BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,317,835	T→G	6.9%	R5R (AGG→CGG) ‡	PP_2034 ←	membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,317,835	0	T	G	6.9%	1292.6 / 59.4	399	R5R (AGG→CGG) ‡	PP_2034	membrane protein
Reads supporting (aligned to +/- strand): ref base T (171/200); new base G (13/15); total (184/215)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.87e-01

Only 100 of 403 total aligned reads displayed.

GCCTACGCCCAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCG  >  NC_002947/2317686‑2317983

gCCTACGCCCAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCt                                                                                                                                                      <  2:2023/150‑1 (MQ=255)

 ccTACGCCCAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTg                                                                                                                                                     >  2:670611/1‑150 (MQ=255)

       cccAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCAc                                                                                                                                               >  2:4821312/1‑150 (MQ=255)

       cccAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCAGGGGCGCAc                                                                                                                                               <  2:4377287/150‑1 (MQ=255)

        ccAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACg                                                                                                                                              >  2:6450106/1‑150 (MQ=255)

        ccAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCAGGGGCGCACg                                                                                                                                              <  2:541522/150‑1 (MQ=255)

         cagcagGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACgg                                                                                                                                             >  2:4283001/1‑150 (MQ=255)

          agcagGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACgct                                                                                                                                            <  2:2303644/150‑3 (MQ=255)

           gcagGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCAGGGGCGCACgctg                                                                                                                                           <  2:7871993/150‑4 (MQ=255)

             agGCCGGGAAGCACGGGCAGTAGCGCCGGGATCAGCATTATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCTGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCAGGGGCGCACgctgtt                                                                                                                                         <  1:8448269/150‑6 (MQ=255)

               gCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAggt                                                                                                                                       >  2:3468647/1‑150 (MQ=255)

                 cGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAggtgg                                                                                                                                     <  2:2657842/150‑1 (MQ=255)

                 cGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAggtgg                                                                                                                                     >  1:6234610/1‑150 (MQ=255)

                   ggCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACTTGGCTTACGATGTGCAGGGCTGCATTTTGGGTCAGCTGCTTGGGGCCAGGGTGGGGCTTGTCGATACCTGTTGAACAGCGTGCGCCCGTGGCGCACGGCAAGgtggtg                                                                                                                                   <  1:2466698/150‑1 (MQ=255)

                       gcaCGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGaaa                                                                                                                               >  1:8769933/1‑150 (MQ=255)

                       gcaCGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGaaa                                                                                                                               <  2:8651564/150‑1 (MQ=255)

                          cGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCt                                                                                                                            >  1:6739523/1‑150 (MQ=255)

                           gggCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTc                                                                                                                           >  1:2303091/1‑150 (MQ=255)

                            ggCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCg                                                                                                                          >  1:6481375/1‑150 (MQ=255)

                              cAGTAGCGCCGGGATCAGCATGATGTGCGCATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCt                                                                                                                        <  2:4477596/150‑1 (MQ=255)

                                    cgcCGGGATCAGCATGATGTGCACATGGCTGACAAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCgg                                                                                                                  <  2:551502/150‑1 (MQ=255)

                                     gcCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCggg                                                                                                                 >  1:4352914/1‑150 (MQ=255)

                                      ccGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGa                                                                                                                <  2:496764/150‑1 (MQ=255)

                                       cGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAg                                                                                                               <  2:1741060/150‑1 (MQ=255)

                                             cAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGcgccg                                                                                                         >  2:5075299/1‑150 (MQ=255)

                                               gCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCcgcg                                                                                                       >  2:8008402/1‑150 (MQ=255)

                                                  tgatgTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCaa                                                                                                    >  1:6898024/1‑150 (MQ=255)

                                                    atgTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCTGCGTGGGGCTTGTCGATACCTGTTGAACAGGGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAAc                                                                                                  <  1:1876470/150‑1 (MQ=255)

                                                        gCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCggg                                                                                              <  2:8374282/150‑1 (MQ=255)

                                                        gCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCggg                                                                                              >  1:8161255/1‑150 (MQ=255)

                                                         cacaTGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGc                                                                                             <  2:693466/150‑1 (MQ=255)

                                                          acaTGGCTGACGAAGTGCACGGCAGCATTTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACCGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCa                                                                                            <  1:1028442/150‑1 (MQ=255)

                                                          acaTGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCa                                                                                            <  1:698033/150‑1 (MQ=255)

                                                          acaTGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCa                                                                                            >  2:92464/1‑150 (MQ=255)

                                                          acaTGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCa                                                                                            >  1:4478935/1‑150 (MQ=255)

                                                               gCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGa                                                                                       <  2:1375906/150‑1 (MQ=255)

                                                               gCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGa                                                                                       <  1:3474797/150‑1 (MQ=255)

                                                                   aCGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGt                                                                                   >  2:1833920/1‑150 (MQ=255)

                                                                     gAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTc                                                                                 <  2:2697999/150‑1 (MQ=255)

                                                                       aGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAg                                                                               >  2:1268724/1‑150 (MQ=255)

                                                                       aGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAg                                                                               <  2:6012094/150‑1 (MQ=255)

                                                                       aGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAg                                                                               <  2:2874035/150‑1 (MQ=255)

                                                                       aGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAg                                                                               >  1:3604212/1‑150 (MQ=255)

                                                                        gTGCACGGCAGCATTTTGGTTCTGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAgg                                                                              <  1:7416143/150‑1 (MQ=255)

                                                                           cACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACa                                                                           >  2:1919388/1‑150 (MQ=255)

                                                                             cGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAAc                                                                         >  1:2654295/1‑150 (MQ=255)

                                                                                 agcaATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTgg                                                                     <  2:3833827/150‑1 (MQ=255)

                                                                                 agcaATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTgg                                                                     >  2:58943/1‑150 (MQ=255)

                                                                                   caATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGc                                                                   >  2:7363819/1‑150 (MQ=255)

                                                                                    aaTTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGcc                                                                  >  2:749599/1‑150 (MQ=255)

                                                                                     aTTTGGGTCATCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGTAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCca                                                                 <  1:5805038/150‑1 (MQ=255)

                                                                                         gggTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACCGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCcagcag                                                             <  1:1671680/150‑1 (MQ=255)

                                                                                           gTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGAc                                                           >  2:6291837/1‑150 (MQ=255)

                                                                                           gTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGAc                                                           >  1:4851913/1‑150 (MQ=255)

                                                                                               gcagcTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAAt                                                       <  2:2455384/150‑1 (MQ=255)

                                                                                               gcagcTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAAt                                                       >  2:1016489/1‑150 (MQ=255)

                                                                                               gcagcTTGGGGCCAGCGTGGGGCATGTCGAGACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGGGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCACGCCGGGCAGGCGACCGTTCAGGACTACGTGGGCCGGCAGGCCaag                                                       >  1:4182030/1‑149 (MQ=255)

                                                                                                  gcTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGAc                                                    <  2:3017975/150‑1 (MQ=255)

                                                                                                  gcTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGAc                                                    <  2:3860333/150‑1 (MQ=255)

                                                                                                   cTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGAcc                                                   >  2:8501492/1‑150 (MQ=255)

                                                                                                    ttGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCa                                                  >  1:3366574/1‑150 (MQ=255)

                                                                                                       gggCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGc                                               <  1:510338/150‑1 (MQ=255)

                                                                                                         gCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGccc                                             <  2:3723607/150‑1 (MQ=255)

                                                                                                          ccAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGcccc                                            >  2:5308790/1‑150 (MQ=255)

                                                                                                           cAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCa                                           <  1:7933642/150‑1 (MQ=255)

                                                                                                           cAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCa                                           >  2:7227027/1‑150 (MQ=255)

                                                                                                              ggTGGGGCTTGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGaa                                        <  1:5181568/149‑1 (MQ=255)

                                                                                                               gTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGaaa                                       <  2:2139039/150‑1 (MQ=255)

                                                                                                                    gCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGcccc                                  <  1:3150638/150‑1 (MQ=255)

                                                                                                                     cATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCg                                 <  1:3651270/150‑1 (MQ=255)

                                                                                                                      aTGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGc                                <  1:399089/150‑1 (MQ=255)

                                                                                                                      aTGTCCATACATGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCCCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAAAGACCAGGCACAAGAAAGCCCCGc                                >  2:664295/1‑150 (MQ=255)

                                                                                                                           gATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATa                           >  2:1456542/1‑150 (MQ=255)

                                                                                                                           gATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATa                           <  1:2015675/150‑1 (MQ=255)

                                                                                                                            aTACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATAc                          >  2:5272624/1‑150 (MQ=255)

                                                                                                                                cTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGCGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCaa                      <  1:6594049/150‑1 (MQ=255)

                                                                                                                                 tGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAAc                     >  1:614542/1‑150 (MQ=255)

                                                                                                                                 tGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAAc                     >  2:3908312/1‑150 (MQ=255)

                                                                                                                                  gTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACa                    <  2:3970491/150‑1 (MQ=255)

                                                                                                                                  gTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACa                    >  1:7309285/1‑150 (MQ=255)

                                                                                                                                    tGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAgg                  <  2:106667/150‑1 (MQ=255)

                                                                                                                                     gAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGc                 >  1:3837327/1‑150 (MQ=255)

                                                                                                                                      aaCAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCt                >  1:8351037/1‑150 (MQ=255)

                                                                                                                                       aCAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTg               >  1:1101292/1‑150 (MQ=255)

                                                                                                                                       aCAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTg               <  1:1449086/150‑1 (MQ=255)

                                                                                                                                         aGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGAt             >  1:6795887/1‑150 (MQ=255)

                                                                                                                                         aGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGAt             <  1:5484980/150‑1 (MQ=255)

                                                                                                                                          gCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATg            <  1:7668625/150‑1 (MQ=255)

                                                                                                                                           cGTGCGCCAGGGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCATGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGAGGt           >  2:5780139/1‑150 (MQ=255)

                                                                                                                                           cGTGCGCCAGGGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGt           >  2:2351048/1‑150 (MQ=255)

                                                                                                                                            gTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGtt          <  1:7158624/150‑1 (MQ=255)

                                                                                                                                             tGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTg         <  1:4697570/150‑1 (MQ=255)

                                                                                                                                             ggcgcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTg         <  1:4606610/149‑1 (MQ=255)

                                                                                                                                              gcgcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTgg        <  1:2945694/150‑1 (MQ=255)

                                                                                                                                              gcgcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTgg        <  1:8632276/150‑1 (MQ=255)

                                                                                                                                              gcgcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTgg        >  2:3215484/1‑150 (MQ=255)

                                                                                                                                                gcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTgg                                                                     <  1:6306961/87‑1 (MQ=255)

                                                                                                                                                gcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGgcc      >  1:5979836/1‑150 (MQ=255)

                                                                                                                                                gcCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGgcc      <  1:3915877/150‑1 (MQ=255)

                                                                                                                                                   ccTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCa                                                                                <  1:1375242/73‑1 (MQ=255)

GCCTACGCCCAGCAGGCCGGGCAGCACGGGCAGTAGCGCCGGGATCAGCATGATGTGCACATGGCTGACGAAGTGCACGGCAGCAATTTGGGTCAGCAGCTTGGGGCCAGCGTGGGGCATGTCGATACCTGTTGAACAGCGTGCGCCCCTGGCGCACGGCAAGGTGGTGGAAAGCTCGCTTAGCGGGAGGCGCCGCGCAAACCGGGCAGGCGACCGTTCAGGACAACGTGGGCCAGCAGACCAATGACCAGGCCCCAGAAAGCCCCGCCAATACCCAACAGGCTGATGTTGGCCGCCG  >  NC_002947/2317686‑2317983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`