Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,882,3180GC29.1% 538.6 / 97.5 262intergenic (‑372/‑28)pucM/puuE5‑hydroxyisourate hydrolase/allantoinase
Reads supporting (aligned to +/- strand):  ref base G (39/146);  new base C (76/0);  total (116/146)
Fisher's exact test for biased strand distribution p-value = 5.91e-37
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 265 total aligned reads displayed.

GGCAGGTTTCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTGGCGAAC  >  NC_002947/4882170‑4882466
                                                                                                                                                    |                                                                                                                                                    
 gcaggTTTCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGc                                                                                                                                                     <  1:1821465/149‑1 (MQ=255)
  caggTTTCTTTCACTGTATTTCCAGGTCGCTGCGAGGCGTCAAAAGGGAAGAAATGCGGAAAAACAGGCTTAAAAAATATTTGATAAGTTGTATAAAATCAGCCCATCCGGTTGTGGGTAATACCGACGCGGCCCGCACACCCACCGCa                                                                                                                                                    <  2:5377601/149‑1 (MQ=255)
  caggTTTCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCa                                                                                                                                                    >  2:2013012/1‑149 (MQ=255)
    ggTTTCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCAca                                                                                                                                                  >  1:3242656/1‑148 (MQ=255)
     gTTTCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTa                                                                                                                                                 <  1:4589458/149‑1 (MQ=255)
     gTTTCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCAcga                                                                                                                                                 >  2:67959/1‑147 (MQ=255)
         cTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGc                                                                                                                                             <  1:4080166/149‑1 (MQ=255)
           tGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCACGAACCcac                                                                                                                                           >  2:7295974/1‑149 (MQ=255)
            gCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATGCAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCACTAAcccccc                                                                                                                                          >  1:6181484/1‑144 (MQ=255)
             cACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACaa                                                                                                                                         <  1:5043196/149‑1 (MQ=255)
             cACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCCCAAACCCACaa                                                                                                                                         >  2:7927288/1‑149 (MQ=255)
              aCTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACaag                                                                                                                                        <  1:629830/149‑1 (MQ=255)
               cTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACaaga                                                                                                                                       <  1:6911481/149‑1 (MQ=255)
                 gTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACaagaag                                                                                                                                     <  2:5920161/149‑1 (MQ=255)
                   aTTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCGCCCGCACCCACAAgaaggc                                                                                                                                   >  1:6005092/1‑148 (MQ=255)
                   aTTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAgaagga                                                                                                                                   <  2:5894440/149‑1 (MQ=255)
                     ttCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAgaaggaag                                                                                                                                 <  1:2856337/149‑1 (MQ=255)
                      tCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCGCCCGCACCCACCAggaggaagc                                                                                                                                >  2:1437566/1‑148 (MQ=255)
                       ccAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGAc                                                                                                                               <  2:1037452/149‑1 (MQ=255)
                        cAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACt                                                                                                                              <  2:4084782/149‑1 (MQ=255)
                            tCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCGCGCCCCCCCCCCGCCCCCACGCACACGAAGGCAGACTGCAg                                                                                                                          >  2:767836/1‑149 (MQ=255)
                            tCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAg                                                                                                                          <  1:1799414/149‑1 (MQ=255)
                               cTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGa                                                                                                                       <  1:698021/149‑1 (MQ=255)
                                tGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAg                                                                                                                      <  2:3514384/149‑1 (MQ=255)
                                 gCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAgc                                                                                                                     <  1:6261702/149‑1 (MQ=255)
                                  cGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAgcg                                                                                                                    <  2:6590180/149‑1 (MQ=255)
                                     ggCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTg                                                                                                                 <  2:5450122/149‑1 (MQ=255)
                                       cGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCTGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGAt                                                                                                               <  1:3853773/149‑1 (MQ=255)
                                        gACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGAtt                                                                                                              <  1:1214238/149‑1 (MQ=255)
                                            aaaGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTAccc                                                                                                          <  1:264687/149‑1 (MQ=255)
                                            aaaGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCCCCAACCCCCAAGAAGGAAGACTGCAGTGAGCGCAGATTAccc                                                                                                          >  1:151774/1‑149 (MQ=255)
                                            aaaGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCCCCCGCCCCCCCCACAAAAGCACAACAAGGAAGACTGCAGTGAGCGCGGGTTAacc                                                                                                          >  1:7916408/1‑149 (MQ=255)
                                            aaaGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCCCCCACCCCCCCCACAAACGCCCCACAACGTAGAATGCAGTGAGCGCAGAGTAccc                                                                                                          >  1:7041455/1‑149 (MQ=255)
                                             aaGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCt                                                                                                         <  2:2597114/149‑1 (MQ=255)
                                              aGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCCCGAAAGCACAAGAAGGAAGACAGCAGTGAGCGCGGATTAcccac                                                                                                        >  1:5903925/1‑147 (MQ=255)
                                               gggAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCACGAACCCACAAGAACGAAGACAGCAGTGAGCGCGGATTACCcgcg                                                                                                       >  2:1230219/1‑149 (MQ=255)
                                                 gaagaaATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCCCCCACCCCCCCCACACAACCACAAGAAGGAAGCCAGCACGGAGCGCGGAGTAcccgcccg                                                                                                     >  2:3088211/1‑144 (MQ=255)
                                                  aagaaATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGa                                                                                                    <  1:2879429/149‑1 (MQ=255)
                                                  aagaaATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGa                                                                                                    <  1:3789248/149‑1 (MQ=255)
                                                       aTGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGa                                                                                               <  1:7807981/149‑1 (MQ=255)
                                                       aTGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGa                                                                                               <  2:248092/149‑1 (MQ=255)
                                                        tGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGAt                                                                                              <  1:2494952/149‑1 (MQ=255)
                                                        tGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGAt                                                                                              <  1:2197797/149‑1 (MQ=255)
                                                         gCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATc                                                                                             <  1:8493809/149‑1 (MQ=255)
                                                          cGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGGCCGCCCCCCCCCCCCACGAAACCACAAGAAGGAAGAATGCAGGGAGCGCGGGTTAACCACGCCACCGGAACg                                                                                            >  1:1327485/1‑149 (MQ=255)
                                                          cGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCACGAACCCACAACAAGGAACACTGCAGTGAGCGCGGATTACACACGCGACCGGAtag                                                                                            >  1:6429853/1‑147 (MQ=255)
                                                           ggAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGGGGCGGGCCCGCCCCCCGCGCGAACGGGCAAGGAGGAATTGTGGAGTGGGCGGTGATTTGCCTCGCGACCTGATAgg                                                                                           >  2:6026005/1‑149 (MQ=255)
                                                           ggAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCgg                                                                                           <  2:1837136/149‑1 (MQ=255)
                                                            gAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGt                                                                                          <  1:1010320/149‑1 (MQ=255)
                                                               aaaCAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTAc                                                                                       <  2:2974226/149‑1 (MQ=255)
                                                                aaCAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACg                                                                                      <  1:7377065/149‑1 (MQ=255)
                                                                aaCAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACg                                                                                      <  1:5469062/149‑1 (MQ=255)
                                                                aaCAGGCTTACAAAAGATTTCAGAAGTTGTAGACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCACTGATTACCCTCGCGACCTGATCGGTTACg                                                                                      <  2:8361316/149‑1 (MQ=255)
                                                                   aGGCTTACAAAAGATTTCAGAAGTTGTATACACTCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGca                                                                                   <  1:6726386/149‑1 (MQ=255)
                                                                    ggCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGcaa                                                                                  <  2:4590165/149‑1 (MQ=255)
                                                                      cTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCCCCCCCCCCCCCCACAAAACCACCACAACGAAGACGGCACGGAGCCCAGCGTACCCACCCGCCCCGAACGGGTACGGcaaca                                                                                >  2:7946933/1‑149 (MQ=255)
                                                                        tACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCCCCCACCCCCCCCACGAAAGCACAAGAAAGAAGAAATCAATGAGCGCTGATTAACCAAGCGACCAGAACGGGTAAGGCaaaaac                                                                              >  1:7412553/1‑149 (MQ=255)
                                                                          cAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAAccc                                                                            <  1:7930576/149‑1 (MQ=255)
                                                                          cAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCACAAACGCACAACAAGGAACACTGCAGTGAGCGCGGATTACCCACGCCACCACCTCCGATACGGCAACAAccc                                                                            >  2:5193105/1‑149 (MQ=255)
                                                                           aaaaGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACcct                                                                           <  1:6338649/149‑1 (MQ=255)
                                                                           aaaaGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACcct                                                                           <  1:5553686/149‑1 (MQ=255)
                                                                                 tttCAGATGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCAc                                                                     <  1:438197/149‑1 (MQ=255)
                                                                                    cAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCCCCCCCCCCCCCCCCCAACCCACCACAAGGAACACAGCAGGGAGCCCGCCTTACCCCCGCCCCCCGAACCGGGACGGCCACAACCcaccccacccc                                                                  >  1:4839715/1‑148 (MQ=255)
                                                                                         gTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCCCGAAAGCACACGAAGGAAGACTGCCGTGAGGGCGGCTTACCCGCGCGACCCGATCGGGTACGGCCACAACCCTCCGCACCCGCAATg                                                             >  2:3285570/1‑149 (MQ=255)
                                                                                             tataCAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGGCCGCCCCCCCCCCCCCCCAAAGCCCCAGAAGGAAGACGGCAGTGAGCGCTGATTAAACACGCGACCAGAACGGTTAAGGCAAAAAACCACCACAACCCCACAGGCCg                                                         >  2:3819882/1‑149 (MQ=255)
                                                                                             tataCAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCg                                                         <  2:7495103/149‑1 (MQ=255)
                                                                                                aCAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCCCCAACGCCCCAGAACGCCGCCAGCCGGGACCGCTGCGGACCCGCGCGCCCCGGGCCGTTACGGCCACAACCCGCCACCCCCGCAAGCGCCCGGc                                                      >  2:5041007/1‑149 (MQ=255)
                                                                                                 cAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCCCCCGAACCCACAAGAAGGAACACAGCACTGTGCGCAGATTACCCGCCCGCCCGGCTCGGTTACGGCAACAACCCACCGCACCCCCAAAGGCCCGGCa                                                     >  2:3927821/1‑149 (MQ=255)
                                                                                                 cAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCa                                                     <  1:6476495/149‑1 (MQ=255)
                                                                                                 cAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCACAAACCCACAACAATGAACACTGCAGTCAGCCCTGATTACCCACCCCACCGGAGCGGTTACGGGAACCACCCACCACCCCCGCCAGGGCCGGGcc                                                     >  2:6921370/1‑148 (MQ=255)
                                                                                                   aTCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCACTAACGCACAAGAAGGAAGACTGCAGTTAGCGCTGATTAACCTCGCGACCGGGACGGGTAAGGCAACAACCCACCTCACCCGCAAAGGCCGGGCAAc                                                   >  2:3304032/1‑149 (MQ=255)
                                                                                                     cAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGc                                                 <  1:5173770/149‑1 (MQ=255)
                                                                                                     cAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCCCAAAAGCACAAGAAGGAAGACTGCAGTGAGCGCGGATTAAACACGCGACCGGAAAGGTTAAGGCAAAAACCCAACACACCCCCCAAGGCCGGGCAAccc                                                 >  2:306233/1‑147 (MQ=255)
                                                                                                       gCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGccc                                               <  1:975990/149‑1 (MQ=255)
                                                                                                        cccATCCGGTGGTGCGACATACCGACGCGGCCCGCCCCCCCCCCGCACTAACGCACAAGAAGGAGCTCTGCACTGGGCGCTGCTTACCCACGCCACCTGATCGGTTACGGCCACAACCCACCACCCCCGCAAAGGCCCGGCCACGcccc                                              >  2:6864297/1‑148 (MQ=255)
                                                                                                         ccATCCGGTGGTGCGACATACCGACGCGGCCCCCCCCCCCCCCCCCCAAACCCCCCACAAGGGAGACAGCAGAGCGCGCGGCGTACCCGCCCGACCAGCTCGGTTGCGGCACCAAACCACCACACCACCCAAGGCCGGGCCACcccccc                                             >  2:8646631/1‑147 (MQ=255)
                                                                                                          cATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACAAAAGCACAAAAAGGAACACAGCAGGGAGCGCAGATAACACAAGCGACCCGAAAGGGTTCGGCAACAAAACACCACACCCGCAAAACCCCGGCAAAGCCCCCa                                            >  2:6704495/1‑149 (MQ=255)
                                                                                                            tCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCCCACGAACCCACCACAAGGAAGACTGCACTGACCGCAGGTTACCCGCCCGACCAGATCGGTTACGGCAACAAACCACCACACACCCAAGGGCCGGGCCACGCCCCCagc                                          >  2:75198/1‑147 (MQ=255)
                                                                                                                 tggtgCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCt                                     <  1:2471334/149‑1 (MQ=255)
                                                                                                                    tgCGACATACCGACGCGGCCCGCCCCCCCCCCCCACGAACGCACAAGAAGGAAGACAGCAGGGAGCGCAGATTAACCACGCGACCTGAGAGGGTACGGCAACAAACCGCCTCACCCGCAAAGGCCGGGCAACGCCCCCAAACCGCTGTc                                  >  2:5384343/1‑149 (MQ=255)
                                                                                                                    tgCGACATACCGACGCGGCCCGCCCACCCCCCCCACAAAACCACAACAAGGAAGACTGCCCTGAGAGCAGATTTACCACGCGACCGGAGCGGTGACCGCCACCACCCACCGCACCCCCACGGGCCCGGCCACCCCCCCAGCGCGCGGTc                                  >  2:165258/1‑149 (MQ=255)
                                                                                                                          aTACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGt                            <  1:669366/149‑1 (MQ=255)
                                                                                                                          aTACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGt                            <  2:4663409/149‑1 (MQ=255)
                                                                                                                          aTACCGACGCGGCCCGACCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGt                            <  2:4334936/149‑1 (MQ=255)
                                                                                                                            aCCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTcc                          <  2:2817275/149‑1 (MQ=255)
                                                                                                                              cGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTc                        <  2:7281845/149‑1 (MQ=255)
                                                                                                                              cGACGCGGCCCGCCCACCCCCCGCACAAAAGCAAAATAAGGAAAAAAACAGTGAGCACTGATTAACCAAGCAAACAGATACGTTAAAGCAACAACACACCACAAACCCAAATGCCGGGCCACCCCCGCAAAGCCCTGTCgttactactc                        >  2:1320095/1‑142 (MQ=255)
                                                                                                                                  gcgGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAAtt                    <  1:4124024/149‑1 (MQ=255)
                                                                                                                                   cgGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTa                   <  2:789992/149‑1 (MQ=255)
                                                                                                                                       ccgcccACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAg               <  2:7041455/149‑1 (MQ=255)
                                                                                                                                         gcccACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGTAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGa             >  1:1939468/1‑149 (MQ=255)
                                                                                                                                              ccccccGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTg        <  2:6286623/149‑1 (MQ=255)
                                                                                                                                              ccccccGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTg        >  1:8329867/1‑149 (MQ=255)
                                                                                                                                              ccccccGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTg        >  1:5179797/1‑149 (MQ=255)
                                                                                                                                              ccccccGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTg        >  2:4267241/1‑149 (MQ=255)
                                                                                                                                               cccccGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTgg       <  2:7412634/149‑1 (MQ=255)
                                                                                                                                               cccccGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTgg       <  2:8212171/149‑1 (MQ=255)
                                                                                                                                                ccccGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTGGc      >  2:1050272/1‑149 (MQ=255)
                                                                                                                                                  ccGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTGGCGa    >  2:6111640/1‑149 (MQ=255)
                                                                                                                                                   cGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTGGCGaa   <  1:7295859/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GGCAGGTTTCTTGCACTGTATTTCCAGGTCGCTGCGAGGCGACAAAAGGGAAGAAATGCGGAAAAACAGGCTTACAAAAGATTTCAGAAGTTGTATACAATCAGCCCATCCGGTGGTGCGACATACCGACGCGGCCCGCCCACCCCCCGCACTAACGCACAAGAAGGAAGACTGCAGTGAGCGCTGATTACCCTCGCGACCTGATCGGTTACGGCAACAACCCTCCTCACCCGCAATGGCCGGGCAACGCCCGCATCGCGCTGTCTTTCGTCCTCAATTACGAGGAAGGTGGCGAAC  >  NC_002947/4882170‑4882466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑