New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1015848 =	0 (0.000)	8 (0.510)	7/262	0.5	88.9%	intergenic (‑75/‑693)	SBRG_Ecoli_galE/prfC	SBRG_Ecoli_galE/peptide chain release factor 3
	?	NC_002947	5066251 =	2 (0.130)					intergenic (‑421/‑70)	PP_4458/PP_4459	opine ABC transporter substrate‑binding protein/transposase

GTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTT  >  NC_002947/1015713‑1015960                                                                                                                                        |                                                                                                                 gaccgaactcgtcggttcagctcaacttgttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaaca                                                                                                                  <  1:324836‑M1/1‑1 (MQ=255) gaccgaactcgtcggttcagctcaacttgttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaaca                                                                                                                  <  1:322992‑M1/1‑1 (MQ=255)      aactcgtaggttcagctcaacttgttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacATTAGt                                                                                                             >  2:136462‑M1/131‑136 (MQ=255)                 aTGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgactca                                                                                                  >  1:184259‑M1/1‑126 (MQ=255)                                      accaccGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattc                                                                             <  2:400500‑M1/136‑32 (MQ=255)                                         accGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattctcg                                                                          >  2:394866‑M1/1‑102 (MQ=255)                                               aaCCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattctcgcgtgcc                                                                    >  1:117299‑M1/1‑96 (MQ=255)                                                   gtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTaa                                                                <  1:252058‑M1/51‑1 (MQ=255)                                                   aGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattctcgcgtgccattg                                                                <  2:247101‑M1/136‑45 (MQ=255)                                                                                       tgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTgcgc                            <  1:304255‑M1/87‑1 (MQ=255)                                                                                                      agctcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGaaaaa             <  1:371567‑M1/102‑1 (MQ=255)                                                                                                        ctcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAg           >  1:409232‑M1/33‑136 (MQ=255)                                                                                                        ctcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAg           >  2:252058‑M1/33‑136 (MQ=255)                                                                                                         tcaaatggaatacttatttttgagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGa          >  2:304255‑M1/32‑136 (MQ=255)                                                                                                                tGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattctcgcgtgcc                                                                    >  1:269662‑M1/1‑31 (MQ=255)                                                                                                                tGCGAAAAGTGTGACATGGAATAAATTAGTGtcctgtctcagataaaacgttctctttattctcgcgtgcc                                                                    <  2:269662‑M1/71‑41 (MQ=255)                                                                                                                 aatacttattttagagacagaacATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGttt  >  2:208908‑M1/24‑136 (MQ=255)                                                                                                                                        |                                                                                                                 GTAATTGCACACAGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGGAATCGTTTACACAAGAATTTAGCCGTTTTTTATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTT  >  NC_002947/1015713‑1015960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.