Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3115906	3115947	42	3 [1]	[1] 3	PP_2724/pfpI	hypothetical protein/protease PfpI

GCACTGAGCAGTAGCAGGTTCAGTCTGCCAGTGCCTTGATCAACTGCTCATTGAAGGCGGGGATATCGTCCGGCTGGCGGCTGGTGATGAGGTTGCCATCGACCACCACTTGTTCATCCACCCACGTACCGCCCGCGTTGCGAATGTCATCTTGC  >  NC_002947/3115929‑3116083                    |                                                                                                                                        ccacTGAGCAGTAGCAGGTTCAGTCTGCCAGTGCCTTGATCAACTGCTCATTGAAGGCGGGGATATCGTCCGGCTGGCGGCTGGTGATGAGGTTGCCATCGACCACCACTTGTTCATCCACCCTCGTAccgcccgc                     <  2:353662/135‑1 (MQ=255)                    tCAGTCTGCCAGTGCCTTGATCAACTGCTCATTGAAGGCGGGGATATCGTCCGGCTGGCGGCTGGTGATGAGGTTGCCATCGACCACCACTTGTTCATCCACCCACGTACCGCCCGCGTTGCGAATGTCATCTTGc  >  2:134856/1‑136 (MQ=255)                    tCAGTCTGCCAGTGCCTTGATCAACTGCTCATTGAAGGCGGGGATATCGTCCGGCTGGCGGCTGGTGATGAGGTTGCCATCGACCACCACTTGTTCATCCACCCACGTACCGCCCGCGTTGCGAATGTCATCTTGc  >  2:218233/1‑136 (MQ=255)                    |                                                                                                                                        GCACTGAGCAGTAGCAGGTTCAGTCTGCCAGTGCCTTGATCAACTGCTCATTGAAGGCGGGGATATCGTCCGGCTGGCGGCTGGTGATGAGGTTGCCATCGACCACCACTTGTTCATCCACCCACGTACCGCCCGCGTTGCGAATGTCATCTTGC  >  NC_002947/3115929‑3116083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑