| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,461,859 | C→A | 5.8% | intergenic (+118/‑63) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,461,859 | 0 | C | A | 5.8% | 638.9 / 22.5 | 215 | intergenic (+118/‑63) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (101/99); new base A (2/10); total (104/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.42e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.88e-01 | |||||||||||
Only 100 of 220 total aligned reads displayed.
CTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATG > NC_002947/2461710‑2462008 | tGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCt < 2:3813350/150‑1 (MQ=255) gtgtGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGc < 2:5171381/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 2:862074/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:842027/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:840892/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:662453/150‑1 (MQ=255) gAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCt < 1:6878155/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 1:1025613/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 1:30477/150‑1 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTTTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCAC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTa < 1:7234646/150‑1 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGCTTATCGCTGCCCCGGtg > 2:3054626/1‑149 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCGCCAACACGAATAAAGCGGCCCCGGTa > 1:1774196/1‑150 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAg < 1:7388541/150‑1 (MQ=255) ccGCCAGCGTGTCCACGCTGATTCGCTTGTAAGGCCATGAAAAAACGGGCACCGTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAg < 1:678632/150‑1 (MQ=255) ccAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAg > 2:3431026/1‑150 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGGATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑gg < 1:4762639/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑gg < 2:4348116/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑gg < 1:3024925/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑gg < 2:754047/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGC‑gg > 2:2640390/1‑150 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑GTTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGC‑gg < 1:6328012/150‑1 (MQ=25) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGC‑GGGTTTAc < 1:3230289/150‑1 (MQ=25) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTAc < 2:847673/150‑1 (MQ=255) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGGAAAACCGCACCGAAAGGATTGTAGCAGCCCCTGTATGATC‑GGGttttc > 1:350780/1‑148 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGC‑GGGTTTAcc < 2:7686959/150‑1 (MQ=21) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTAcc < 1:588941/150‑1 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑GTTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCGCCTACATGATGATAGCTGCCCCGGGTGGAGC‑GGGGTTTcc > 1:3301222/1‑150 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCACCAACAGGATTATAGCTGCCCCAGTAGGAGC‑CGGTTTAacc > 1:1238399/1‑150 (MQ=39) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAAACCCACCGACACGATTAAAGCAGCCCCGGGAGGAGC‑GGGGGTAccc > 2:2915123/1‑150 (MQ=255) gctgctGCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCcgc < 1:6477947/150‑1 (MQ=255) cTGTTTCGCTTGTCTGGCACTGAAAAAACGGGAACCTTCGGTTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGGGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGC‑GGGTTTACCcgcg < 2:7379277/150‑1 (MQ=21) gATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TATTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCCCAACTACACGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCCaa > 2:1876480/1‑150 (MQ=255) aTTCGCTTGTAAGGAAATGAAAAAACGGTAACCTTCGGTTTCCC‑T‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGC‑GGGTTTACCCGCGaaa < 2:1611594/150‑2 (MQ=18) ttCGCTTGTAAGGCAATGAAAAAACGGGACCCTTCGGGTTCCC‑T‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGC‑GGGTTTACCCGCGAaga < 2:5010016/150‑1 (MQ=255) tgcGCTTGTAAGGCATTGAAAAAACGGGAACCTTCGGGTACCC‑G‑TTTTTTTTTATTCTGACTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTTGGTGC‑GGGTTTACCCGCGAaga < 2:6576902/148‑1 (MQ=39) cGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCAACAAAAGGATTAAAGCTGCCCCAGGAGGAGC‑GGGGTTTCCCCCGCAGAgg > 1:2394276/1‑150 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCAGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGc > 2:5234524/1‑150 (MQ=255) tAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCa > 2:8542981/1‑150 (MQ=255) acggCAATGAAAAAACGGCCCCCTCCGGGTACCC‑G‑ATTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTGCGCGGGTAAACCCGCCCCGACAGGATTATCGCTGCCCCTGCAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCAc < 1:6421720/148‑1 (MQ=38) aGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCGACAGGCTTATCGCTGCCCCGGTAGGAGC‑GGGTTTTCCCGCGCAGAGGCCAGCAcc > 1:2036955/1‑150 (MQ=39) gCAATTAAAAAACGGGAACCTTCGGGTTCCCTT‑TTTTTTTTTATTCTTATTGTTTGTTGTCTGTGCCGGCCCTTTCGCGGTTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCg < 2:332793/150‑1 (MQ=37) gCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCCGCACCgg > 1:2833862/1‑150 (MQ=255) aaaaaaaaaCGGGAACCCGAAGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCGCGCCGACAGGGGTATAGCTGCCCCGGGAGGGGG‑GGGGTTTCCCCCGGAGCGGCCCGCCCCgggca > 1:1116782/4‑147 (MQ=255) aTGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCACCTAAAGGATTATCGCGGCCCCAGTAGGAGC‑GGGTTTAACCGCGCAGAGGCCAGCACCCGcca > 2:3174650/1‑148 (MQ=255) aaaaaaaCGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTAAAGGCTTATCGCTGCCCCGGTAGGAGC‑GGGTGTACCCGCGAAGAGGCCAGCACCGGCAAcc > 1:8014381/2‑150 (MQ=39) aaaCGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCgaga < 2:654074/150‑1 (MQ=255) aaaCGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGGAAAACCCCGCCTACAGGATTATAGCTGCCCCAGTAGGTGG‑GGGTTTACCCCGGCCGAGGGCACCACCCGCAAccccga > 1:4467219/1‑146 (MQ=255) aCGGCAACCTACGGGTACCC‑T‑TATTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCCCCTACAGGATTAACGCTCCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGaaa < 1:8776027/150‑1 (MQ=38) gggAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAcc > 2:2112695/1‑150 (MQ=255) gggAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAcc > 2:7115340/1‑150 (MQ=255) ccgaaggTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGTTGCCCCGGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCCGCACCCGCACCCGAGCAACCCGAcgg > 2:7653870/6‑148 (MQ=37) ggggTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTgc < 2:4726546/149‑1 (MQ=255) gTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCAACACGAATATCCCAGCCCCCGGACGACC‑CGGGTTACCCCCCAAGAGGCCCCCACCCGCAACCCAGCAACCCAACAGGgcgcc > 2:4459054/1‑149 (MQ=19) ttCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCGCCGACAGGATTATAGCAGCCCCGGGAGGAGCGGGGTTTACCC‑CGGAGAGGCCCCCACCGGCCACCGCGCCACCCGACGGTGCGcac > 1:3408682/1‑150 (MQ=255) ttttttttttttTGTTTGTGTGTTGTCTGGGCCGGCCGTTGGGCGGTTAAACCCGCCCATACCGTTTTATCGCTGCCCCTTTTGGTGG‑GGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTa < 1:2243263/150‑1 (MQ=255) ttttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACt < 2:1614218/150‑1 (MQ=255) ttttttATACTGAAGGTGGGTTGTCAGTGCCGGCCATTACGCGGGTAAACCCGCTCCAACCGTTTTATCGCTGCCCCGGTAGGCGC‑GGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACt < 1:4338145/150‑1 (MQ=37) tttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCAACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTAACCCCGAAGAGGCCAGCACCGGCAACCCAGAAAACCTACTGTGCGCACCCCCCGACTg > 2:6968900/1‑150 (MQ=38) gtgtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTTTAGCTGCCCCTGGAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGGAACCCGACTGTGCGGCCAGCCCTACTGGTCCTTCTgctgct > 2:7479641/1‑150 (MQ=37) tgtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTa < 1:5861383/150‑1 (MQ=255) tttttCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACTGTTTTATCGCGGCCCCTGTTGTAGC‑GGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTc < 1:1681083/146‑1 (MQ=38) ttgtCTGTGCGGGCCCTTTCGGGGTTAACCCCGCACCTACTGTTTTTGCGGTGCCCCTTTTGGCGG‑GGTTTAACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCa < 1:213915/150‑1 (MQ=255) ttgtCAGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTAATGTTCATTCTGCTGCTACTCa > 2:2582498/1‑150 (MQ=255) ctgTGCCGGCCCTTTCGGGGGTAAACCCGCTCCTACAGGTTTTTCGCTGCCCGTGTTGGTGG‑GGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGc < 1:7035238/148‑1 (MQ=38) aGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCTACAGGATTATCGCTGCCCCGGTAGGAGC‑GGGTTTACCCGCGAATCGGCCAGCACCCGCAACCCCGAAACCCGACGGTGCGCACAGCCCGACGGTTCATTCTGCTGCGACACACCGcc > 2:3674470/1‑150 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCt < 2:1053669/150‑1 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCGGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGTGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCGGCTACTCACCGccg > 2:1241710/1‑149 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCAACAGGATTATCGCATCCCCAGTAGGAGC‑GGGTTTACCCGCCGAGAGGCCAGCACCGGCAACCCAGAAAACCAACGGTGAGCCAAGCCCTACTGTTCAATCTGCAGCGACACACCGcca > 2:4018655/1‑149 (MQ=21) ccTTTCGCGGTTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGTAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 2:2452953/150‑1 (MQ=255) ccTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 2:4535471/150‑1 (MQ=255) ttCGGGGTTAACCCCGCGCCACCCGGATTAGCGCTGCCCCTGTTGGCGG‑GGTTTCACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc < 1:85940/150‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAGGATTATAGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc > 1:3578034/1‑150 (MQ=255) cgGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCa > 2:1036872/1‑150 (MQ=255) cgGGCAACCCCGCTCCTCCTCGATTATCGCCGCCCCTGTAGGAGC‑GGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCa < 1:1958739/150‑1 (MQ=39) ggTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAcc > 1:465878/1‑150 (MQ=255) aCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 2:3901228/150‑1 (MQ=255) ccGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:306924/1‑150 (MQ=255) ccGCTCCCACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 2:6024555/1‑150 (MQ=255) gCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgcgc > 1:8617858/1‑150 (MQ=255) cTCCAACGGTATTCTCGCGGCCCCTGTTGGTGG‑GGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGcc < 1:751846/150‑1 (MQ=255) tCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa > 2:8800355/1‑144 (MQ=255) tACCGGATTATCGCGGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTCCTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg < 1:2795552/150‑1 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:4133490/1‑150 (MQ=255) aCAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggt > 2:1103029/1‑150 (MQ=255) cAGTATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg < 1:5670901/150‑1 (MQ=255) aGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTATCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtgg < 2:7234767/150‑1 (MQ=255) aGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtgg < 1:8537992/150‑1 (MQ=255) gattcgcgcgGCCCCGGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTCCGGTGCGCACAGCCCTACGGTTCAGTCTGCTGCGACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc < 2:4691654/144‑1 (MQ=38) gATTATCGCTGCCCCTGTTGGAGC‑GGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCACCACCCAGGCGCTCCAGggtgggg < 1:7677746/150‑3 (MQ=255) gATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc > 2:6877774/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCAGCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:5482849/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 1:5186698/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:6735661/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 1:4619698/1‑150 (MQ=255) aTCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAc < 2:2036955/150‑1 (MQ=255) tCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGACACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 2:611728/1‑150 (MQ=255) tCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 2:5365168/1‑150 (MQ=255) tCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 2:8691955/1‑150 (MQ=255) cTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATg > 2:6804989/1‑150 (MQ=255) cTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATg < 2:1774196/150‑1 (MQ=255) | CTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGC‑GGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATG > NC_002947/2461710‑2462008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |