8760824/150‑1 (MQ=255)

                       cagcaCGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGa                                                                                                                               <  2:5227427/150‑1 (MQ=255)

                         gcaCGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGaaa                                                                                                                             <  2:8651564/150‑1 (MQ=255)

                             gggCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTc                                                                                                                         >  1:2303091/1‑150 (MQ=255)

                              ggCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCg                                                                                                                        >  1:6481375/1‑150 (MQ=255)

                                cAGTAGCGCCGGGATCAGCATGATGTGCGCATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCt                                                                                                                      <  2:4477596/150‑1 (MQ=255)

                                      cgcCGGGATCAGCATGATGTGCACATGGCTGACAAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCgg                                                                                                                <  2:551502/150‑1 (MQ=255)

                                      cgcCGGGATCAGCATGAGGTGCACAGGGCTGACGAAGGGCCCGGCAGCAATTTGGGTCAGCTGCTTGGGGCCAGGGTGGGGCATGTCGATACCTGTTGAACCGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCgg                                                                                                                <  1:960363/150‑1 (MQ=255)

                                          gggATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAgg                                                                                                            >  1:8050071/1‑150 (MQ=255)

                                               cAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGcgccg                                                                                                       >  1:6701276/1‑150 (MQ=255)

                                                aGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGcgccgc                                                                                                      >  1:4512798/1‑150 (MQ=255)

                                                 gCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCcgcg                                                                                                     >  2:8008402/1‑150 (MQ=255)

                                                 gCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCcgcg                                                                                                     >  2:3398936/1‑150 (MQ=255)

                                                      atgTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCTGCGTGGGGCTTGTCGATACCTGTTGAACAGGGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAAc                                                                                                <  1:1876470/150‑1 (MQ=255)

                                                          gCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCggg                                                                                            <  2:8374282/150‑1 (MQ=255)

                                                           cacaTGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGc                                                                                           <  2:693466/150‑1 (MQ=255)

                                                            acaTGGCTGACGAAGTGCACGGCAGCATTTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACCGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCa                                                                                          <  1:1028442/150‑1 (MQ=255)

                                                            acaTGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCa                                                                                          >  2:92464/1‑150 (MQ=255)

                                                              aTGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACATGTTGAACAGCGAGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAgg                                                                                        >  2:3760569/1‑150 (MQ=255)

                                                                 gCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGa                                                                                     <  1:3474797/150‑1 (MQ=255)

                                                                       gAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTc                                                                               <  2:2697999/150‑1 (MQ=255)

                                                                       gAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTc                                                                               >  1:6755269/1‑150 (MQ=255)

                                                                         aGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGACCCGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAg                                                                             <  1:4434117/150‑1 (MQ=255)

                                                                         aGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAg                                                                             <  2:2874035/150‑1 (MQ=255)

                                                                         aGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAg                                                                             >  1:3604212/1‑150 (MQ=255)

                                                                         aGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAg                                                                             >  2:1452347/1‑150 (MQ=255)

                                                                         aGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAg                                                                             <  2:6012094/150‑1 (MQ=255)

                                                                         aGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAg                                                                             >  2:1268520/1‑150 (MQ=255)

                                                                          gTGCACGGCAGCATTTTGGTTCTGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAgg                                                                            <  1:7416143/150‑1 (MQ=255)

                                                                               cGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAAc                                                                       >  1:2654295/1‑150 (MQ=255)

                                                                                   agcaATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTgg                                                                   >  2:58943/1‑150 (MQ=255)

                                                                                     caATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGc                                                                 >  2:7363819/1‑150 (MQ=255)

                                                                                      aaTTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGcc                                                                >  2:749599/1‑150 (MQ=255)

                                                                                       aTTTGGGTCATCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGTAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCca                                                               <  1:5805038/150‑1 (MQ=255)

                                                                                         ttGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCcagc                                                             <  2:1830358/150‑1 (MQ=255)

                                                                                           gggTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACCGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCcagcag                                                           <  1:1671680/150‑1 (MQ=255)

                                                                                             gTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGAc                                                         >  1:4851913/1‑150 (MQ=255)

                                                                                             gTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGAc                                                         >  2:6291837/1‑150 (MQ=255)

                                                                                                 gcagcTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAAt                                                     <  2:2455384/150‑1 (MQ=255)

                                                                                                 gcagcTTGGGGCCAGCGTGGGGCATGTCGAGACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGGGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCACGCCGGGCAGGCGACCGTTCAGGACTACGTGGGCCGGCAGGCCaag                                                     >  1:4182030/1‑149 (MQ=255)

                                                                                                    gcTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGAc                                                  <  2:3860333/150‑1 (MQ=255)

                                                                                                    gcTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGAc                                                  <  2:3017975/150‑1 (MQ=255)

                                                                                                     cTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGAcc                                                 >  2:8501492/1‑150 (MQ=255)

                                                                                                     cTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGAcc                                                 >  2:200853/1‑150 (MQ=255)

                                                                                                      ttGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCa                                                >  1:3366574/1‑150 (MQ=255)

                                                                                                         gggCCAGCGTGGGGCATGTCTATCCCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCTATGACCAGGc                                             <  2:1911650/150‑1 (MQ=255)

                                                                                                         gggCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGc                                             <  1:510338/150‑1 (MQ=255)

                                                                                                           gCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGccc                                           <  2:2116661/150‑1 (MQ=255)

                                                                                                            ccAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGcccc                                          >  2:5308790/1‑150 (MQ=255)

                                                                                                             cAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCa                                         >  2:7227027/1‑150 (MQ=255)

                                                                                                                ggTGGGGCTTGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGaa                                      <  1:5181568/149‑1 (MQ=255)

                                                                                                                      gCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGcccc                                <  1:3150638/150‑1 (MQ=255)

                                                                                                                       cATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCg                               <  1:3651270/150‑1 (MQ=255)

                                                                                                                        aTGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGc                              <  1:399089/150‑1 (MQ=255)

                                                                                                                        aTGTCCATACATGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCCCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAAAGACCAGGCACAAGAAAGCCCCGc                              >  2:664295/1‑150 (MQ=255)

                                                                                                                             gATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATa                         <  1:2015675/150‑1 (MQ=255)

                                                                                                                             gATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATa                         <  1:6978158/150‑1 (MQ=255)

                                                                                                                                aCCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATAccc                      >  1:4707700/1‑150 (MQ=255)

                                                                                                                                aCCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATAccc                      <  1:7125775/150‑1 (MQ=255)

                                                                                                                                   tGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAAc                   >  2:3908312/1‑150 (MQ=255)

                                                                                                                                   tGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAAc                   >  1:614542/1‑150 (MQ=255)

                                                                                                                                    gTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACa                  <  2:3970491/150‑1 (MQ=255)

                                                                                                                                    gTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACa                  >  1:7309285/1‑150 (MQ=255)

                                                                                                                                      tGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAgg                <  2:106649/150‑1 (MQ=255)

                                                                                                                                       gAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGc               >  1:3837327/1‑150 (MQ=255)

                                                                                                                                         ttgccGTGCGCCAGGGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTg             >  1:7909816/5‑150 (MQ=255)

                                                                                                                                         aCAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTg             >  1:1101292/1‑150 (MQ=255)

                                                                                                                                         aCAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTg             <  1:1449086/150‑1 (MQ=255)

                                                                                                                                           aGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCCGGCGACCGTTCAGGACCACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCACCAGGCTGAt           >  1:831925/1‑150 (MQ=255)

                                                                                                                                           aGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGAt           <  1:5484980/150‑1 (MQ=255)

                                                                                                                                            gCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATg          <  1:7668625/150‑1 (MQ=255)

                                                                                                                                             cGTGCGCCAGGGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCATGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGAGGt         >  2:5780139/1‑150 (MQ=255)

                                                                                                                                             cGTGCGCCAGGGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGt         >  1:8581566/1‑150 (MQ=255)

                                                                                                                                             cGTGCGCCAGGGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGt         >  2:2351048/1‑150 (MQ=255)

                                                                                                                                              gTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGtt        <  1:462064/150‑1 (MQ=255)

                                                                                                                                               tGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTg       <  2:5021980/150‑1 (MQ=255)

                                                                                                                                                gcgcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTgg      <  1:2945694/150‑1 (MQ=255)

                                                                                                                                                gcgcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTgg      >  2:3215484/1‑150 (MQ=255)

                                                                                                                                                  gcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTgg                                                                   <  1:6306961/87‑1 (MQ=255)

                                                                                                                                                  gcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGgcc    >  1:5979836/1‑150 (MQ=255)

                                                                                                                                                  gcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGgcc    <  1:3915877/150‑1 (MQ=255)

                                                                                                                                                    cccTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGgccgc  >  2:1716487/1‑150 (MQ=255)

                                                                                                                                                    cccTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGgccgc  >  2:4964700/1‑150 (MQ=255)

                                                                                                                                                     ccTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCa                                                                              >  2:1375242/1‑73 (MQ=255)

                                                                                                                                                     ccTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCa                                                                              <  1:1375242/73‑1 (MQ=255)

AAGCCTACGCCCAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGC  >  NC_002947/2317684‑2317981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`