| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,164,101 | G→A | A427T (GCC→ACC) | gtsA → | mannose/glucose ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,164,101 | 0 | G | A | 99.0% | 1801.0 / NA | 492 | A427T (GCC→ACC) | gtsA | mannose/glucose ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (229/257); minor base C (1/4); total (230/262) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 492 total aligned reads displayed.
CGGCCTGCAACCGAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTGCCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGA > NC_002947/1163956‑1164246 | cggcCTGCAACCGAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTAccc < 2:538661/149‑1 (MQ=255) ggcCTGCAACCGAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCa > 2:3151921/1‑149 (MQ=255) tGCAACCGAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTaa > 1:1756342/1‑149 (MQ=255) tGCAACCGAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTaa < 2:3337501/149‑1 (MQ=255) gCAACCGAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAAc < 2:2292862/149‑1 (MQ=255) aCCGAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGc < 1:1167067/149‑1 (MQ=255) ccGAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCt > 2:4875168/1‑149 (MQ=255) cGAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTg > 2:8404269/1‑149 (MQ=255) cGAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTg > 1:3309984/1‑149 (MQ=255) gAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGt > 1:6506395/1‑149 (MQ=255) aGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGtt > 1:7759682/1‑149 (MQ=255) gCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTc > 1:1051031/1‑149 (MQ=255) cATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTcg < 1:8657230/149‑1 (MQ=255) aTGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGTGGGGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCACGGCTACCCAGTAACGGCTGTTcgc > 1:997074/1‑149 (MQ=255) ggCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCgg < 2:2053510/149‑1 (MQ=255) gcACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGGTGTTCGCGGGCa > 1:2610990/1‑149 (MQ=255) gcACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCa < 1:6214211/149‑1 (MQ=255) ggCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCGTGCCCGcga < 1:60964/149‑3 (MQ=255) ggCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTc < 2:6867548/149‑1 (MQ=255) ggCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTc < 1:2780263/149‑1 (MQ=255) ggCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTc < 2:415097/149‑1 (MQ=255) gCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTcc < 1:3988272/149‑1 (MQ=255) gCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTcc < 1:7361787/149‑1 (MQ=255) gCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTcc > 1:6804665/1‑149 (MQ=255) caccacGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCGTGCCCGcgaaca < 2:3042608/149‑6 (MQ=255) caccacGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCa > 2:6263417/1‑149 (MQ=255) caccacGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCa > 1:4645887/1‑149 (MQ=255) accacGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAg > 2:3910713/1‑149 (MQ=255) ccacGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGa < 1:2194960/149‑1 (MQ=255) gCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATggg > 1:238765/1‑149 (MQ=255) cTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGc > 2:4435644/1‑149 (MQ=255) cTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGc > 1:3647676/1‑149 (MQ=255) gTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCt < 1:1612799/149‑1 (MQ=255) tGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTc < 1:7190946/149‑1 (MQ=255) gCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTca < 2:5558252/149‑1 (MQ=255) gCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTca < 2:5105935/149‑1 (MQ=255) gCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTca < 2:6434804/149‑1 (MQ=255) aGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTcacc < 1:4861986/149‑1 (MQ=255) aGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTcacc < 2:1249594/149‑1 (MQ=255) aGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTcacc < 1:5460923/149‑1 (MQ=255) aGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTcacc < 1:7047915/149‑1 (MQ=255) ggCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTcaccac < 1:3095414/149‑1 (MQ=255) gTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTc < 2:7648488/149‑1 (MQ=255) gTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTc < 2:5221737/149‑1 (MQ=255) tcttcGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCt > 1:747251/1‑149 (MQ=255) cttcGATGTGGTGACCAACTACATCAACGAACCCAAGGCCTACCCGGCCGATGCGGCGTAGAAGCTGGCGGCGGCTATCTAGGCTACCCAGTAACGGCTGTTCGCGGGCACGACAGCTCCCAGATGGGCCCTTCTCTCCACTGTTCCTg < 2:2519328/149‑1 (MQ=255) tcGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGt < 1:763450/149‑1 (MQ=255) tcGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGt > 2:1191274/1‑149 (MQ=255) aTGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACAGTTCCTGGTCAt > 2:8118704/1‑149 (MQ=255) tgtgGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATg < 1:8055634/149‑1 (MQ=255) ggtgACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACg < 1:300950/149‑1 (MQ=255) tgACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGcc < 2:8634149/149‑1 (MQ=255) gACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCg > 1:2032332/1‑149 (MQ=255) ccAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGa < 2:6506395/149‑1 (MQ=255) aCTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCt > 1:8511116/1‑149 (MQ=255) cTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCtg < 1:7943728/149‑1 (MQ=255) cTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCtg > 2:4014864/1‑149 (MQ=255) cTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCtg < 1:5609757/149‑1 (MQ=255) aCATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCtgtg < 1:3904614/149‑1 (MQ=255) aCATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCtgtg < 2:6070864/149‑1 (MQ=255) aCATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCtgtg > 1:5760370/1‑149 (MQ=255) tCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGa > 1:5243729/1‑149 (MQ=255) cAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAg < 2:3610724/149‑1 (MQ=255) aCCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGc > 1:5065522/1‑149 (MQ=255) ccccAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCt > 1:1034128/1‑149 (MQ=255) cccAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCtt > 2:6636925/1‑149 (MQ=255) ccAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTg > 2:1849559/1‑149 (MQ=255) ccAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTg < 2:1105635/149‑1 (MQ=255) cAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGc < 2:8249467/149‑1 (MQ=255) aaGGCCGACCCGGCCGATGCGGCGATGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGcc > 2:4718713/1‑149 (MQ=255) aaGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGcc < 2:4673855/149‑1 (MQ=255) aaGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGGTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGcc < 2:1641281/149‑1 (MQ=255) aGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGccc < 2:7412781/149‑1 (MQ=255) aGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTCGGAGCGGGCTTGccc < 2:5713984/149‑1 (MQ=255) ggCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCGGCTCACCACTGTTCCTGGTCATGACGCCGGACCGGTGGGAGCGGGCTTGCCcg < 1:144376/149‑1 (MQ=255) gCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCcgc > 1:6568104/1‑149 (MQ=255) ccGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCcgcg > 1:4200829/1‑149 (MQ=255) cccGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGc > 1:8208605/1‑149 (MQ=255) ccGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGc > 2:4273896/1‑149 (MQ=255) cGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCg < 2:5890230/149‑1 (MQ=255) gATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGt < 2:3476051/149‑1 (MQ=255) gATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCGGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGt < 1:5017161/149‑1 (MQ=255) ggcgccgaagCGGGCGGCGGCTATCCAGGCTACCCAGTAACGGCGGGGCGCGGGCACGCCCGCTCCCAGAGGGGCCCTGCTCACCACGGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCAc < 2:7953717/143‑1 (MQ=255) gcgAAGATGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGTTGGGCCCTGCACACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGGGGGCTTGCCCGCGAAGCGGTGCGTAGCAcc < 1:1862222/149‑1 (MQ=255) cgAAGATGCTGGCGGCGGCTACCACGGCTCCCCCGTACGGGCTGTGGGCGGGCCCGCCCGCCCCCCGCTGGGCCCGGCGCCCCCGTGGGCCGGGTCCTGCCGCCGGCCCTGGGGGCGGGGGCTTGCCCGCGAAGCGGTGCGTAGCACCg < 1:356396/149‑1 (MQ=255) cgAAGAAGCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCg > 2:7228864/1‑149 (MQ=255) agaagCTGGCGGCGGCTATCAAGGCTACCCCGTAACGGCTGTTCGCGGGCACGCCCGCTCCCCGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCa < 2:2466498/149‑1 (MQ=255) aagCTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACt > 1:8324596/1‑149 (MQ=255) cTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTAcc < 1:4326704/149‑1 (MQ=255) cTGGCGGCGGCTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTAcc > 1:6951332/1‑149 (MQ=255) gcggcTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGa < 1:4907933/149‑1 (MQ=255) cggcTATCAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGAt > 2:8552435/1‑149 (MQ=255) cTATCAAGGCTCCCCAGTAACGGGTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCa < 2:2610990/149‑1 (MQ=255) aTCAAGGCTACCCAGTCACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAAt < 2:2717750/149‑1 (MQ=255) cAAGGCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATAc > 1:8846082/1‑149 (MQ=255) cAAGGCTACCCAGTAACGGCTGGTCGCGGGCACGCCCGCTCCCAGATGGGCCCGGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGATTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATAc < 2:7570450/149‑1 (MQ=255) ggCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCTGAGGGGCCCTGCTCACCACTGTTCGTGGTGATGACGCCGGACCTGTGGGAGCGGGCTTGCCGGCGATGCGGTGCGTAGCACCGGCACTACCTCGGGATCCAATACATg < 1:5848018/149‑1 (MQ=255) ggCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATg > 2:4502577/1‑149 (MQ=255) ggCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCATGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATg < 1:7092053/149‑1 (MQ=255) gCTACCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGa > 2:1378469/1‑149 (MQ=255) | CGGCCTGCAACCGAGCATGGCGCACAACATGGCCACCACGCTGGCCGTGCAGGGCGCGTTCTTCGATGTGGTGACCAACTACATCAACGACCCCAAGGCCGACCCGGCCGATGCGGCGAAGAAGCTGGCGGCGGCTATCAAGGCTGCCCAGTAACGGCTGTTCGCGGGCACGCCCGCTCCCAGATGGGCCCTGCTCACCACTGTTCCTGGTCATGACGCCGGACCTGTGGGAGCGGGCTTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGA > NC_002947/1163956‑1164246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |