| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,461,853 | T→G | 6.3% | intergenic (+112/‑69) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,461,853 | 0 | T | G | 6.3% | 641.8 / 23.3 | 210 | intergenic (+112/‑69) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (84/108); new base G (4/10); total (92/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.90e-01 | |||||||||||
Only 100 of 219 total aligned reads displayed.
GGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCG > NC_002947/2461708‑2462002 | ggCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATc < 1:8343460/150‑1 (MQ=255)ggCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATc < 2:375415/150‑1 (MQ=255) tGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCt < 2:3813350/150‑1 (MQ=255) gtgtGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGc < 2:5171381/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:840892/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 2:862074/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:842027/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:662453/150‑1 (MQ=255) gAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCt < 1:6878155/150‑1 (MQ=255) aaCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGTTATCGCTGccccgg > 1:6378820/1‑148 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 1:1025613/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 1:30311/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGAGCCGGCCCTTTCGCGGGTTAACCCGCGCCAACACGCTTATAGCTGccccagg > 1:455375/1‑147 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTTTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCAC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTa < 1:7234646/150‑1 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCCCTACAACACGGTTATAGCATCCCCAGTAg > 1:3901228/1‑150 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAg < 1:7388541/150‑1 (MQ=255) ccGCCAGCGTGTCCACGCTGATTCGCTTGTAAGGCCATGAAAAAACGGGCACCGTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAg < 1:678632/150‑1 (MQ=255) ccAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAg > 2:3431026/1‑150 (MQ=255) ccAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGGGAAACCGCGCCGACAGGAGTATCGCTGCCCCCGTAgggg > 1:224868/1‑148 (MQ=255) aGCGTTTCCACGCTTATTCGCTTTTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTGTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGc < 2:2733915/150‑1 (MQ=255) aGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCg > 2:1185346/1‑150 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGGATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 1:4762639/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 2:4348116/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 1:2592521/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCgg > 2:2640390/1‑150 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑GTTTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCgg < 1:6328012/150‑1 (MQ=25) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCGCTCCGACAGGATTATCGCAGCCCCAGTTGGAGCggg > 2:751846/1‑150 (MQ=39) gTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGt < 1:2121706/150‑1 (MQ=255) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGCACCTTCGGGGTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAc < 2:5239031/150‑1 (MQ=255) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTAc < 1:3230289/150‑1 (MQ=25) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAc < 2:847673/150‑1 (MQ=255) ccACGCTGAGTCGCTTGTAAGGCACTGCAACAACGGGAACCGTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAAGGTGTGTTGTCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTCCAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAc < 2:7455426/150‑1 (MQ=38) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGCTGATCGCAGCCCCGGTAGGAGCGGGTTTAcc > 2:7013164/1‑150 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc < 1:588941/150‑1 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATAGCTGCCCCTGTAGGAGCGGGTTTAccc > 2:7542761/1‑150 (MQ=255) gctgctGCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCcgc < 1:6477947/150‑1 (MQ=255) gATTCGCTTGTACGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGaa < 2:1991929/150‑1 (MQ=255) aTTCGCTTGTAAGGAAATGAAAAAACGGTAACCTTCGGTTTCCC‑T‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGaaa < 2:1611594/150‑2 (MQ=18) ttCGCTTGTAAGGCAATGAAAAAACGGGACCCTTCGGGTTCCC‑T‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAaga < 2:5010016/150‑1 (MQ=255) tgcGCTTGTAAGGCATTGAAAAAACGGGAACCTTCGGGTACCC‑G‑TTTTTTT‑TTATTCTGACTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTTGGTGCGGGTTTACCCGCGAaga < 2:6576902/148‑1 (MQ=39) tAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCa > 2:8542981/1‑150 (MQ=255) tAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCGACAGGGTTATCGCTGCCCCTGGAGGAGCGGGTTTACCCGCGCACGGGCCAGCa > 2:5526407/1‑150 (MQ=38) gCAATTAAAAAACGGGAACCTTCGGGTTCCCTT‑TTTTTTT‑TTATTCTTATTGTTTGTTGTCTGTGCCGGCCCTTTCGCGGTTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCg < 2:332793/150‑1 (MQ=37) aaTGAAAAAACGGGAACCTTCGGGTTCCC‑GTTTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGc > 2:680597/1‑150 (MQ=255) aaaaaaaaaCGGGAACCCGAAGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCGCGCCGACAGGGGTATAGCTGCCCCGGGAGGGGGGGGGTTTCCCCCGGAGCGGCCCGCCCCgggca > 1:1116782/4‑147 (MQ=255) aaaaaCGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCga > 1:2895297/1‑150 (MQ=255) aaaaCGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCt > 1:6941502/1‑105 (MQ=255) aaaaCGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCt < 2:6941502/105‑1 (MQ=255) aaaCGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCgaga < 2:654074/150‑1 (MQ=255) aaaCGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGGAAAACCCCGCCTACAGGATTATAGCTGCCCCAGTAGGTGGGGGTTTACCCCGGCCGAGGGCACCACCCGCAAccccga > 1:4467219/1‑146 (MQ=255) aaCGGGAACCCGAAGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGaa > 2:4247738/1‑150 (MQ=255) aCGGGAACCCGAAGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGAGGGTTTAACCCCGAAGAGGCCAGCACCGGCAAccccgaac > 2:2929919/1‑144 (MQ=38) gggACCCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCGACGACAGGATTATCGCTGCCCCGGTCGGCGCGGGGTTACCCGCGAAGAGGCCCGCACCGGCCACCGCGAAccc > 2:184213/1‑150 (MQ=37) gggAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAcc > 2:2112629/1‑150 (MQ=255) gTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCAACACGAATATCCCAGCCCCCGGACGACCCGGGTTACCCCCCAAGAGGCCCCCACCCGCAACCCAGCAACCCAACAGGgcgcc > 2:4459054/1‑149 (MQ=19) gTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCAACAGGATTATAGCAGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCAACTGTgcgcc > 2:4697553/1‑149 (MQ=38) tttttt‑ttATTCTTATTGTGTGTTTTCTGGGCGGGCCCTTGCGGGGTTAACCCCGCTCCTCCAGGTTTTGCGCTGCCCCTTTAGGTGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTa < 1:1618216/150‑1 (MQ=255) tttttt‑ttATTCTGATTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTa < 2:359238/150‑1 (MQ=255) tttt‑ttttTCTGAATGTGTGTTGTCTGTGCCGGCCCTTTCGCGGTTAAACCCGCTCATACCGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACt < 1:8769180/150‑1 (MQ=39) tttt‑ttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACt < 2:1614218/150‑1 (MQ=255) tttt‑ttATACTGAAGGTGGGTTGTCAGTGCCGGCCATTACGCGGGTAAACCCGCTCCAACCGTTTTATCGCTGCCCCGGTAGGCGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACt < 1:4338145/150‑1 (MQ=37) ttt‑ttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTg > 2:7201861/1‑150 (MQ=255) tgtgtgTTGTCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCATCCTGTTTTATCGCTGCCCCTGTTGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCtgctgc < 1:3395158/150‑1 (MQ=38) tgtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTa < 1:5861383/150‑1 (MQ=255) gttgtCAGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCGACAGGATTATAGCTGCCCCGGGAGGAGCGGGTTTTCCCGCGAAGAGGCCAGCCCCCGCAACCGAGAAACCCGACAGTGCGCACAGCCCGACTGTTCATTCTGCGGCTACTc > 2:3131677/1‑150 (MQ=255) ttgtCAGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTAATGTTCATTCTGCTGCTACTCa > 2:2582498/1‑150 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTTTTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCt < 2:1053422/150‑1 (MQ=255) tGCCGGCCCTTTCGCGGGTTAACCCCCTCCGACAGGATTATCGCTGCCCCGGTAGGGGCGGGTTTACCCGCGAAGAGGCCAGCCCCGGCAACCCAGAAACCCGACTGTGCGCACACCCCTACTGTTCATTCTGCTGCTACTCACCGccgg > 2:6104919/1‑148 (MQ=38) cGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCaa < 2:7665707/150‑1 (MQ=255) ccTTTCGCGGTTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGTAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 2:2452953/150‑1 (MQ=255) tttCGCGGGTAAACCCCCTCCAACACGAATATCGCATCCCCAGTAGGAGCCGGTTTACCCGCGAAGAGGCCAGCACCGGCAAACGAGAAACCCAACAGTGCGCACAGCCCGACTGTTCATTCTGCTGCTACTCACCCCCTGCAACCaacg > 2:107274/1‑148 (MQ=37) ttCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc > 1:3577959/1‑150 (MQ=255) cgGGCAACCCCGCTCCTCCTCGATTATCGCCGCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCa < 1:1958739/150‑1 (MQ=39) ggTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAcc > 1:465878/1‑150 (MQ=255) gTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAccc > 1:1779832/1‑150 (MQ=255) aCCCGCTCCTACTGGTTTAGCGCGCCCCCTTTAGGCGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 1:3054626/150‑1 (MQ=255) aCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 1:7857525/150‑1 (MQ=255) cccGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAg > 1:8025103/1‑150 (MQ=255) ccGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:2147707/1‑150 (MQ=37) ccGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:3095751/1‑150 (MQ=255) cTCCTACCGGATTATCGCGGCCCCTGTCGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGcc < 1:859436/150‑1 (MQ=255) cTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGcc > 2:7839023/1‑150 (MQ=255) cTCCAACGGTATTCTCGCGGCCCCTGTTGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGcc < 1:751846/150‑1 (MQ=255) tCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa > 2:8800355/1‑144 (MQ=255) tCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 1:8800355/144‑1 (MQ=255) tCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCt > 2:4889415/1‑150 (MQ=255) cTACTGGATTATCGCTGCCCCTTTTGGTGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 1:3431026/150‑1 (MQ=255) tACCGGATTATCGCGGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTCCTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg < 1:2795552/150‑1 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 1:5141439/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:4051195/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:3961548/1‑150 (MQ=255) cAGTATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg < 1:5670901/150‑1 (MQ=255) aGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtgg < 1:8537992/150‑1 (MQ=255) gATTATCGCTGCCCCTGTTGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCACCACCCAGGCGCTCCAGggtgggg < 1:7677746/150‑3 (MQ=255) gATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc > 2:6757813/1‑150 (MQ=255) aTTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTcc < 2:455375/150‑1 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCAGCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:5482849/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 1:4619698/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:7310790/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 1:1689242/1‑150 (MQ=255) | GGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCG > NC_002947/2461708‑2462002 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |