| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,417,896 | G→C | 7.2% | intergenic (+168/‑253) | rlmM → / → PP_2114 | 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,417,896 | 0 | G | C | 7.2% | 838.7 / 40.6 | 265 | intergenic (+168/‑253) | rlmM/PP_2114 | 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase |
| Reads supporting (aligned to +/- strand): ref base G (131/115); new base C (9/10); total (140/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 290 total aligned reads displayed.
CTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCC > NC_002947/2417747‑2418044 | cttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatg < 1:2549060/150‑1 (MQ=255) ttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatgg > 2:2654077/1‑150 (MQ=255) gcgtctgcgtctGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatggatgg < 1:102070/150‑1 (MQ=255) gcgtctgcgtctGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatggatgg < 1:7064431/150‑1 (MQ=255) gcgtctgcgtctGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatggatgg > 1:5008145/1‑150 (MQ=255) cgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATCCATGGGGCCtca < 1:6494079/150‑3 (MQ=255) cgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATCCATGGGGCCtca < 2:4964064/150‑3 (MQ=255) cgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATCCATGGGGCCtca < 1:8619630/150‑3 (MQ=255) gtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGCAGGCCCCATCCATGGGGCCtca < 2:2206182/150‑3 (MQ=255) gtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCa < 1:8395614/150‑1 (MQ=255) gtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCa < 2:4010167/150‑1 (MQ=255) ctgcttctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAgc < 1:2900368/150‑1 (MQ=255) gcttctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAgcgc < 2:1456655/150‑1 (MQ=255) ttctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGCAGGCCCCATCCATGGGGCCT‑CAgcgctt < 2:6000214/150‑3 (MQ=14) ttctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑t > 2:2839479/1‑150 (MQ=255) ttctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑t > 1:140024/1‑150 (MQ=255) tctgcttTTGCTGTAGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑Ta > 2:2708710/1‑150 (MQ=255) ttttGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTccc > 2:5341407/1‑150 (MQ=40) ttGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCgg < 1:3326249/150‑1 (MQ=38) gCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGCGa < 1:6502659/150‑1 (MQ=37) cTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAg < 1:5466049‑M2/150‑2 (MQ=255) gTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAgca < 1:7906912‑M2/150‑4 (MQ=255) ttCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAgcaagccc < 1:4147102‑M2/150‑9 (MQ=255) cTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCgg > 2:4723481/1‑150 (MQ=38) tAAGCGCGCGATAGGTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGa < 2:4670514/150‑1 (MQ=38) cgcgcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGa < 2:1938236/150‑1 (MQ=38) cgcgcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGa < 2:5389856/150‑1 (MQ=38) cgcgTTCGTTCAGGCGACGCAGATTGCGACTTCTGGAGGCCGAGCGTAGGGCTTGCGATGGGTGGTGAGGGGCATGGTTGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAgg < 1:6819419/150‑1 (MQ=11) gATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGaa > 1:5768237/1‑150 (MQ=37) gATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGaa > 2:2602711/1‑150 (MQ=37) atatTTCAGGCGACTCAGATTGCTAATTCATGAGGCCGAGCTTAGGGCTTGCGAAGGGAGGTGACGGGAATGTATGCCATTAAAGCGCTC‑AGGCCCCATGTATGGGGCATGCAGCGCT‑TACACCCGGGAGAAAGCCCGGAGCGAGGGAAc < 2:1568024/150‑1 (MQ=14) gTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAAcccc > 1:100762/1‑150 (MQ=37) ttCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCg > 1:7770036/1‑150 (MQ=37) ccggCGACGCAGTTGGCGACTTCCGGAGGCCGCGGGTTGGGCTTGCGATGGGAGGTGACGGGCTTGGTTGCCCGTCACGCGCTG‑CGGCCCCATGGATGGGGCCTGCAGCGCT‑TACTCCCGGGAGCACGCCCGGAGCGAGGGAACCCCGGa < 2:3334610/148‑1 (MQ=11) gCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAgcg > 2:2537159/1‑150 (MQ=37) aGATTGCGACTTCAGGAGGCCGAGCGTTGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCa < 2:5075742/150‑1 (MQ=37) gCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCACGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGc < 2:3541509/150‑1 (MQ=37) gACTTCAGGAGGCCGTGCGTTGGGCTTGCGACGGGCGGTGACGGGCATGTTTGCCCGTCAAGCGCTG‑AGGCCCCTTGGATGGGGCCTGCAGCGCT‑TACACCCGGGAGAAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCg < 2:7452028/150‑1 (MQ=11) ttCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGgat > 1:3251839/1‑150 (MQ=37) cAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatggatgg > 2:2405184/1‑77 (MQ=34) aggaggCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGgatgat > 2:4560009/1‑150 (MQ=37) gaggCCGAGCGTAGGGCGTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑CGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAg < 2:8234423/150‑1 (MQ=255) aGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCa < 2:714064/150‑1 (MQ=39) gcgcAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAgcaagccctgcgctcggcctcctgaagtcgcaatccgcggcgcctgggctatcgcgcgctt < 1:3112256‑M2/150‑62 (MQ=255) ctttgggCTGGCGACGGGTGGTGCCGGGCTTGGATGCCCGTAACGCGCTG‑AGCCCCCATGGTGGGGGCCGGCTGCGCG‑TACTCCGGGGAGCAAGCCCGGTGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGc < 1:7911206/146‑1 (MQ=11) gcattgcgGAGGGAGATGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TGCTCCCGGGAgcaaggcctccactcggcctcctgaagtcgcaatctgcgtcgcctggactaccgcgcgctttgaag < 1:4628106‑M2/147‑67 (MQ=255) cTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGtttttt < 2:7537548/150‑1 (MQ=39) ggCGACGGGTGGTGCGGGGCTTGGAGGCCCGTCACGCGCTG‑CGGCCCCTTGGCTGGGGCCTGCAGCGCT‑TACGCCGGGGCGCACGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTgg < 1:4302252/149‑1 (MQ=14) cGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGtt > 2:1519958/1‑150 (MQ=39) gAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAgcaagccctacgctcggcctcctgaagtcgcaatctgcgtcgcctgaactatcgcgcgcttagaagcaacagc < 2:5978744‑M2/150‑74 (MQ=255) gAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTa > 1:3428687/1‑150 (MQ=39) gAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTa > 2:1857320/1‑150 (MQ=39) tggTGACGGGCATGGATGCCCTTCAAGCGCTG‑AGGCCCCTTGGTTGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACttttt < 2:916022/149‑1 (MQ=255) aGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACttttt < 2:8711657/150‑1 (MQ=39) aGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACttttt < 2:7742714/150‑1 (MQ=39) aGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAgcaagccctgcgctcggcctcctgaagtcgcaatctgcgtcgcctgaactaccgcgcgcttagaagcaaaagccaaagca < 1:5937522‑M2/150‑81 (MQ=255) cttGACGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTg > 1:5619658/3‑150 (MQ=255) gTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTg < 2:1562165/138‑1 (MQ=40) gTGACGGGCATGGATGCCCGTCAAGCGCTG‑‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAgcaagccctgcgctcggcctcctgaagtcgcaatctgcgtcgcctgaactaccgcgcacttagaagcaaaagcaaaagcaac < 2:7171566‑M2/150‑83 (MQ=255) tGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTc > 1:5785713/1‑150 (MQ=39) tGACGGGCATCCATGCCCGTCAAGCGCTG‑‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAgcaagccctgcgctcggcctcctgaagtcgcaatctgcgtcgcctgaactaccgcgcgcttagaagcaaaagccaaagcaaga < 2:7789225‑M2/150‑84 (MQ=255) gACGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCAGGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTcg > 2:4923015/1‑150 (MQ=255) gggCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGt > 1:880367/1‑150 (MQ=39) gggCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGt < 1:7331677/150‑1 (MQ=39) gggCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGt > 2:7331677/1‑150 (MQ=39) gggCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGt > 1:1465018/1‑150 (MQ=39) gcttGGTTGCCCGTCAAGCGCTG‑AGGCCCCATGGTTGGGGCCTGCAGCGCG‑TACTCCGGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGttt < 2:6682423/147‑1 (MQ=255) aTGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGa > 1:2264501/1‑150 (MQ=39) aTGGATGCCAGTCAAGCGCTG‑AGGCCCCATGGATGGGGCATGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACACCGGAGCGTAGCGCAGGGGCCGGATGTTAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGa > 2:3480082/1‑150 (MQ=255) tGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGAc < 2:6412550/150‑1 (MQ=39) ggATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACa > 2:2059657/1‑150 (MQ=39) ggATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACa > 2:1140926/1‑150 (MQ=39) ggATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACa > 1:7574247/1‑150 (MQ=39) gATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCACGTTTGACaa > 2:4180602/1‑150 (MQ=255) aTGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaa > 1:3791653/1‑150 (MQ=39) tGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaa > 1:5097859/1‑150 (MQ=39) gCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa > 2:7411039/1‑150 (MQ=39) gCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa > 2:8359998/1‑150 (MQ=39) cGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTg > 2:3878297/1‑150 (MQ=39) tgcgcTG‑TGGCCCCTTGGAGGGGGCCTGCAGCGCT‑TACCCCCGGGAGCACCCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccg < 1:6290135/149‑1 (MQ=14) gcgcTGCAGGCCCCATCCATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccg > 1:899540/1‑150 (MQ=255) gcgcTGCAGGCCCCATCCATGGGGCCT‑CAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCGGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccgc > 1:6107722/1‑150 (MQ=14) cgcTG‑CGGCCCCCTGTTGGGGGCCGGCCGCGCG‑TACGCCCGGGAGAACGCCCGGCGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccgcc < 1:7816326/150‑1 (MQ=14) gcTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACccgccg > 2:6856017/1‑150 (MQ=39) tgcaGGCCCCATCCATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGt > 1:1569719/4‑150 (MQ=255) aGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAg > 2:8054110/1‑150 (MQ=39) aGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAg > 1:1901510/1‑150 (MQ=39) ggCCCCATCCATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGAc < 1:6564295/139‑1 (MQ=255) ggCCCCATCCATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGAc > 2:6564295/1‑139 (MQ=255) gCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAggg > 1:6969668/1‑150 (MQ=39) gCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAggg > 1:7656545/1‑150 (MQ=39) ccATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGcga > 1:5249022/1‑148 (MQ=255) ccATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGa < 2:5586461/88‑1 (MQ=38) cATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 2:627914/1‑150 (MQ=255) cATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 2:5822095/1‑150 (MQ=255) cATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 1:5356096/1‑150 (MQ=255) cATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCAt > 2:4809093/1‑150 (MQ=255) atggatggGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATc > 2:3135407/1‑150 (MQ=255) atggatggGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATc > 1:3645341/1‑150 (MQ=255) tggatggGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATcc > 1:3385277/1‑150 (MQ=255) | CTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACCCGCCGTAAGGGCCATCC > NC_002947/2417747‑2418044 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |