| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,461,866 | T→G | 12.1% | intergenic (+125/‑56) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,461,866 | 0 | T | G | 12.1% | 503.5 / 3.3 | 214 | intergenic (+125/‑56) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (67/104); new base G (26/5); total (105/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.64e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 220 total aligned reads displayed.
GAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCA > NC_002947/2461717‑2462015 | gAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCt < 1:6878155/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑T‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 1:6762978/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑GATTTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCt < 2:8385975/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 1:1025613/150‑1 (MQ=255) aCCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGt < 1:30311/150‑1 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGCTTATCGCTGCCCCGGtg > 2:3054626/1‑149 (MQ=255) cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCGCCAACACGAATAAAGCGGCCCCGGTa > 1:1774196/1‑150 (MQ=255) ccAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAg > 2:3431026/1‑150 (MQ=255) aGCGTTTCCACGCTTATTCGCTTTTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTTGTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGc < 2:2733915/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGGATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 1:4762639/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCgg < 2:754047/150‑1 (MQ=255) gCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCgg > 2:2640390/1‑150 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑GT‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCgg < 1:6328012/150‑1 (MQ=25) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGCTGATCGCAGCCCCGGTAGGAGCGGGTTTAcc > 2:7013164/1‑150 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc < 1:588941/150‑1 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAccc < 1:5732737/150‑1 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCACCAACAGGATTATAGCTGCCCCAGTAGGAGCCGGTTTAacc > 1:1238399/1‑150 (MQ=39) gctgctGCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCcgc < 1:6477947/150‑1 (MQ=255) gCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCCCGCCTACAGGATTATCGCTGCCCCGGGAGGCGCGGGTTTAacccc > 2:85940/1‑148 (MQ=255) cTGTTTCGCTTGTCTGGCACTGAAAAAACGGGAACCTTCGGTTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGGGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCcgcg < 2:7379277/150‑1 (MQ=21) gATTCGCTTGTACGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGaa < 2:1991929/150‑1 (MQ=255) aTTCGCTTGTACGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGaaa < 2:1611596/150‑2 (MQ=21) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCAGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGc > 2:5234524/1‑150 (MQ=255) tAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCGACAGGGTTATCGCTGCCCCTGGAGGAGCGGGTTTACCCGCGCACGGGCCAGCa > 2:5526407/1‑150 (MQ=38) acggCAATGAAAAAACGGGACCCTGCGGGTGCCC‑G‑‑TTTTTTT‑TTCTTCTGAATGTGTGTGGTCAGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTACCGGGGCAGCGATAATCCTGTCGGAGCGGGTTTACCCGCGAAAGGGCCGGCAc < 2:8480893/148‑1 (MQ=9) acggCAATGAAAAAACGGCCCCCTCCGGGTACCC‑G‑‑ATTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTGCGCGGGTAAACCCGCCCCGACAGGATTATCGCTGCCCCTGCAGGAGCGGGTTTACCCGCGAAGAGGCCAGCAc < 1:6421720/148‑1 (MQ=38) aGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCGACAGGCTTATCGCTGCCCCGGTAGGAGCGGGTTTTCCCGCGCAGAGGCCAGCAcc > 1:2036955/1‑150 (MQ=39) gCAATTAAAAAACGGGAACCTTCGGGTTCCCTT‑‑TTTTTTT‑TTATTCTTATTGTTTGTTGTCTGTGCCGGCCCTTTCGCGGTTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCg < 2:332793/150‑1 (MQ=37) aaTGAAAAAACGGGAACCTTCGGGTTCCC‑GT‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGc > 2:680597/1‑150 (MQ=255) aaTGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCGCCTACAGGATTATCGCTGCCCCCGTAGGGGCGGGTTTACCCGCGCAGAGGCCCGCACCGGCa > 2:440981/1‑150 (MQ=39) aaaaaaaaaCGGGAACCCGAAGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAACCGCGCCGACAGGGGTATAGCTGCCCCGGGAGGGGGGGGGTTTCCCCCGGAGCGGCCCGCCCCgggca > 1:1116782/4‑147 (MQ=255) aTGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCACCTAAAGGATTATCGCGGCCCCAGTAGGAGCGGGTTTAACCGCGCAGAGGCCAGCACCCGcca > 2:3174650/1‑148 (MQ=255) aaaaaCGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCga > 1:2895297/1‑150 (MQ=255) aaaaCGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCt > 1:6941502/1‑105 (MQ=255) aaaaCGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCt < 2:6941502/105‑1 (MQ=255) aaCGGGAACCCGAAGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGaa > 2:4247738/1‑150 (MQ=255) aCGGCAACCTACGGGTACCC‑T‑‑TATTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCCCCTACAGGATTAACGCTCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGaaa < 1:8776027/150‑1 (MQ=38) gggACCCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCGACGACAGGATTATCGCTGCCCCGGTCGGCGCGGGGTTACCCGCGAAGAGGCCCGCACCGGCCACCGCGAAccc > 2:184213/1‑150 (MQ=37) gggAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAcc > 2:2112629/1‑150 (MQ=255) ggAACCTGCGGTGTCCC‑T‑‑TTTTTTT‑TTATTCTGAATGTGTTTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTCCAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAccc < 2:6605270/150‑1 (MQ=38) aaCCTTCGGGTTCCT‑T‑‑TTTTTTT‑TTTTTTTGATTGTGTGTTGTCTGGGCGGGCCCTTTGGGGGTTAAACCCGCTCCTACAGGTTTTTGGCGGCCCCTGTAGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa < 1:2606872/150‑1 (MQ=255) cTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCACCTACAGGATTATCGCTGCCCCGGTAGGAGCGGGTTTACCCCCCAAGAGGCCAGCAACCGCAACCGAGAAAACCAAcgg > 2:511240/1‑148 (MQ=255) gTTCCC‑T‑‑TTTTTTT‑TAATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTCCAGGATTATCGCGGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGca < 2:3766217/150‑1 (MQ=255) gTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCAACAGGATTATAGCAGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCAACTGTgcgcc > 2:4697553/1‑149 (MQ=38) tttttt‑ttttttTGTTTGTGTGTTGTCTGGGCCGGCCGTTGGGCGGTTAAACCCGCCCATACCGTTTTATCGCTGCCCCTTTTGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTa < 1:2243263/150‑1 (MQ=255) tttt‑ttATACTGAAGGTGGGTTGTCAGTGCCGGCCATTACGCGGGTAAACCCGCTCCAACCGTTTTATCGCTGCCCCGGTAGGCGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACt < 1:4338145/150‑1 (MQ=37) ttt‑ttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTg > 2:7201861/1‑150 (MQ=255) tGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGCTTATCGCAGCCCCTGTAGGAGCGGGGTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctg > 1:7222974/1‑150 (MQ=255) tgtgtgTTGTCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCATCCTGTTTTATCGCTGCCCCTGTTGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCtgctgc < 1:3395158/150‑1 (MQ=38) gtgtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTACAGGATTTTAGCTGCCCCTGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGGAACCCGACTGTGCGGCCAGCCCTACTGGTCCTTCTgctgct > 2:7479641/1‑150 (MQ=37) tgtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTa < 1:5861383/150‑1 (MQ=255) tttttCAGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACTGTTTTATCGCGGCCCCTGTTGTAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTc < 1:1681083/146‑1 (MQ=38) ttgtCTGTGCGGGCCCTTTCGGGGTTAACCCCGCACCTACTGTTTTTGCGGTGCCCCTTTTGGCGGGGTTTAACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCa < 1:213915/150‑1 (MQ=255) ttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCa < 2:4472035/150‑1 (MQ=255) ttgtCAGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTAATGTTCATTCTGCTGCTACTCa > 2:2582498/1‑150 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCt < 2:1053669/150‑1 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCGGCCCCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCGGCTACTCACCGccg > 2:1241710/1‑149 (MQ=255) tGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTg < 1:7330722/150‑1 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCaa < 2:7665707/150‑1 (MQ=255) ccTTTCGCGGTTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGTAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 2:2452953/150‑1 (MQ=255) ccTTTCGCGGGTAAACCCGCTCCTACAGTATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 2:6804515/150‑1 (MQ=255) ttCGGGGTTAACCCCGCGCCACCCGGATTAGCGCTGCCCCTGTTGGCGGGGTTTCACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc < 1:85940/150‑1 (MQ=255) ttCGCGGGTAACCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc < 2:1614951/150‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGc > 1:3577959/1‑150 (MQ=255) cgGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCa > 2:1036872/1‑150 (MQ=255) cgGGCAACCCCGCTCCTCCTCGATTATCGCCGCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCa < 1:1958739/150‑1 (MQ=39) ggTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAcc > 1:465878/1‑150 (MQ=255) aaaCCCGCTCCAACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTg > 1:7461215/1‑150 (MQ=255) aCCCGCTCCTACTGGTTTAGCGCGCCCCCTTTAGGCGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 1:3054626/150‑1 (MQ=255) aCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 2:3901228/150‑1 (MQ=255) aCCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 1:7857525/150‑1 (MQ=255) cccGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAg > 1:8025103/1‑150 (MQ=255) cggCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 1:3095831/3‑150 (MQ=255) ccGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgc > 2:3486754/1‑150 (MQ=37) gCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAgcgc > 1:8617858/1‑150 (MQ=255) tCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa > 2:8800355/1‑144 (MQ=255) tCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCt > 2:4889415/1‑150 (MQ=255) cTACTGGATTATCGCTGCCCCTTTTGGTGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 1:3431026/150‑1 (MQ=255) tACCGGTTTCTCGCGGCCCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg < 1:2795570/150‑1 (MQ=39) tACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:4051195/1‑150 (MQ=255) aCAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggt > 2:1103029/1‑150 (MQ=255) cAGTATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg < 1:5670901/150‑1 (MQ=255) aGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtgg < 1:8537992/150‑1 (MQ=255) gATTATCGCTGCCCCTGTTGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCACCACCCAGGCGCTCCAGggtgggg < 1:7677746/150‑3 (MQ=255) gATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc > 1:3300707/1‑150 (MQ=255) aTTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTcc < 2:455375/150‑1 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCAGCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:5482849/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 1:4619698/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 2:6557238/1‑150 (MQ=255) ttATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCg > 1:5186698/1‑150 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGACACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 2:611728/1‑150 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 2:8691955/1‑150 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 2:5365168/1‑150 (MQ=255) tGCCCCTTTATGCGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATgg < 1:440981/150‑1 (MQ=255) tGCCCCTGTCGGTGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATgg < 1:2309729/150‑1 (MQ=255) gCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATggg < 2:3987462/150‑1 (MQ=255) cccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGgca < 2:6530929/150‑1 (MQ=255) ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc > 1:6581559/1‑137 (MQ=255) ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc < 2:6581559/137‑1 (MQ=255) tGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGgcagca > 2:7586116/1‑150 (MQ=255) | GAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCC‑G‑‑TTTTTTT‑TTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCA > NC_002947/2461717‑2462015 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |