Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,397,973 G→T 12.1% M1M (ATG→ATT) † ruvC → crossover junction endodeoxyribonuclease RuvC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,397,9730GT12.1% 109.5 / 2.3 33M1M (ATG→ATT) †ruvCcrossover junction endodeoxyribonuclease RuvC
Reads supporting (aligned to +/- strand):  ref base G (26/3);  new base T (2/2);  total (28/5)
Fisher's exact test for biased strand distribution p-value = 9.93e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCCCATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCGGGCTGCATCCGCACCGGCAGCGGTGAGCT  >  NC_002947/1397874‑1398092
                                                                                                   |                                                                                                                       
gCCCATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATc                                                                                     >  1:286649/1‑136 (MQ=255)
 cccATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCa                                                                                    >  1:383355/1‑136 (MQ=255)
                   cAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATTACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTAc                                                                  >  1:192522/1‑136 (MQ=255)
                   cAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATTACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTAc                                                                  >  1:77932/1‑136 (MQ=255)
                   cAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTAc                                                                  >  1:206700/1‑136 (MQ=255)
                   cAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTAc                                                                  >  2:48873/1‑136 (MQ=255)
                        ccTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAg                                                             >  1:313597/1‑136 (MQ=255)
                              ggAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGcc                                                       >  1:49758/1‑136 (MQ=255)
                              ggAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGcc                                                       >  1:387596/1‑136 (MQ=255)
                              ggAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGcc                                                       >  1:313806/1‑136 (MQ=255)
                              ggAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGcc                                                       >  1:22849/1‑136 (MQ=255)
                              ggAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTATTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGcc                                                       >  1:76852/1‑136 (MQ=255)
                               gAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGccc                                                      >  1:216100/1‑136 (MQ=255)
                               gAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGccc                                                      >  1:205457/1‑136 (MQ=255)
                               gAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGccc                                                      >  1:489363/1‑136 (MQ=255)
                                 gCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGt                                                    <  2:383355/136‑1 (MQ=255)
                                   gggTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTgg                                                  >  1:390514/1‑136 (MQ=255)
                                   gggTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTgg                                                  >  1:400470/1‑136 (MQ=255)
                                   gggTTTACCCGCAAAAGGGCCGGTGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTgg                                                  >  2:128246/1‑136 (MQ=255)
                                                 aaGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGCCCCCGGCTCGCGCATCTCCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTgg                                    >  1:422996/1‑136 (MQ=255)
                                                  aGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAg                                                             >  1:41628/1‑110 (MQ=255)
                                                  aGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAg                                                             <  2:41628/110‑1 (MQ=255)
                                                      ccGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATTACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTTCGTGGCGTCg                               <  2:77932/136‑1 (MQ=255)
                                                      ccGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATTACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCg                               <  2:192522/136‑1 (MQ=255)
                                                       cGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCgg                              >  1:43335/1‑136 (MQ=255)
                                                       cGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCgg                              >  1:275536/1‑136 (MQ=255)
                                                                  gTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCGGGCTGCATCCGc                   >  2:465388/1‑136 (MQ=255)
                                                                    agagATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCGGGCTGCATCCGCAc                 >  1:120113/1‑136 (MQ=255)
                                                                           catcatTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCGGGCTGCATCCGCACCGGCAGc          >  2:169145/1‑136 (MQ=255)
                                                                           catcatTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCGGGCTGCATCCGCACCGGCAGc          >  2:38305/1‑136 (MQ=255)
                                                                            atcatTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCGGGCTGCATCCGCACCGGCAGCg         >  2:408071/1‑136 (MQ=255)
                                                                              catTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCGGGCTGCATCCGCACCGGCAGCGGt       >  2:274815/1‑136 (MQ=255)
                                                                                   tttCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCGGGCTGCATCCGCACCGGCAGCGGTGAGCt  <  1:274815/136‑1 (MQ=255)
                                                                                                   |                                                                                                                       
GCCCATTTCAAATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGGTACGCCAGACCGCCCGTGGTTGCGAGTACGTGGCGTCGGGCTGCATCCGCACCGGCAGCGGTGAGCT  >  NC_002947/1397874‑1398092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑