| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,461,047 | C→G | 6.4% | A257G (GCC→GGC) | gapB → | glyceraldehyde‑3‑phosphate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,461,047 | 0 | C | G | 6.4% | 1165.1 / 49.6 | 346 | A257G (GCC→GGC) | gapB | glyceraldehyde‑3‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (149/175); new base G (11/11); total (160/186) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 | |||||||||||
Only 100 of 353 total aligned reads displayed.
CACCATCACTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCATCGTGCCGGTGC > NC_002947/2460898‑2461196 | cATCACTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTg > 1:6651421/1‑150 (MQ=255) tCACTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGcc > 1:5472876/1‑150 (MQ=255) tCACTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGcc > 1:4325861/1‑150 (MQ=255) aCTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCg > 1:6917429/1‑150 (MQ=255) aCTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCg < 1:8706123/150‑1 (MQ=255) cTGCCACCGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCgg < 1:3250478/150‑1 (MQ=255) cTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCgg < 1:4174209/150‑1 (MQ=255) cTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCgg < 2:3362504/150‑1 (MQ=255) tGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCggg < 1:426064/150‑1 (MQ=255) tGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCggg < 2:209642/150‑1 (MQ=255) gCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGt < 2:964150/150‑1 (MQ=255) gCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGt < 2:2355760/150‑1 (MQ=255) ccAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGtg < 2:1892162/150‑1 (MQ=255) ccAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGtg < 1:7425844/150‑1 (MQ=255) ccAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGtg < 2:267774/150‑1 (MQ=255) cAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGG‑CAGCACCCGGGCAGGCCAGGTGCT‑Ggccca < 2:5880833/150‑3 (MQ=255) aaCCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCcgc > 1:2744324/1‑150 (MQ=255) aaCCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCcgc > 1:7808831/1‑150 (MQ=255) ccTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGt < 1:7299563/150‑1 (MQ=255) ccTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGt < 1:1890547/150‑1 (MQ=255) cTGATCCCGGTTATCTACGCCCCGAGCCCTAGCGAAGTCGACGACACCCCGTACGGCCTCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑Gcccaggcc < 2:2693607/150‑6 (MQ=255) cTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑Gcccaggcc < 2:1141320/150‑6 (MQ=255) ctCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATc < 2:7700174/149‑1 (MQ=255) aTCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATc < 1:44188/150‑1 (MQ=255) aGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCa < 2:4082415/150‑1 (MQ=255) ggTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCCGGGCAGGCCAGGtgc > 1:5180818/1‑132 (MQ=255) gTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCAcc < 1:7537258/150‑1 (MQ=255) gTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCAcc < 1:6571585/150‑1 (MQ=255) tCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCAc < 2:6017113/150‑1 (MQ=255) cTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCAcc > 2:7477933/1‑150 (MQ=255) tACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCt > 1:4078722/1‑150 (MQ=255) aCGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTg > 2:8494589/1‑150 (MQ=255) aaGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTAGGCCAGGTGCTGGcccag > 2:4419165/1‑108 (MQ=255) cccTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGgcgc < 1:6091214/150‑1 (MQ=255) cTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCACGGgcgcgc > 1:358394/1‑150 (MQ=255) cTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGgcgcgc > 1:7903257/1‑150 (MQ=255) cTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGgcgcgc < 1:2157722/150‑1 (MQ=255) tAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCt > 2:1305771/1‑150 (MQ=255) aGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTg > 1:2887612/1‑150 (MQ=255) cGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTgaa > 1:4437470/1‑150 (MQ=255) gACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATc < 1:5997607/150‑1 (MQ=255) gACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATc < 2:4624185/150‑1 (MQ=255) gACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATc > 1:5559691/1‑150 (MQ=255) cTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGt < 1:1108749/150‑1 (MQ=255) tACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTg < 2:8161892/150‑1 (MQ=255) acCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCAc > 2:5183186/1‑150 (MQ=255) acCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCAc > 2:2508997/1‑150 (MQ=255) cccAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACg < 2:3087889/150‑1 (MQ=255) ccAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACgg > 2:8716051/1‑150 (MQ=255) gTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTAt > 2:5369266/1‑150 (MQ=255) aTCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCAc > 1:8205246/1‑150 (MQ=255) tCGACGATGAGCGCATTGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACg > 1:3378769/1‑150 (MQ=255) tCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACCTCGTGCACGGTATCAACCACg > 2:4643209/1‑150 (MQ=255) tCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACg > 1:1003673/1‑150 (MQ=255) cGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACgg < 1:4746214/150‑1 (MQ=255) gACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGt < 1:1986491/150‑1 (MQ=255) gACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGt > 1:6867981/1‑150 (MQ=255) gACAATGCGCTCATCGTCGACAACACCGGAGTATGGCGTGACGCCGACGGCCTGGGCCATCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGt < 1:1021079/150‑1 (MQ=255) aCAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGTT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTg < 2:5915863/150‑1 (MQ=255) aCAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTg < 2:1670582/150‑1 (MQ=255) aCAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTg < 1:5645536/150‑1 (MQ=255) aCAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTg < 2:8049778/150‑1 (MQ=255) cAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGa < 2:3571554/150‑1 (MQ=255) aaTGCTCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGat < 1:8051015/150‑1 (MQ=255) cTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACt < 1:8408777/150‑1 (MQ=255) tCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTg > 1:6488376/1‑150 (MQ=255) cATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCACGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGAGATATCACTGc > 2:3480706/1‑150 (MQ=255) gtcgACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGAt < 1:8751572/150‑1 (MQ=255) gtcgACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGAt < 1:1712460/150‑1 (MQ=255) gtcgACAACACCGGCGTATGGCATGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGAt < 2:6279718/150‑1 (MQ=255) tcgACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATg > 1:5031752/1‑150 (MQ=255) tcgACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATg > 2:4977402/1‑150 (MQ=255) gACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGAc > 1:2680044/1‑150 (MQ=255) caacaCCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACaa < 2:2899487/150‑1 (MQ=255) cGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGt > 1:5853267/1‑112 (MQ=255) ggCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGatcatc < 2:4165875/150‑1 (MQ=255) gTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTcg > 2:7135240/1‑150 (MQ=255) aTGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTcggc < 2:7975190/150‑1 (MQ=255) ggCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTcggcgg > 2:3826175/1‑150 (MQ=255) tGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGcctc < 2:6309216/150‑1 (MQ=255) tGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGcctc < 1:1472361/150‑1 (MQ=255) tGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGcctc < 2:2820078/150‑1 (MQ=255) tGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGcctc > 1:3147762/1‑150 (MQ=255) cGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGcac < 1:4783345/150‑1 (MQ=255) ccTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCaa < 2:6656113/150‑1 (MQ=255) ggcAGCACCCGGGCAGGCCAGGTGCTGGCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGcc > 2:6390110/3‑150 (MQ=255) gcAGCACCCGGGCAGGCCAGGTGCTGGCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCa > 2:700128/2‑150 (MQ=255) ccAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCAt > 2:1535268/1‑150 (MQ=255) ccAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCAt < 2:1759105/150‑1 (MQ=255) ccAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCAt < 2:4760404/150‑1 (MQ=255) cAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCATc > 2:5787911/1‑150 (MQ=255) cAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCATc < 2:5701568/150‑1 (MQ=255) aCCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCATCGTGc < 2:6241715/150‑1 (MQ=255) aCCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCATCGTGc < 1:2813035/150‑1 (MQ=255) cTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGa > 1:7336212/1‑89 (MQ=255) cTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGa < 2:7336212/89‑1 (MQ=255) ggCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGa < 1:3864749/87‑1 (MQ=255) ggCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCATCGTGCCGGt < 2:3667704/150‑1 (MQ=255) ggCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCATCGTGCCGGt > 2:4308820/1‑150 (MQ=255) gCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCATCGTGCCGGTg > 2:6815926/1‑150 (MQ=255) | CACCATCACTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCGCGTGATCCTCACCGCACCTGGCAAGGGCGCGCTGAAGAACATCGTGCACGGTATCAACCACGGTGATATCACTGCCGATGACAAGATCATCTCGGCGGCCTCCTGCACCACCAACGCCATCGTGCCGGTGC > NC_002947/2460898‑2461196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |