| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,518,611 | C→T | 16.0% | E458E (GAG→GAA) | ftsK ← | DNA translocase FtsK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,518,611 | 0 | C | T | 16.0% | 58.8 / 4.5 | 26 | E458E (GAG→GAA) | ftsK | DNA translocase FtsK |
| Reads supporting (aligned to +/- strand): ref base C (12/9); new base T (2/2); total (14/12) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.77e-01 | |||||||||||
ATCGCGTTCACACCCACCGACTTACCGGAGCCGGTAGTACCGGCCACCAACAGGTGCGGCATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTCGACCACTCGCACACTGGTCACGGCCAGCGAACGC > NC_002947/4518477‑4518746 | atcGCGTTCACACACACCGACTTACCGGAGCCGGTAGTACCGGCCACCAACAGGTGCGGCATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTTGCCCAGCGCCAGCGTGACGGGCGATTTCTGCt > 1:132071/1‑136 (MQ=255) cgTTCACACCCACCGACTTACCGGAGCCGGTAGTACCGGCCACCAACAGGTGCGGCATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCtcgtc > 1:431161/1‑136 (MQ=255) cgTTCACACCCACCGACTTACCGGAGCCGGTAGTACCGGCCACCAACAGGTGCGGCATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGAATTCTGCtcgtc > 2:421723/1‑136 (MQ=255) gACTTACCGGAGCCGGTAGTACCGGCCACCAACAGGTGCGGCATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTgg > 2:397243/1‑136 (MQ=255) gtaCCGGCCACCAACAGGTGCGGCATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAgc > 1:320619/1‑136 (MQ=255) accaACAGGTGCGGCATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGTTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCt > 2:336556/1‑136 (MQ=255) accaACAGGTGCGGCATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGTTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCt > 2:335185/1‑136 (MQ=255) accaACAGGTGCGGCATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCt > 2:316344/1‑136 (MQ=255) accaACAGGTGCGGCATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCt > 1:434777/1‑136 (MQ=255) cATCTTGGCCAGGTCGGTGATCTCCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTg < 1:206059/136‑1 (MQ=255) cATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTg > 2:426330/1‑136 (MQ=255) tGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTAt < 1:381107/136‑1 (MQ=255) tCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGt < 2:480435/136‑1 (MQ=255) ggCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCCCCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCt > 1:278638/1‑136 (MQ=255) ggCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCt > 2:368427/1‑136 (MQ=255) ggCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCt < 2:434777/136‑1 (MQ=255) gCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCtt < 2:132071/136‑1 (MQ=255) ggTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTc < 2:19452/135‑1 (MQ=255) cGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGTTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTc < 1:336556/136‑1 (MQ=255) cGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGTTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTc < 1:335185/136‑1 (MQ=255) cgccagcgTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTCGACCACTCGc < 1:426330/136‑1 (MQ=255) gccagcgTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTCGACCACTCGca < 1:213243/136‑1 (MQ=255) ccagcgTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTCGACCACTCGcac > 1:69815/1‑136 (MQ=255) ccagcgTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTCGACCACTCGcac > 1:283470/1‑136 (MQ=255) tttCTGGTCGTCGTACTGCGGCGTGGCCTGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTCGACCACTCGCACACTGGTCACGGCCAGc < 1:308769/136‑1 (MQ=255) tttCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTCGACCACTCGCACACTGGTCACGGCCAGc < 1:368427/136‑1 (MQ=255) cTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTCGACCACTCGCACACTGTGCACGGCCAGCGAAcgc < 1:332231/136‑1 (MQ=255) | ATCGCGTTCACACCCACCGACTTACCGGAGCCGGTAGTACCGGCCACCAACAGGTGCGGCATCTTGGCCAGGTCGGTGATCACCGGCTTGCCGCCAATGTCGTGGCCCAGCGCCAGCGTGACGGGCGATTTCTGCTCGTCGTACTGCGGCGTGGCCAGCACTTCGGAGAAGCGCACCATCTGGCGGTTTTCGTTGGGTATCTCGATACCTACCGTGGTCTTGCCAGGGATGACCTCGACCACTCGCACACTGGTCACGGCCAGCGAACGC > NC_002947/4518477‑4518746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |