| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,461,854 | T→C | 5.7% | intergenic (+113/‑68) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,461,854 | 0 | T | C | 5.7% | 657.3 / 18.1 | 210 | intergenic (+113/‑68) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (88/108); new base C (2/10); total (92/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.25e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.16e-01 | |||||||||||
Only 100 of 220 total aligned reads displayed.
GGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGA > NC_002947/2461708‑2462003 | ggCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATc < 1:4516191/150‑1 (MQ=255)ggCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATc < 2:375415/150‑1 (MQ=255)ggCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATc < 1:8087510/150‑1 (MQ=255)ggCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATc < 1:8343460/150‑1 (MQ=255) tGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCt < 2:3813350/150‑1 (MQ=255) ggTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTg < 2:2374700/150‑1 (MQ=255) gtgtGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGc < 2:5171381/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:840892/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 2:862074/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:662453/150‑1 (MQ=255) aaCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCGACAGGATTATCGCTGccccgg > 2:145600/1‑148 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 1:1025613/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 1:30311/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGAGCCGGCCCTTTCGCGGGTTAACCCGCGCCAACACGCTTATAGCTGccccagg > 1:455375/1‑147 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTTTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCACG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTa < 1:7234646/150‑1 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTa < 1:6904843/150‑1 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCCCTACAACACGGTTATAGCATCCCCAGTAg > 1:3901228/1‑150 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAg < 1:7388541/150‑1 (MQ=255) ccGCCAGCGTGTCCACGCTGATTCGCTTGTAAGGCCATGAAAAAACGGGCACCGTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAg < 1:678632/150‑1 (MQ=255) ccAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAg > 2:3431026/1‑150 (MQ=255) ccAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGGGAAACCGCGCCGACAGGAGTATCGCTGCCCCCGTAgggg > 1:224868/1‑148 (MQ=255) aGCGTTTCCACGCTTATTCGCTTTTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTGTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGc < 2:2733915/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 1:2592521/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 1:4950298/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 2:4348116/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCgg > 2:2640390/1‑150 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCgg < 1:6328386/150‑1 (MQ=25) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCGCTCCGACAGGATTATCGCAGCCCCAGTTGGAGCggg > 2:751846/1‑150 (MQ=39) gTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGt < 1:2121706/150‑1 (MQ=255) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAc < 2:847673/150‑1 (MQ=255) ccACGCTGAGTCGCTTGTAAGGCACTGCAACAACGGGAACCGTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAAGGTGTGTTGTCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTCCAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAc < 2:7455426/150‑1 (MQ=38) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGCTGATCGCAGCCCCGGTAGGAGCGGGTTTAcc > 2:7013164/1‑150 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc < 1:588941/150‑1 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑‑TTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATAGCTGCCCCTGTAGGAGCGGGTTTAccc > 2:7542761/1‑150 (MQ=255) gctgctGCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCcgc < 1:6477947/150‑1 (MQ=255) gATTCGCTTGTACGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGaa < 2:1991929/150‑1 (MQ=255) aTTCGCTTGTACGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGaaa < 2:1611596/150‑2 (MQ=21) ttCGCTTGTAAGGCAATGAAAAAACGGGACCCTTCGGGTTCCCT‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAaga < 2:5010016/150‑1 (MQ=255) tgcGCTTGTAAGGCATTGAAAAAACGGGAACCTTCGGGTACCCG‑TTTTTTT‑TTATTCTGACTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTTGGTGCGGGTTTACCCGCGAaga < 2:6576902/148‑1 (MQ=39) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCAGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGc > 2:5234524/1‑150 (MQ=255) tGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTGAAACCCCTACTAAAGGATTATCGCTGGCCCGGGTGGAGCGGGGTTAACCGCGAAGTgggcc > 1:7721360/1‑147 (MQ=37) tAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCa > 2:8542981/1‑150 (MQ=255) tAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCGACAGGGTTATCGCTGCCCCTGGAGGAGCGGGTTTACCCGCGCACGGGCCAGCa > 2:5526407/1‑150 (MQ=38) acggCAATGAAAAAACGGCCCCCTCCGGGTACCCG‑ATTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTGCGCGGGTAAACCCGCCCCGACAGGATTATCGCTGCCCCTGCAGGAGCGGGTTTACCCGCGAAGAGGCCAGCAc < 1:6421720/148‑1 (MQ=38) aaTGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGc > 2:680597/1‑150 (MQ=255) aaaaaaaaaCGGGAACCCGAAGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCGCGCCGACAGGGGTATAGCTGCCCCGGGAGGGGGGGGGTTTCCCCCGGAGCGGCCCGCCCCgggca > 1:1116782/4‑147 (MQ=255) aaaaaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTAAAGGCTTATCGCTGCCCCGGTAGGAGCGGGTGTACCCGCGAAGAGGCCAGCACCGGCAAcc > 1:8014381/2‑150 (MQ=39) aaaaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg > 1:2029374/1‑117 (MQ=255) aaaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCga > 1:2895297/1‑150 (MQ=255) aaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCt < 2:6941502/105‑1 (MQ=255) aaaCGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCgaga < 2:654074/150‑1 (MQ=255) aaCGGGAACCCGAAGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGaa > 2:4247738/1‑150 (MQ=255) aCGGGAACCCGAAGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGAGGGTTTAACCCCGAAGAGGCCAGCACCGGCAAccccgaac > 2:2929919/1‑144 (MQ=38) gggACCCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCGACGACAGGATTATCGCTGCCCCGGTCGGCGCGGGGTTACCCGCGAAGAGGCCCGCACCGGCCACCGCGAAccc > 2:184213/1‑150 (MQ=37) gggAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAcc > 2:2112629/1‑150 (MQ=255) acccTTCGGGTTCCCG‑ATTTTTT‑TTATTCTGACTGTGTGTGGTCAGGGCCGGCCCTTCCGCGGGAAACCCCGCCCCTACAGGCTTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa < 1:4383771/148‑1 (MQ=38) gTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCAACACGAATATCCCAGCCCCCGGACGACCCGGGTTACCCCCCAAGAGGCCCCCACCCGCAACCCAGCAACCCAACAGGgcgcc > 2:4459054/1‑149 (MQ=19) gTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCAACAGGATTATAGCAGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCAACTGTgcgcc > 2:4697553/1‑149 (MQ=38) ttttttt‑ttATTCTGATTGTGTGTTGTCAGTGCCGGCCGTTTCGGGGGTAAACCGGCTCCTACTGTTTTATCGCTGCCCGTGTTGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCt < 1:8594631/150‑1 (MQ=255) tttttt‑ttATTCTTATTGTGTGTTTTCTGGGCGGGCCCTTGCGGGGTTAACCCCGCTCCTCCAGGTTTTGCGCTGCCCCTTTAGGTGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTa < 1:1618216/150‑1 (MQ=255) tttttt‑ttATTCTGATTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTa < 2:359238/150‑1 (MQ=255) tttt‑ttttTCTGAATGTGTGTTGTCTGTGCCGGCCCTTTCGCGGTTAAACCCGCTCATACCGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACt < 1:8769180/150‑1 (MQ=39) ttt‑ttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTg > 2:7201861/1‑150 (MQ=255) gAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctgc < 2:3228077/150‑1 (MQ=255) tgtgtgTTGTCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCATCCTGTTTTATCGCTGCCCCTGTTGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCtgctgc < 1:3395158/150‑1 (MQ=38) tgtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTa < 1:5861383/150‑1 (MQ=255) gttgtCAGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCGACAGGATTATAGCTGCCCCGGGAGGAGCGGGTTTTCCCGCGAAGAGGCCAGCCCCCGCAACCGAGAAACCCGACAGTGCGCACAGCCCGACTGTTCATTCTGCGGCTACTc > 2:3131677/1‑150 (MQ=255) ctgTGCCGGCCCTTTCGGGGGTAAACCCGCTCCTACAGGTTTTTCGCTGCCCGTGTTGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGc < 1:7035238/148‑1 (MQ=38) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCt < 2:1053669/150‑1 (MQ=255) tGCCGGCCCTTTCGCGGGTTAACCCCCTCCGACAGGATTATCGCTGCCCCGGTAGGGGCGGGTTTACCCGCGAAGAGGCCAGCCCCGGCAACCCAGAAACCCGACTGTGCGCACACCCCTACTGTTCATTCTGCTGCTACTCACCGccgg > 2:6104919/1‑148 (MQ=38) cGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCaa < 2:7665707/150‑1 (MQ=255) ccTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 2:4535471/150‑1 (MQ=255) ttCGGGGTTAACCCCGCGCCACCCGGATTAGCGCTGCCCCTGTTGGCGGGGTTTCACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc < 1:85940/150‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc > 1:3577959/1‑150 (MQ=255) ggTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAcc > 1:465878/1‑150 (MQ=255) gTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAccc > 1:1779832/1‑150 (MQ=255) aCCCGCTCCTACTGGTTTAGCGCGCCCCCTTTAGGCGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 1:3054626/150‑1 (MQ=255) aCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 2:3901228/150‑1 (MQ=255) ccGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:2147707/1‑150 (MQ=37) ccGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:8475246/1‑150 (MQ=255) ccGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:3095751/1‑150 (MQ=255) cTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGcc > 2:7839023/1‑150 (MQ=255) cTCCAACGGTATTCTCGCGGCCCCTGTTGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGcc < 1:751846/150‑1 (MQ=255) tCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa > 2:8800355/1‑144 (MQ=255) tCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 1:8800355/144‑1 (MQ=255) tCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCt > 2:4889415/1‑150 (MQ=255) cTACTGGATTATCGCTGCCCCTTTTGGTGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 1:3431026/150‑1 (MQ=255) tACCGGTTTCTCGCGGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg < 1:2795570/150‑1 (MQ=39) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:4051195/1‑150 (MQ=255) aCAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggt > 2:1103029/1‑150 (MQ=255) cAGTATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg < 1:5670901/150‑1 (MQ=255) gATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc > 2:6757813/1‑150 (MQ=255) gATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc > 1:3300707/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCAGCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:5482849/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 1:5186698/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 1:4619698/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:7310790/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:253319/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 1:1689242/1‑150 (MQ=255) tATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGa < 2:1238399/150‑1 (MQ=255) | GGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGA > NC_002947/2461708‑2462003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |