| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1015854 | 0 (0.000) | 24 (1.120) | 16/254 | 0.2 | 87.3% | intergenic (‑81/‑687) | SBRG_Ecoli_galE/prfC | SBRG_Ecoli_galE/peptide chain release factor 3 |
| ? | NC_002947 | = 5067412 | 7 (0.330) | coding (1092/1098 nt) | PP_4459 | transposase | |||||
GTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1015727‑1015854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagtgTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTACCGAGAGGGTTGGGCGTTGTGCAGCGCTAAAA < NC_002947/5067412‑5067279 GTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCT > 1:322923/1‑136 CAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAAC < 2:322923/136‑1 CCACCGGTAACCAGAACTCTCATTATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCT < 2:511394/136‑1 CCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCT < 2:22606/136‑1 CCACCGGTAACCAGAACTCCCATAAATCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCT < 2:15046/136‑1 ACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCG > 2:419686/1‑136 TCTAATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCT > 2:220503/1‑136 CTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTC < 1:122928/136‑1 CGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCT > 1:294435/1‑136 GGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGTCATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGTTCTTGCG < 2:360059/136‑1 GGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCG < 1:543335/136‑1 GGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCG < 2:299554/136‑1 CTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAATCGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCA < 1:122728/136‑1 TAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCG < 2:48586/136‑1 AACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAG < 1:413645/136‑1 AACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAG < 1:329312/136‑1 AGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTA > 1:186257/1‑136 AGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTA > 1:15477/1‑136 CGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCG > 1:532750/1‑98 CGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCG < 2:532750/98‑1 AAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTACCGAGAGG < 1:86594/136‑1 AAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTACCGAGAGG < 1:419686/136‑1 CATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTT > 1:439898/1‑103 CATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTT < 2:439898/103‑1 TGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTACCGAGAGGGTTGGGCGTTGTGCAGCGCTAAAA < 1:220503/136‑1 GTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1015727‑1015854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagtgTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTACCGAGAGGGTTGGGCGTTGTGCAGCGCTAAAA < NC_002947/5067412‑5067279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |