Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,345,0680AT25.7% 272.4 / 58.3 177intergenic (+60/‑271)ribAB‑II/PP_38143,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
Reads supporting (aligned to +/- strand):  ref base A (58/55);  new base T (7/32);  total (77/100)
Fisher's exact test for biased strand distribution p-value = 3.00e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 185 total aligned reads displayed.

TGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTG  >  NC_002947/4344920‑4345216
                                                                                                                                                     |                                                                                                                                                      
tGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGGTTTACAC‑CGAAAGCGa                                                                                                                                                        >  1:7686241/1‑149 (MQ=255)
tGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGa                                                                                                                                                        <  2:1907112/149‑1 (MQ=255)
 ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAg                                                                                                                                                       <  1:2801846/149‑1 (MQ=255)
 ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAg                                                                                                                                                       <  1:6838343/149‑1 (MQ=255)
 ggggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAg                                                                                                                                                       <  2:6500924/149‑1 (MQ=255)
   ggCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAggg                                                                                                                                                     <  1:6347324/149‑1 (MQ=255)
     ccgccgCTGACATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTg                                                                                                                                                   <  2:7759251/149‑1 (MQ=255)
       gccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGGAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGac                                                                                                                                                 <  2:3182024/149‑1 (MQ=255)
        ccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGaca                                                                                                                                                <  1:2903816/149‑1 (MQ=255)
          gcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGAcacc                                                                                                                                              <  1:6488342/149‑1 (MQ=255)
           cTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGAcacca                                                                                                                                             <  2:6094491/149‑1 (MQ=255)
              aaaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTTCCCGCGAAAGGGAGGGGGACACCACCg                                                                                                                                          >  1:7341151/1‑149 (MQ=255)
               aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGa                                                                                                                                         <  1:8168020/149‑1 (MQ=255)
                     cgGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGGGGGGGGCACCACcgccgccgg                                                                                                                                   >  2:6328721/1‑146 (MQ=255)
                      ggggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTc                                                                                                                                 <  1:4958245/149‑1 (MQ=255)
                       gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTcg                                                                                                                                <  1:6720278/149‑1 (MQ=255)
                        ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCAGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGC‑ATTcgc                                                                                                                               <  1:5969994/149‑1 (MQ=25)
                         gcgggCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTcgcg                                                                                                                              <  1:573994/146‑1 (MQ=255)
                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGC‑ATTcgcg                                                                                                                              <  2:2696819/149‑1 (MQ=25)
                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGC‑ATTcgcg                                                                                                                              <  1:2346138/149‑1 (MQ=25)
                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTcgcg                                                                                                                              <  2:2497288/149‑1 (MQ=255)
                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTcgcg                                                                                                                              <  1:8048014/149‑1 (MQ=255)
                         gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTcgcg                                                                                                                              <  2:4851420/149‑1 (MQ=255)
                         gCTGGCGGGCTATGAGCTGGAGGCGGTGCAGATCCTCCCGTACGACCCGGGGATGGAAGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTcgcg                                                                                                                              <  2:8815338/149‑1 (MQ=39)
                          cTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCgg                                                                                                                             <  1:1638134/149‑1 (MQ=255)
                            ggCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGGTTAACCGCGCATGCGCGGGGGGCACCCCCCCCCC‑ATTCGCgggg                                                                                                                           >  2:5527629/1‑148 (MQ=255)
                             gCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTGCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCGGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTa                                                                                                                          <  2:1177541/149‑1 (MQ=255)
                              cGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTTACCCCCAAAGCGCGGGGGAAACCACCCACCC‑AATCGCGGGGaa                                                                                                                         >  1:7908487/1‑149 (MQ=255)
                               gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTaaa                                                                                                                        <  2:2447485/149‑1 (MQ=255)
                               gggCTATGAGCTGGAGGTGGTGCAGAGCAGCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTaaa                                                                                                                        <  1:572976/149‑1 (MQ=255)
                                ggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGGTTTCCCGCGAATGCGGGGGGGGCACCAACCACGC‑CGTCGCCGGTaaaa                                                                                                                       >  2:7411723/1‑148 (MQ=255)
                                           ggAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTTCCCGCCCATGCGGGGGTGACACCACCCCACC‑CTTAGCGGGGAAA‑CCCGCGccaaaa                                                                                                           >  2:437198/1‑145 (MQ=255)
                                                   tgCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGGTTTCCCCCGAATGCGCGGGTGCGACCCCCCACGCAATACCCGGGGAAA‑CCC‑CTCCAACAGGGgccgg                                                                                                   >  2:6139233/1‑147 (MQ=255)
                                                    gCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGGGTCACCACCGACGC‑ATTAGCGGGTGAA‑CCCGCTCCGACAGGGCCCGTg                                                                                                  >  2:2788976/1‑149 (MQ=38)
                                                    gCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTAACCGCCAATGCGGCGGTGACACCACCCACGC‑ATTCGCGGGGTAA‑CCCCCACCTAAAGGGCCCtgg                                                                                                  >  2:2788985/1‑147 (MQ=37)
                                                    gCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGGTTACCCGCGAAATCGGGGGGGGCACCACCCCCCC‑AATCCCCGGGCAA‑ACCGCGCCCACCGGGccccgg                                                                                                  >  2:3287097/1‑146 (MQ=255)
                                                           aTCCGGTCCGCCCGGGGTTTGGAGGGCTGAGACCCCACACCCATGTGTTTGCGGGGGGCCCTGTCGGCGC‑GGGTTACCCGGCGACTGGGGGGGTGACACCACCGACGA‑TGTCGGGGTTAAC‑CCCGCTCCTACAGGGCCCTTGGTGCttt                                                                                           <  2:4614614/149‑1 (MQ=255)
                                                                gTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGGTTAACCGCGAATGCGAGGGTGACCCCACCGACGC‑AATCGCGGGTAAA‑ACCCCTCCAACAGGGCCCGTGGTGCttttttca                                                                                      >  2:4312244/1‑145 (MQ=255)
                                                                  tCGCCCCGGGGAGGGTGGGGTGAGACCCCCCACGCATTGGATGTCGCGGGGCCCTGGCGGCGG‑GGGTTCACCCGCGAAGGCGCGGGTTACCCCACCGAGGA‑ATCCGCGGGTAAC‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAgg                                                                                    <  2:6978695/149‑1 (MQ=255)
                                                                  tCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCCCCGATGCGGCGGTGACACCACCCGCCC‑AATAGCCGGTAAA‑CCCCCGCCGAAAGGGCCCCTGGTGCGTTTGTCAgg                                                                                    >  2:7535532/1‑149 (MQ=255)
                                                                  ccGACCCGGGGTGGGTGGGCTGACAACACACAATCATTTTATTCCGGGGGGCCGGGTAGGAGG‑GGGTTTACCGGCGAATGCGCGGGTGACACCACCGACGC‑ATTCGGGGTTAAC‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAgg                                                                                    <  2:594350/148‑1 (MQ=255)
                                                                    gccccGGGGTTGTTTGGCTGACACCACACAACAATTTGATTTCGGGGGGCCCGGTCGGAGC‑GGTTTTACCCGCGATTGCGTGGGTGACACCACCGCGGC‑ATGCGCGGGTACA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGc                                                                                  <  2:5344138/147‑1 (MQ=255)
                                                                      cccGGGGATGGATGGCTGAGAACACACAAGCAATTTATTTAGCGGGGCCCTGTCGGAGC‑GGGTTTACCCGCGACTGCGAGGGTGACACCACCGACGC‑TTTCGCGGTTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCgg                                                                                <  2:3569108/149‑1 (MQ=38)
                                                                         ggggATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGGTTAACCCCCAAAGCGCGGGGGACCCCACCGACCC‑CATAGCCGGGAAA‑ACCCCACCAGCACGGCCCGTTGTTCTTTTTGCAGGGCGGCGt                                                                             >  2:3836779/1‑149 (MQ=255)
                                                                             ctggttggCTGACACCACACACCAATTTTATGTGGGGGGGCCCTGTCGGTGG‑GGTTTAACCGGGGATTGCGTGGTTCACACC‑CCCCCGC‑ATTTGGGGGGAAACCCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATg                                                                         <  2:7510920/148‑1 (MQ=255)
                                                                              tgtttggCTGACAACAAAAAACAATTTTTTTTAGGGGGGCCCTGTAGTCGG‑GGTTTTACCCGCTAATGCGTGGGTCACACAACCCCCGC‑TGTCGCGTTAAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATgg                                                                        <  2:2478240/145‑1 (MQ=255)
                                                                                gctggCTGAGAACACACCAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGcc                                                                      <  2:7934893/147‑1 (MQ=255)
                                                                                  tggCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTAACACCGGAAGAGAGGGTGAAAAAAACCAAGC‑AATAGCGGGTGAA‑ACCCCAACGACAGGGTCCGTTGTTCGTTTTTCAAGGGGGAGTGAttgaccg                                                                    >  2:3782527/1‑143 (MQ=255)
                                                                                      tGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGGTTAACCGCCAAAGCGAGGCTGAAACCACCCACCC‑AGTCGCGGGGAAA‑ACCGCTCCAACACGGCCCGTTGTGCTTTTTACAGGGCGGCGTGATGGcccggggc                                                                >  2:4890060/1‑143 (MQ=255)
                                                                                      tGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGGTTAACCCCGAATGGGTGGGTGGCACCCCCCGCGC‑CGTAGCGGGTGAA‑CCCGCGCCGACCGGGCCCCAGGTGCTTTTGCCAGGGCGGGGTGGTGGCCGGgcgc                                                                >  2:2118753/1‑149 (MQ=255)
                                                                                      tGACAAAACACAAGCATTTGTTTTCGCGGGGCCCTGTCGGAGC‑GGGTTAACCCGCTAGGGCGCGGGTCACACCACCGCCGC‑ATTGGGGGTTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGc                                                                <  2:8242886/149‑1 (MQ=255)
                                                                                            cccacaAGCACTTCTTTGCGCGGGGCCCTGGCGGCGC‑GGGTTCCCCCGCCACGGCGCGGGTCCCACCACCGCCGC‑ATTCGCGGTTAAC‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATa                                                          <  1:6444591/147‑1 (MQ=255)
                                                                                              cacaAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAAAGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCGCCAACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCCGGCGCCCCATAcc                                                        >  2:7988697/1‑149 (MQ=38)
                                                                                              cacaAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTAACCCCCAAAGCGAGGGTGGCACCACCCACCC‑AATCGCCGGTAAA‑CCCCCGCCGACACGGCCCGTGGTGCATTTTACAGGGCGGAGTGATGGCCCGTCGCCCCAAAcc                                                        >  2:5067027/1‑149 (MQ=255)
                                                                                              cacaAGCAATTGATTTAGCGGGGCCCAGTAGGAGC‑GGGGTTAAACCCCAAAGAGAGGGTGTCCCCACCCACCC‑CGACGCCCGGAAA‑ACCCCACCAAAACGGCCCGAGGGGCTTTTGACAGGGCGGCGGGAGGGCCCGGCGCCCCaaaac                                                        >  2:873516/1‑145 (MQ=255)
                                                                                                   gCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGGGTTACCC‑CGCAAGCCCGGGTGGCACCACCGGCGC‑CAACGCCGGTGAA‑ACCGCAACCAACGGGCCCCTGGTGCGATTGACAGGGCGGAGTGTTGGGCGGGCGCCCCCAACCCCTTg                                                   >  2:3407197/1‑149 (MQ=255)
                                                                                                            ttcgCGGGGCCCTGTAGGTGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGAGGC‑ATTCGGGGTAAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCt                                          <  2:5569248/146‑1 (MQ=38)
                                                                                                            tgcgCGGGGCCCTTTAGGGGG‑GGGTTTCCCGGCGATTGGGTGGGTGACACCCCCCACGA‑ATTCGGGGGAAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCt                                          <  2:4621930/146‑1 (MQ=255)
                                                                                                               ggggggCCCTGTCGTTGG‑GGGTTTACCGGCCAATGCGTGGGTGACACCACCGCCGC‑TTTCGGGGTTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTgg                                       <  2:6833627/147‑1 (MQ=37)
                                                                                                                  gggCCCTGTAGGAGC‑GGGTTTAACCGCGAATGCGAGGGTGACACCACCCCCGC‑CATCGCGGGGAAA‑ACCCCTCCTACCCGGCCCGGGGTGCTTGTGACACGGCGGACTGATGGGCCGTCGCCCCCTAACTCGTGGCAAAAACTAGGGAt                                    >  2:6329308/1‑149 (MQ=16)
                                                                                                                          tAGGAGC‑GGGTTTCCCCGCGATTGGGTGGGTGACACCACCGCCGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCataat                            <  2:724744/149‑1 (MQ=38)
                                                                                                                              aGC‑GGGGTTACCCGCGAAAGCGAGGGTGAAACCACCCACGC‑AGTAGCCGGTAAA‑CCCGCGCCGACAGGGCCCGTGGTGCTTTTGGCACGGCGGAGTGATGGCCGGTCGCCCCAAACCGCTTGGCAAAAGAGTGGAATACCATAATATGa                        >  2:2408733/1‑149 (MQ=255)
                                                                                                                               gC‑GGGTTTACCCGCGAATGCGAGGGTGACACCCCCGACGC‑ATTCGCGGGTCAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATCATATGat                       >  2:4155820/1‑149 (MQ=255)
                                                                                                                               gC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑ACCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGat                       >  2:1558193/1‑149 (MQ=255)
                                                                                                                                c‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGata                      >  2:5435774/1‑149 (MQ=255)
                                                                                                                                   ggttcccccGCTATTGGGTGGGGGCCACCCCCGACGA‑ATGCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATc                    <  2:1766037/143‑1 (MQ=255)
                                                                                                                                   ggTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATc                    >  1:670714/1‑149 (MQ=255)
                                                                                                                                   ggTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATc                    >  1:3270146/1‑149 (MQ=255)
                                                                                                                                     tttCCCCGCGATGGGGTGTGTGACACCCCCGACGC‑TTTGGGGTTAAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                  <  1:4312244/149‑1 (MQ=255)
                                                                                                                                     tttACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                  >  1:8274333/1‑149 (MQ=255)
                                                                                                                                        ccccGCGACTGCGTGGGGGACACCACCGACGC‑ATTGGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGTAATACCATAATATGATATCCCGTa               <  2:8094194/148‑1 (MQ=255)
                                                                                                                                        aCCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTa               >  2:7172877/1‑149 (MQ=255)
                                                                                                                                         cccGCTATTGCGTGGGTGACACCACCTACTC‑TTTGTGGGTTAAA‑CCCGCTCCTACTGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAg              <  2:5426371/149‑1 (MQ=255)
                                                                                                                                          ccGCGATTGCGCGGGTCACACCACCGACGC‑ATCCGCGGTAAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGa             <  2:6723787/149‑1 (MQ=255)
                                                                                                                                           cgcgAATGCGTCGGTGGTGTCACCCTCGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc            >  1:882681/1‑149 (MQ=25)
                                                                                                                                           cgcgAATGCGTCGGTGGTGTCACCCTCGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc            >  1:8001831/1‑149 (MQ=25)
                                                                                                                                           cgcgAATGCGTCGGTGGTGTCACCCTCGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc            >  1:5102265/1‑149 (MQ=25)
                                                                                                                                           cgcgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc            >  2:3723989/1‑149 (MQ=255)
                                                                                                                                           cgcgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc            >  2:2863608/1‑149 (MQ=255)
                                                                                                                                           cgcgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc            >  2:6015136/1‑149 (MQ=255)
                                                                                                                                           cgcgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc            >  1:5489617/1‑149 (MQ=255)
                                                                                                                                           cgcgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc            >  1:3400523/1‑149 (MQ=255)
                                                                                                                                           cgcgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc            >  1:2195096/1‑149 (MQ=255)
                                                                                                                                            gcgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc           >  2:3020954/1‑149 (MQ=255)
                                                                                                                                            gcgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc           >  1:7675281/1‑149 (MQ=255)
                                                                                                                                             cgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGTTAAC‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt          <  2:1287818/149‑1 (MQ=255)
                                                                                                                                             cgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATCCCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTCGACCt          >  2:4895686/1‑149 (MQ=255)
                                                                                                                                             cgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt          >  2:3096878/1‑149 (MQ=255)
                                                                                                                                             cgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt          >  2:7025954/1‑149 (MQ=255)
                                                                                                                                             cgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt          >  2:5174253/1‑149 (MQ=255)
                                                                                                                                             cgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt          >  2:4443182/1‑149 (MQ=255)
                                                                                                                                             cgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt          >  2:2603616/1‑149 (MQ=255)
                                                                                                                                             cgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt          >  1:7870748/1‑149 (MQ=255)
                                                                                                                                             cgAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt          >  1:2865888/1‑149 (MQ=255)
                                                                                                                                               attGCGTGGGTTACACCACCGACGC‑TTTCGGGGTTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTg        <  2:3475937/147‑1 (MQ=255)
                                                                                                                                               aaTGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCtta        >  2:1703222/1‑148 (MQ=255)
                                                                                                                                                 tGCGAGGTTGACACCACCTCCGC‑TTTCGGGTGTAAA‑CCCGCTCATACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTTATGGCAGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCACGTAGACCTTgtg      <  2:5760978/149‑3 (MQ=255)
                                                                                                                                                   cGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTc    >  1:6161055/1‑149 (MQ=255)
                                                                                                                                                     aGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg  >  1:4625673/1‑149 (MQ=255)
                                                                                                                                                     aGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg  >  2:977985/1‑149 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
TGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGC‑GGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGC‑ATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTG  >  NC_002947/4344920‑4345216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑