New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1622774 =	10 (0.450)	6 (0.300)	5/234	0.9	48.3%	intergenic (‑38/+135)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC
	?	NC_002947	1622863 =	4 (0.200)					intergenic (‑127/+46)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC

CGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGGGCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCCGGTC  >  NC_002947/1622804‑1622993                                                            |                                                                                                                                   cgatacgatgcttcgtacagatcgcatcggcaggtttagcggcagcttcgcgcccgatcGCGACGCAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAgc                                                        >  2:38504‑M2/60‑136 (MQ=255)  gatacgatgcttcgtacagatcgcatcggcaggtttagcggcagcttcgcgcccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAgcg                                                       >  1:28857‑M2/59‑136 (MQ=255)  gATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGGGCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCAGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAgcg                                                       >  2:289382/1‑136 (MQ=255)       gatgcttcgtacagatcgcatcggcaggtttagcggcagcttcgcgcccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGc                                                                         >  1:322211‑M2/54‑113 (MQ=255)       gatgcttcgtacagatcgcatcggcaggtttagcggcagcttcgcgcccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGc                                                                         <  2:322211‑M2/60‑1 (MQ=255)        aTCTGTACGAAGCATCGTATCGGCTGTGCCAGGGGCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGt                                                 >  2:104998/1‑136 (MQ=255)                          aTCGGCTGTGCCAGGGGCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCAACAGGAGTGGTGGTGAGTCCGACAGGCTAACTGGATCAGGCCGAATTCCTTGGCCAGCGCCATGTAGTCACCCACATGcttct                               >  1:161072/1‑136 (MQ=255)                                     cAGGGGCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCg                    >  2:60905/1‑136 (MQ=255)                                           cagcttcgcgcccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGc              >  1:238579‑M2/18‑136 (MQ=255)                                           cagcttcgcgcccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGc              >  1:39969‑M2/18‑136 (MQ=255)                                               ttcgcgcccgatcGCGACGCAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCtt          >  1:114213‑M2/14‑136 (MQ=255)                                                tcgcgcccgatcGCGACGCAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTc         >  2:508991‑M2/13‑136 (MQ=255)                                                tcgcgcccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTc         >  1:445146‑M2/13‑136 (MQ=255)                                                tcgcgcccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTc         >  1:7024‑M2/13‑136 (MQ=255)                                                tcgcgcccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTc         >  1:433954‑M2/13‑136 (MQ=255)                                                 cgcgcccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCg        >  2:48647‑M2/12‑136 (MQ=255)                                                      ccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCcggg   >  1:337526‑M2/7‑135 (MQ=255)                                                       cgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCCGGTc  >  1:14679‑M2/6‑136 (MQ=255)                                                            |                                                                                                                                   CGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGGGCCGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCGCCGGTC  >  NC_002947/1622804‑1622993

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.