| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,461,862 | C→A | 5.4% | intergenic (+121/‑60) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,461,862 | 0 | C | A | 5.4% | 678.9 / 18.6 | 211 | intergenic (+121/‑60) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (99/99); new base A (2/10); total (102/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.49e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.33e-01 | |||||||||||
Only 100 of 221 total aligned reads displayed.
GTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGG > NC_002947/2461713‑2462010 | gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 2:862074/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:662453/150‑1 (MQ=255) gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:840892/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑GATTTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCt < 2:8385975/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 1:1025613/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 1:30311/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGAGCCGGCCCTTTCGCGGGTTAACCCGCGCCAACACGCTTATAGCTGccccagg > 1:455375/1‑147 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTTTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCAC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTa < 1:7234646/150‑1 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTa < 1:6904843/150‑1 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCGCCAACACGAATAAAGCGGCCCCGGTa > 1:1774196/1‑150 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAg < 1:4649885/150‑1 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAg < 1:7388541/150‑1 (MQ=255) ccAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAg > 2:3431026/1‑150 (MQ=255) aGCGTTTCCACGCTTATTCGCTTTTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTTGTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGc < 2:2733915/150‑1 (MQ=255) aGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCg > 2:1185346/1‑150 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGGATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 1:4762639/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 2:754047/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCgg > 2:2640390/1‑150 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑GT‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCgg < 1:6328386/150‑1 (MQ=25) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCggg < 2:499934/150‑1 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTAcc < 2:7686959/150‑1 (MQ=21) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAccc < 1:5732737/150‑1 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCACCAACAGGATTATAGCTGCCCCAGTAGGAGCCGGTTTAacc > 1:1238399/1‑150 (MQ=39) gctgctGCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCcgc < 1:6477947/150‑1 (MQ=255) gATTCGCTTGTACGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGaa < 2:1991929/150‑1 (MQ=255) aTTCGCTTGTAAGGAAATGAAAAAACGGTAACCTTCGGTTTCCC‑T‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGaaa < 2:1611594/150‑2 (MQ=18) tgcGCTTGTAAGGCATTGAAAAAACGGGAACCTTCGGGTACCC‑G‑‑TTTTTTT‑TTATTCTGACTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTTGGTGCGGGTTTACCCGCGAaga < 2:6576902/148‑1 (MQ=39) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCAGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGc > 2:5234524/1‑150 (MQ=255) tGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑GT‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTGAAACCCCTACTAAAGGATTATCGCTGGCCCGGGTGGAGCGGGGTTAACCGCGAAGTgggcc > 1:7721360/1‑147 (MQ=37) tAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCa > 2:8542981/1‑150 (MQ=255) tAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCGACAGGGTTATCGCTGCCCCTGGAGGAGCGGGTTTACCCGCGCACGGGCCAGCa > 2:5526407/1‑150 (MQ=38) acggCAATGAAAAAACGGCCCCCTCCGGGTACCC‑G‑‑ATTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTGCGCGGGTAAACCCGCCCCGACAGGATTATCGCTGCCCCTGCAGGAGCGGGTTTACCCGCGAAGAGGCCAGCAc < 1:6421720/148‑1 (MQ=38) aGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCGACAGGCTTATCGCTGCCCCGGTAGGAGCGGGTTTTCCCGCGCAGAGGCCAGCAcc > 1:2036955/1‑150 (MQ=39) gCAATTAAAAAACGGGAACCTTCGGGTTCCCTT‑‑TTTTTTT‑TTATTCTTATTGTTTGTTGTCTGTGCCGGCCCTTTCGCGGTTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCg < 2:332793/150‑1 (MQ=37) aaTGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCGCCTACAGGATTATCGCTGCCCCCGTAGGGGCGGGTTTACCCGCGCAGAGGCCCGCACCGGCa > 2:440981/1‑150 (MQ=39) aaaaaaaaaCGGGAACCCGAAGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCGCGCCGACAGGGGTATAGCTGCCCCGGGAGGGGGGGGGTTTCCCCCGGAGCGGCCCGCCCCgggca > 1:1116782/4‑147 (MQ=255) aTGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCACCTAAAGGATTATCGCGGCCCCAGTAGGAGCGGGTTTAACCGCGCAGAGGCCAGCACCCGcca > 2:3174650/1‑148 (MQ=255) aaaaaaaaCGGGAACCCGAAGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCGCCTACAGGATTATCGCTTCCCCGGTAGGAGCGGGGTTAACCCCGAAGAGGCCAGCACCCGCAAc > 1:6834829/3‑150 (MQ=255) aaaaaaaCGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTAAAGGCTTATCGCTGCCCCGGTAGGAGCGGGTGTACCCGCGAAGAGGCCAGCACCGGCAAcc > 1:8014381/2‑150 (MQ=39) aaaaaCGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCga > 1:2895297/1‑150 (MQ=255) aaaCGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCgaga < 2:654074/150‑1 (MQ=255) aCGGGAACCCGAAGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGAGGGTTTAACCCCGAAGAGGCCAGCACCGGCAAccccgaac > 2:2929919/1‑144 (MQ=38) aCGGCAACCTACGGGTACCC‑T‑‑TATTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCCCCTACAGGATTAACGCTCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGaaa < 1:8776027/150‑1 (MQ=38) gggACCCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCGACGACAGGATTATCGCTGCCCCGGTCGGCGCGGGGTTACCCGCGAAGAGGCCCGCACCGGCCACCGCGAAccc > 2:184213/1‑150 (MQ=37) gggAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAcc > 2:2112695/1‑150 (MQ=255) gggAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAcc > 2:7115340/1‑150 (MQ=255) aaCCTTCGGGTTCCT‑T‑‑TTTTTTT‑TTTTTTTGATTGTGTGTTGTCTGGGCGGGCCCTTTGGGGGTTAAACCCGCTCCTACAGGTTTTTGGCGGCCCCTGTAGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa < 1:2606872/150‑1 (MQ=255) ccgaaggTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGTTGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCACCCGCACCCGAGCAACCCGAcgg > 2:7653870/6‑148 (MQ=37) cTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCACCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCCCCAAGAGGCCAGCAACCGCAACCGAGAAAACCAAcgg > 2:511240/1‑148 (MQ=255) ggggTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTgc < 2:4726546/149‑1 (MQ=255) gTTCCC‑T‑‑TTTTTTT‑TAATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTCCAGGATTATCGCGGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGca < 2:3766217/150‑1 (MQ=255) tttttt‑ttttttTGTTTGTGTGTTGTCTGGGCCGGCCGTTGGGCGGTTAAACCCGCCCATACCGTTTTATCGCTGCCCCTTTTGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTa < 1:2243263/150‑1 (MQ=255) tttttt‑ttATTCTGATTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTa < 2:359238/150‑1 (MQ=255) tttt‑ttATACTGAAGGTGGGTTGTCAGTGCCGGCCATTACGCGGGTAAACCCGCTCCAACCGTTTTATCGCTGCCCCGGTAGGCGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACt < 1:4338145/150‑1 (MQ=37) ttt‑ttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCAACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAACCCCGAAGAGGCCAGCACCGGCAACCCAGAAAACCTACTGTGCGCACCCCCCGACTg > 2:6968900/1‑150 (MQ=38) ttGATTGTGTGTTTTCTGTGCCGGCCGTTTCGCGGTTAAACCCGCTCCTACCGGTTTCTCGCTGCCCGTGTTGGTGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTct < 1:5563014/149‑1 (MQ=37) tgtgtgTTGTCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCATCCTGTTTTATCGCTGCCCCTGTTGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCtgctgc < 1:3395158/150‑1 (MQ=38) gtgtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTTTAGCTGCCCCTGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGGAACCCGACTGTGCGGCCAGCCCTACTGGTCCTTCTgctgct > 2:7479641/1‑150 (MQ=37) tgtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTa < 1:5861383/150‑1 (MQ=255) tttttCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACTGTTTTATCGCGGCCCCTGTTGTAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTc < 1:1681083/146‑1 (MQ=38) ttgtCTGTGCGGGCCCTTTCGGGGTTAACCCCGCACCTACTGTTTTTGCGGTGCCCCTTTTGGCGGGGTTTAACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCa < 1:213915/150‑1 (MQ=255) ttgtCAGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTAATGTTCATTCTGCTGCTACTCa > 2:2582498/1‑150 (MQ=255) ctgTGCCGGCCCTTTCGGGGGTAAACCCGCTCCTACAGGTTTTTCGCTGCCCGTGTTGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGc < 1:7035238/148‑1 (MQ=38) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGTTTTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCt < 2:1053422/150‑1 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCGGCCCCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCGGCTACTCACCGccg > 2:1241710/1‑149 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCAACAGGATTATCGCATCCCCAGTAGGAGCGGGTTTACCCGCCGAGAGGCCAGCACCGGCAACCCAGAAAACCAACGGTGAGCCAAGCCCTACTGTTCAATCTGCAGCGACACACCGcca > 2:4018655/1‑149 (MQ=21) ccTTTCGCGGGTAAACCCGCTCCTACAGTATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 2:6804515/150‑1 (MQ=255) ccTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 2:4535471/150‑1 (MQ=255) tttCGCGGGTAAACCCCCTCCAACACGAATATCGCATCCCCAGTAGGAGCCGGTTTACCCGCGAAGAGGCCAGCACCGGCAAACGAGAAACCCAACAGTGCGCACAGCCCGACTGTTCATTCTGCTGCTACTCACCCCCTGCAACCaacg > 2:107274/1‑148 (MQ=37) ttCGCGGTTAAACCCGCTCCTACAGTTTTAGCGCTGCCCGTGTTGGAGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc < 1:6056512/150‑1 (MQ=39) ttCGCGGGTAACCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc < 2:1614951/150‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc > 1:3577959/1‑150 (MQ=255) cgGGCAACCCCGCTCCTCCTCGATTATCGCCGCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCa < 1:1958739/150‑1 (MQ=39) aCCCGCTCCTACTGGTTTAGCGCGCCCCCTTTAGGCGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 1:3054626/150‑1 (MQ=255) aCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 2:4328637/150‑1 (MQ=255) cggCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:3095831/3‑150 (MQ=255) ccGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:8475246/1‑150 (MQ=255) gCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgcgc > 1:8617858/1‑150 (MQ=255) cTCCTACCGGATTATCGCGGCCCCTGTCGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGcc < 1:859436/150‑1 (MQ=255) tCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa > 2:8800355/1‑144 (MQ=255) cTACTGGATTATCGCTGCCCCTTTTGGTGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 1:3431026/150‑1 (MQ=255) taccgttttATCGTTGCCCGTGTCGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg < 1:7653870/143‑1 (MQ=39) tACCGGTTTCTCGCGGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg < 1:2795570/150‑1 (MQ=39) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 1:5141439/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:4133490/1‑150 (MQ=255) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:3961548/1‑150 (MQ=255) aGGATTATCGCTGCCCCTGTAGGAGCGGGTTTATCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtgg < 2:7234767/150‑1 (MQ=255) gattcgcgcgGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTCCGGTGCGCACAGCCCTACGGTTCAGTCTGCTGCGACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc < 2:4691654/144‑1 (MQ=38) gatacgcgcgGCCCCTGTTGGAGGGGGTTAACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCAGTCTGCTGCTACTCCCCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc < 1:856752/144‑1 (MQ=255) gATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc > 1:3300707/1‑150 (MQ=255) gATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc > 2:6877774/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCAGCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:5482849/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:6735661/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:7310790/1‑150 (MQ=255) aTCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAc < 2:2036955/150‑1 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGACACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 2:611728/1‑150 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 2:5365168/1‑150 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 2:8691955/1‑150 (MQ=255) tGCCCCTTTATGCGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATgg < 1:440981/150‑1 (MQ=255) tGCCCCTGTCGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATgg < 1:2309729/150‑1 (MQ=255) | GTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGG > NC_002947/2461713‑2462010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |